mRNA_P-wetherbeei_contig20564.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: A0A836CIK3_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIK3_9STRA) HSP 1 Score: 328 bits (842), Expect = 2.710e-110 Identity = 164/212 (77.36%), Postives = 187/212 (88.21%), Query Frame = 1
Query: 7 MTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
M NLPK LR QL+ + +GSL+LAAEQVS+DGTRKRAY LRDGQ+IESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLT+ EIFEQA+ ++EL KGERLSNVVFMGMGEPLANY V+ A RRIN+ LG+GARHIT+STVGL PRI RLA+ED+QV+LAVSLHAA D ERSALLPVNRRFPL E++ ACK Y++ +GRR+TF
Sbjct: 36 MQNLPKALRQQLEENVQLGSLSLAAEQVSKDGTRKRAYALRDGQLIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTADEIFEQAFRFASELRLKGERLSNVVFMGMGEPLANYANVMEAVRRINSQLGIGARHITISTVGLVPRIQRLAQEDLQVKLAVSLHAANDKERSALLPVNRRFPLAELMDACKAYVDQSGRRMTF 247
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: D7FI54_ECTSI (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI54_ECTSI) HSP 1 Score: 315 bits (806), Expect = 5.870e-105 Identity = 155/214 (72.43%), Postives = 184/214 (85.98%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
+ M N+PK LRA+L TVG+L +AA QVS+DGT+K AYRL DGQ+IESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGF RQL+++EIFEQAY S EL +G+RLSNVVFMGMGEPLANY V+ A RRIN +LG+GARHIT+STVGL PRI RL++E+IQV+LAVSLHAA D ER ALLPVNRRFPL E++ AC++Y++ +GRR+TF
Sbjct: 24 EDMANIPKTLRAKLAKVATVGALEVAARQVSKDGTKKLAYRLSDGQIIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFKRQLSAAEIFEQAYRFSQELQKRGDRLSNVVFMGMGEPLANYKNVMEAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERGALLPVNRRFPLSELMDACREYVDVSGRRMTF 237
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: L1JN17_GUITC (Radical SAM core domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JN17_GUITC) HSP 1 Score: 303 bits (775), Expect = 3.490e-99 Identity = 149/214 (69.63%), Postives = 178/214 (83.18%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
D M +LPK LRA+L +G+L +A EQVS+DGT KRAY+L+DGQ+IESVLMPY DGRRTACISSQAGCAMGCVFCATGQMGFARQLTS EI EQ EL +KGERLSNVV MGMGEPL NY+ V+ A RRIN DLG+GARHIT+STVGL PRI RLA+E++Q++LAVSLHAA+D ER+A++PVN RFPL +++ CK Y+E TGRR++F
Sbjct: 89 DKMQDLPKGLRAKLAEKAVLGNLEIAVEQVSKDGTIKRAYKLKDGQMIESVLMPYDDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSVEILEQVQRFHVELLSKGERLSNVVLMGMGEPLGNYNNVMEAVRRINQDLGIGARHITISTVGLVPRIRRLAEENMQIKLAVSLHAASDEERNAIMPVNLRFPLADLMETCKFYVEKTGRRISF 302
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: A0A7S1DYM6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DYM6_HEMAN) HSP 1 Score: 301 bits (771), Expect = 5.280e-98 Identity = 148/214 (69.16%), Postives = 176/214 (82.24%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
D TN+ K +R L + T+G+L++A +Q S+DGT KRAY L DGQ+IESVLMPY+DGRRTACISSQAGCAMGCVFCATGQMGFARQLT+SEIFEQ EL KGERLSNVV MGMGEPL NY+ VL A RR+N ++G+GARHIT+STVGL PRI RL+KE +QV+LAVSLHAA D ERS ++PVN RFPL E+++AC+DYI TGRR+TF
Sbjct: 148 DDFTNVSKQMREMLKSKATLGTLSIATQQESKDGTIKRAYALPDGQLIESVLMPYNDGRRTACISSQAGCAMGCVFCATGQMGFARQLTASEIFEQVLRFHCELAQKGERLSNVVLMGMGEPLGNYNNVLTAVRRMNEEVGIGARHITISTVGLVPRIQRLSKEGLQVKLAVSLHAANDRERSEMMPVNVRFPLSELMQACRDYIRDTGRRITF 361
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: A0A7S2SP67_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP67_9STRA) HSP 1 Score: 298 bits (762), Expect = 9.950e-98 Identity = 147/214 (68.69%), Postives = 174/214 (81.31%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
D M NLPK LR L+ HTT+GSLT AEQ+S+DGT KRAY L DG +IESVLMPY DGRRTACISSQAGC MGC FCATGQMGF R L+++EIFEQA +LSAEL + ERLSNVVFMGMGEPLANYD VL A RRIN +LG+GARHIT+STVG+ P+I +LA+E Q LAVSLH ATD RS+++P+NRR+ + E++ AC++Y TGRRVTF
