prot_P-wetherbeei_contig20580.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20580.1.1
Unique Nameprot_P-wetherbeei_contig20580.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length263
Homology
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: A0A1Z9ULH9_9GAMM (Pseudouridine synthase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9ULH9_9GAMM)

HSP 1 Score: 320 bits (820), Expect = 2.920e-107
Identity = 151/248 (60.89%), Postives = 191/248 (77.02%), Query Frame = 0
Query:    6 GERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNASGE 253
            GERI K LAR+ WGSRREIER +   R+++N   A  G  + PGD +QLD+GR+  V    Q L VL Y+KPAGVVCTR DE+ RPTIFE LPR++ GRW+N+GRLDINT+GLLLFTN+GELAHRL HP+Y++DREYA R+FG V ++ML  ++ GV+++GE + F+D+V GEG G+N+W+YCVVQ+GR REVR++WESQ V VSRL+RVRFGN MLP DLR G+ +ELG  L    C LVGL  S E
Sbjct:   15 GERIQKALARSDWGSRREIERLIRDRRIKVNNSLAVLGLSIRPGDSIQLDNGRIFEVGLDKQELQVLLYHKPAGVVCTRSDEEGRPTIFEKLPRVKHGRWLNVGRLDINTTGLLLFTNNGELAHRLTHPKYKIDREYAVRVFGNVNEKMLLTIKKGVEVDGEVYSFNDVVAGEGSGSNKWFYCVVQTGRNREVRKIWESQDVTVSRLMRVRFGNXMLPTDLRPGRNLELGTPLVKEXCTLVGLEDSDE 262          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: A0A3D5DFC2_9GAMM (Pseudouridine synthase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFC2_9GAMM)

HSP 1 Score: 300 bits (768), Expect = 1.350e-99
Identity = 150/242 (61.98%), Postives = 183/242 (75.62%), Query Frame = 0
Query:    5 GGERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALV 246
            GGER+ KVLA+AG+GSRREIE+W+ AGRV +NG     G  V   DR+ LD G+V+R+S GS    V+A NKP GV+CT +D + RPT+   LP+ +  RWI IGRLDINTSGLLLFTN+GELAHRLMHPR+++DREYAARIFGEV    L RL  GV++EGE   FDDIV G G GANRWYYCV++ GR REVRR+WESQ ++V+RLIR RFGN++LP DLR G   E+ G + D LC LV
Sbjct:    7 GGERLQKVLAQAGYGSRREIEKWIAAGRVSVNGVPVSLGTLVVNSDRIALD-GKVVRLSKGSVRTRVIALNKPVGVICTANDPEGRPTVNALLPKRDGVRWIGIGRLDINTSGLLLFTNNGELAHRLMHPRFKIDREYAARIFGEVGARALARLETGVEVEGEICAFDDIVRGNGRGANRWYYCVIRQGRNREVRRMWESQRLQVNRLIRSRFGNVILPRDLRAGDHFEINGVMLDDLCRLV 247          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: A0A523P2I7_9PROT (Pseudouridine synthase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P2I7_9PROT)

HSP 1 Score: 283 bits (723), Expect = 9.140e-93
Identity = 142/245 (57.96%), Postives = 181/245 (73.88%), Query Frame = 0
Query:    7 ERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNAS 251
            +R+HKVLA AG+GSRREIE+W+ AGR+ INGRRAE GA+V   DR+ LD G+ L +   + +  VLA +KP GV+CT  D + RPT    LP+ +  RW+++GRLDINTSGLLLFT++GELAHRLMHPR+ +DREYA R+FG+V    L +L  GV+I+GE + F+D+V+  G GANRWYYCVV+ GR RE+RRLWESQG +VSRLIR RFGNIMLP DL+ G   E+ G +   L  LV    S
Sbjct:    9 KRLHKVLANAGYGSRREIEKWIVAGRLAINGRRAELGAKVVSADRIMLD-GKPLHLRAKTASARVLALHKPEGVICTLRDPRGRPTAHALLPKKDDIRWVSVGRLDINTSGLLLFTDNGELAHRLMHPRHEIDREYAVRVFGDVSVGTLSKLTRGVEIDGETYAFEDVVKRGGRGANRWYYCVVRQGRNREIRRLWESQGCQVSRLIRSRFGNIMLPRDLKAGAYFEVKGIMLTDLYRLVNFTKS 252          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: UPI001E56E81D (pseudouridine synthase n=1 Tax=Marinibactrum halimedae TaxID=1444977 RepID=UPI001E56E81D)

HSP 1 Score: 276 bits (706), Expect = 6.740e-90
Identity = 139/255 (54.51%), Postives = 183/255 (71.76%), Query Frame = 0
Query:    7 ERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNASGEELRSAAPR 261
            E++ KVLAR+G GSRRE+ER +  GR+++NG  A  G RV   +++++D GR++ V   ++A  VL YNKP G +CTR D + R T+F+ LP+++RGRWI++GRLD NTSGLLLFTN GELA+RLMHP   +DREY  RI G+V+D+ML RLR GV +E     F DIVEG G+G N+WYYCVV  GR REVRRLWESQGV+VSRL RVR+GNI +P+ +R GQ +EL       LCA  G+ A  + +   A +
Sbjct:    5 EKLQKVLARSGIGSRREMERAIADGRIKVNGAVATLGDRVTGEEKIEVD-GRLVTVESTAEAPRVLLYNKPEGEICTRSDPEGRKTVFDRLPKLKRGRWISVGRLDFNTSGLLLFTNDGELANRLMHPSSVIDREYLVRIQGQVDDDMLDRLRKGVTLEDGEARFTDIVEGAGEGQNQWYYCVVMEGRNREVRRLWESQGVRVSRLKRVRYGNIFIPSHVRVGQWIELAPKEISDLCATAGVKAPSKRVMKPAEK 258          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: A0A545TM66_9GAMM (Pseudouridine synthase n=1 Tax=Exilibacterium tricleocarpae TaxID=2591008 RepID=A0A545TM66_9GAMM)

HSP 1 Score: 276 bits (706), Expect = 9.990e-90
Identity = 140/248 (56.45%), Postives = 179/248 (72.18%), Query Frame = 0
Query:    7 ERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNASGEE 254
            E++ KVLARAG GSRRE+ER +E GRV++N + A  G RV   D VQLD GR + V+   Q   VL YNKP G +C+R D + RPT+++ LPR++ GRWI++GRLD NTSGLLLFTN GELA++LMHP   +DREY  R+ G+V+D+M QRLR+GV +E     F DIV+G G+G NRW+YCVV  GR REVRRLWESQGVKV+RL RVR+GNI +P+ +R GQ +EL     D LC   G+   G +
Sbjct:   12 EKLQKVLARAGLGSRREMERAIEDGRVKVNHKVARLGDRVTATDTVQLD-GRKVAVAPPQQRSRVLLYNKPEGEICSRADPEGRPTVYDRLPRLKTGRWISVGRLDFNTSGLLLFTNDGELANKLMHPSSVIDREYLVRVQGDVDDDMKQRLREGVLLEDGMARFTDIVDGAGEGRNRWFYCVVMEGRNREVRRLWESQGVKVNRLKRVRYGNIFVPSHVRVGQWIELDAQEVDELCQTAGVTGPGRQ 258          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: UPI001C2D712A (pseudouridine synthase n=1 Tax=Marinobacterium ramblicola TaxID=2849041 RepID=UPI001C2D712A)

HSP 1 Score: 276 bits (706), Expect = 1.630e-89
Identity = 135/236 (57.20%), Postives = 176/236 (74.58%), Query Frame = 0
Query:    7 ERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDAL 242
            E++ KVLAR+G+GSRRE+ER++E GR+ +NG  A+ G RV+ GD+V LD   +  +     A  VL YNKP G VCTRHD + RPT+F++LP +++GRWI IGRLDINT+GLLLFT  GELA+R+MHP   +DREYA R+ GEV DEML+RL+ GV +E    HF D+   +G+GAN+WY+CVV  GR REVRRLWESQG++V+RL RVRFG + LP+D++ G   ELGG   D L
Sbjct:    4 EKLQKVLARSGFGSRREMERFIEEGRIGLNGDLAKLGDRVKEGDQVSLDGRPIQLIFSAESARRVLIYNKPIGEVCTRHDPEGRPTVFDNLPPLKQGRWIVIGRLDINTTGLLLFTTDGELANRMMHPSANIDREYAVRVLGEVSDEMLERLKQGVLLEDGMAHFSDVRYFDGEGANKWYHCVVMEGRNREVRRLWESQGLQVNRLKRVRFGPVFLPSDVKVGTWRELGGKEIDLL 239          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: UPI001A8EFE64 (23S rRNA pseudouridine(2605) synthase RluB n=1 Tax=Motiliproteus sp. SC1-56 TaxID=2799565 RepID=UPI001A8EFE64)

HSP 1 Score: 275 bits (703), Expect = 1.860e-89
Identity = 135/242 (55.79%), Postives = 175/242 (72.31%), Query Frame = 0
Query:    7 ERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGL 248
            E++HKVLARAG GSRRE+ERW+E+GRV++NG RA  G RV P D +++D  RV   +   +   V+ YNKP G VCTRHD + RPT+FE LP+++ GRWI++GRLDINTSGLLLFT  GELA++LMHP   +DREYA R+ GEV DE LQ+L++GV +E     F D+   +G G+N WY+ V+  G+ REVRRLWESQGV+VSRL RVR+G I +P  +  GQ +EL     + LC L GL
Sbjct:    4 EKLHKVLARAGLGSRREMERWIESGRVQVNGERASLGDRVTPADVIKVDGQRVSLGAEAGKGCRVIVYNKPVGEVCTRHDPEGRPTVFEKLPKLKSGRWISVGRLDINTSGLLLFTTDGELANKLMHPSTGIDREYAVRVHGEVSDETLQKLKEGVFLEDGMARFTDVQLFDGTGSNVWYHVVLMEGKNREVRRLWESQGVEVSRLKRVRYGCIFMPKSIASGQWLELSQKELNDLCDLAGL 245          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: A0A1G8UX40_9GAMM (Pseudouridine synthase n=3 Tax=Microbulbifer TaxID=48073 RepID=A0A1G8UX40_9GAMM)

HSP 1 Score: 275 bits (702), Expect = 4.450e-89
Identity = 140/248 (56.45%), Postives = 176/248 (70.97%), Query Frame = 0
Query:    6 GERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNASGE 253
            GE++ KVLARAG GSRRE+ER +EAGRV +NG  A+ G RV   D ++LD  R+       +   V+ YNKP G +C+RHD + RPT+++ LPR+  GRWI++GRLD NTSGLLLFTN GELAHRLMHP   +DREY  RI G+V+DEM QRL  GV ++     F DIVE  G+G NRW+YCVV  GR REVRRLWESQGV+VSRL RVR+GN+ +P+ +R GQ +E+  A  D LC   GL   G+
Sbjct:    9 GEKLQKVLARAGLGSRREMERAIEAGRVTVNGTVAKLGERVTEDDLIELDGKRLQMPE--EERCRVILYNKPVGEICSRHDPEGRPTVYDRLPRLRTGRWISVGRLDFNTSGLLLFTNSGELAHRLMHPSSVIDREYLVRIQGQVDDEMKQRLLTGVLLDDGVARFTDIVESGGEGNNRWFYCVVMEGRNREVRRLWESQGVRVSRLKRVRYGNVFIPSQVRVGQWIEMEPADIDDLCETAGLPKLGQ 254          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: A0A6G8DB73_9GAMM (Pseudouridine synthase n=2 Tax=Microbulbifer TaxID=48073 RepID=A0A6G8DB73_9GAMM)

HSP 1 Score: 275 bits (704), Expect = 1.170e-88
Identity = 140/248 (56.45%), Postives = 176/248 (70.97%), Query Frame = 0
Query:    6 GERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNASGE 253
            GE++ KVLARAG GSRRE+ER +EAGRV +NG  A  G RV   DRV+ D  RV    G    L V+ YNKP G +C+RHD + RPT+++ LPR+  GRWI++GRLD NTSGLLLFTN GELA++LMHP   +DREY  RI G+V+DEM +RL  GV +E     F DIVE  G+G+NRW+YCVV  GR REVRRLWESQGV+VSRL RVR+G++ +P+ +R GQ +E+     D LC   GL   G+
Sbjct:    9 GEKLQKVLARAGLGSRREMERAIEAGRVTVNGEVAGLGERVTDDDRVEFDGKRVA--DGDENRLRVILYNKPIGEICSRHDPEGRPTVYDRLPRLGSGRWISVGRLDFNTSGLLLFTNSGELANKLMHPSSVIDREYLVRIQGQVDDEMKKRLVKGVQLEDGEARFTDIVESGGEGSNRWFYCVVMEGRNREVRRLWESQGVRVSRLKRVRYGSVFIPSHVRVGQWIEMEPKEIDDLCITAGLPKLGQ 254          
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Match: A0A1Q2M615_9GAMM (Pseudouridine synthase n=5 Tax=Microbulbifer TaxID=48073 RepID=A0A1Q2M615_9GAMM)

HSP 1 Score: 273 bits (699), Expect = 1.230e-88
Identity = 136/249 (54.62%), Postives = 179/249 (71.89%), Query Frame = 0
Query:    6 GERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGDRVQLDDGRVLRVSGGSQ-ALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRIERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEVEDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRRLWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNASGE 253
            GE++ KVLARAG GSRRE+ER +EAGRV +NG  A  G RV   D+++ D     R+SGG +  + V+ YNKP G +C+RHD + RPT+++ LPR++ GRWI++GRLD NTSGLLLFTN GELA++LMHP   +DREY  RI G+V+D+M +RL  GV ++     F DIVE  G+G NRW+YCVV  GR REVRRLWESQGV+VSRL RVR+G++ +P+ +R GQ +E+     D LC   GL   G+
Sbjct:    9 GEKLQKVLARAGMGSRREMERAIEAGRVTVNGEVAGLGERVSEDDQIEFDG---KRISGGDENRVRVILYNKPTGEICSRHDPEGRPTVYDRLPRLKSGRWISVGRLDFNTSGLLLFTNSGELANKLMHPSSVIDREYLVRIQGDVDDDMKKRLTKGVSLDDGEARFTDIVESGGEGTNRWFYCVVMEGRNREVRRLWESQGVRVSRLKRVRYGSVFIPSHVRVGQWIEMEPKEIDDLCVTAGLPKLGQ 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20580.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z9ULH9_9GAMM2.920e-10760.89Pseudouridine synthase n=2 Tax=Gammaproteobacteria... [more]
A0A3D5DFC2_9GAMM1.350e-9961.98Pseudouridine synthase n=1 Tax=Gammaproteobacteria... [more]
A0A523P2I7_9PROT9.140e-9357.96Pseudouridine synthase n=1 Tax=Proteobacteria bact... [more]
UPI001E56E81D6.740e-9054.51pseudouridine synthase n=1 Tax=Marinibactrum halim... [more]
A0A545TM66_9GAMM9.990e-9056.45Pseudouridine synthase n=1 Tax=Exilibacterium tric... [more]
UPI001C2D712A1.630e-8957.20pseudouridine synthase n=1 Tax=Marinobacterium ram... [more]
UPI001A8EFE641.860e-8955.7923S rRNA pseudouridine(2605) synthase RluB n=1 Tax... [more]
A0A1G8UX40_9GAMM4.450e-8956.45Pseudouridine synthase n=3 Tax=Microbulbifer TaxID... [more]
A0A6G8DB73_9GAMM1.170e-8856.45Pseudouridine synthase n=2 Tax=Microbulbifer TaxID... [more]
A0A1Q2M615_9GAMM1.230e-8854.62Pseudouridine synthase n=5 Tax=Microbulbifer TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 7..70
e-value: 5.4E-11
score: 52.5
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 7..52
e-value: 5.0E-13
score: 48.5
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 7..61
e-value: 3.52536E-10
score: 53.0222
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 3..60
e-value: 1.6E-18
score: 67.9
IPR000748Pseudouridine synthase, RsuA/RluB/E/FTIGRFAMTIGR00093TIGR00093coord: 75..233
e-value: 8.6E-47
score: 156.9
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 70..200
e-value: 2.3E-17
score: 63.5
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 72..234
e-value: 6.7E-45
score: 154.6
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 138..221
e-value: 6.7E-45
score: 154.6
NoneNo IPR availablePIRSRPIRSR606225-1PIRSR606225-1coord: 70..153
e-value: 8.9E-6
score: 22.9
NoneNo IPR availablePANTHERPTHR21600:SF65RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 6..239
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 6..239
NoneNo IPR availablePROSITEPS50889S4coord: 7..97
score: 14.24229
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 8..99
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 109..123
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 70..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20580contigP-wetherbeei_contig20580:302..1090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20580.1.1mRNA_P-wetherbeei_contig20580.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20580 302..1090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20580.1.1 ID=prot_P-wetherbeei_contig20580.1.1|Name=mRNA_P-wetherbeei_contig20580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
MPDAGGERIHKVLARAGWGSRREIERWVEAGRVRINGRRAETGARVEPGD
RVQLDDGRVLRVSGGSQALHVLAYNKPAGVVCTRHDEQKRPTIFEDLPRI
ERGRWINIGRLDINTSGLLLFTNHGELAHRLMHPRYRVDREYAARIFGEV
EDEMLQRLRDGVDIEGERFHFDDIVEGEGDGANRWYYCVVQSGRQREVRR
LWESQGVKVSRLIRVRFGNIMLPADLRGGQTVELGGALRDALCALVGLNA
SGEELRSAAPRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR036986S4_RNA-bd_sf
IPR000748PsdUridine_synth_RsuA/RluB/E/F
IPR006145PsdUridine_synth_RsuA/RluA
IPR020094TruA/RsuA/RluB/E/F_N
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR018496PsdUridine_synth_RsuA/RluB_CS
IPR020103PsdUridine_synth_cat_dom_sf