Sbjct: 52 DDMANLPKALRQLLEEHTTLGSLTCEAEQISKDGTTKRAYALADGSLIESVLMPYQDGRRTACISSQAGCGMGCKFCATGQMGFVRHLSATEIFEQAQVLSAELQQRDERLSNVVFMGMGEPLANYDNVLEAARRINTELGIGARHITISTVGIVPKILKLAREPSQFTLAVSLHEATDEGRSSIMPINRRYNIDELLGACREYTAITGRRVTF 265
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: UPI001988E7AE (23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI001988E7AE) HSP 1 Score: 295 bits (756), Expect = 3.660e-97 Identity = 145/214 (67.76%), Postives = 174/214 (81.31%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
+ MTNLPK LR L+ T++G L EQ+SRDGT KR YRL DGQ+IESVLMPY D R+TACIS+QAGCAMGCVFCATGQMGFAR LT++EIFEQ + + +L A+GERLSNVV MGMGEP NYD + A RR+ DLG+GARHITVSTVGL P+I R A+E +QV+LA+SLHAATD ER+ALLP+N+R+PL E++ AC+DYIE TGRR TF
Sbjct: 45 EAMTNLPKTLRELLELETSLGKLVKVTEQISRDGTIKRVYRLPDGQLIESVLMPYDDNRQTACISTQAGCAMGCVFCATGQMGFARHLTAAEIFEQVMVFARDLEAEGERLSNVVLMGMGEPFHNYDQSIIAIRRMMDDLGIGARHITVSTVGLVPQIRRFAEEGLQVKLAISLHAATDEERAALLPINKRWPLAELIEACRDYIEKTGRRPTF 258
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: A0A7Y5Q9W6_9CHLR (Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Y5Q9W6_9CHLR) HSP 1 Score: 294 bits (753), Expect = 1.180e-96 Identity = 148/212 (69.81%), Postives = 173/212 (81.60%), Query Frame = 1
Query: 7 MTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
MT+LPK LR +L A +GSL L AEQ+SRDGT KR YRL DGQ+IE+VLM Y D RRTACIS+QAGCAMGCVFCATGQMGFAR L++ EIFEQA + EL A+GERLSNVV MGMGEP NYDA + A RR+ DLG+GARHIT+STVGL P I R A+E +QV+LAVSLHAATD ERSALLPVNRR+PL E++ AC+DY E +GRR++F
Sbjct: 44 MTSLPKGLRDKLAAEVRLGSLELEAEQISRDGTVKRLYRLPDGQLIEAVLMEYDDDRRTACISTQAGCAMGCVFCATGQMGFARHLSADEIFEQAVFFARELEARGERLSNVVLMGMGEPFHNYDASVAAVRRLMNDLGIGARHITISTVGLVPMIRRFAEEGLQVKLAVSLHAATDKERSALLPVNRRYPLNELIDACRDYTERSGRRMSF 255
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: A0A0G4FA14_VITBC (Radical SAM core domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FA14_VITBC) HSP 1 Score: 294 bits (752), Expect = 1.680e-96 Identity = 149/214 (69.63%), Postives = 173/214 (80.84%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
D MTNLPK +R L A T G L +A E+VSRDGT KRAY LRDGQVIESVLMPY DGRRTACISSQAGCAMGCVFCATGQMGFARQL+S+EI EQA + + EL +GERLSNVV MGMGEPLANYD + A RIN DLGVG RHITVSTVGLP RI ++A E QV LAVSLHAA+D +RSAL+P+N++ P+++V++AC Y TGRR++F
Sbjct: 34 DAMTNLPKTMRDDLKASLTFGDLMVADERVSRDGTLKRAYVLRDGQVIESVLMPYKDGRRTACISSQAGCAMGCVFCATGQMGFARQLSSAEIVEQALIFARELHQRGERLSNVVLMGMGEPLANYDNAMEAVERINHDLGVGMRHITVSTVGLPERIKQIADEGRQVTLAVSLHAASDQQRSALIPINKKHPIQQVMQACVYYCGKTGRRISF 247
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: UPI0019B4B354 (23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B4B354) HSP 1 Score: 291 bits (745), Expect = 1.590e-95 Identity = 142/214 (66.36%), Postives = 178/214 (83.18%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
D MTNL K LR +L A TT+G LT AE++S+DGT KR Y+L DGQ+IE+VLM Y DGRRTACIS+QAGCAMGCVFCATGQMGFAR L+++EIFEQA L S +L +G+RLSNVV MGMGEP NYDA ++A R++ +LG+GARHIT+STVGL P+I + A E +QV+LA+SLHAATDAER ALLP+N+R+PL+E++ AC+ YI+ TGRR+TF
Sbjct: 42 DEMTNLSKSLRERLKAETTLGVLTQVAEEISKDGTVKRLYQLSDGQLIEAVLMVYEDGRRTACISTQAGCAMGCVFCATGQMGFARHLSAAEIFEQALLFSGDLERQGDRLSNVVLMGMGEPFHNYDASIQAVHRLSNELGIGARHITISTVGLVPQIRQFADEGMQVKLAISLHAATDAERGALLPINKRWPLEELLDACRYYIDKTGRRITF 255
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Match: A0A2E0L453_9CHLR (Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0L453_9CHLR) HSP 1 Score: 287 bits (735), Expect = 5.560e-94 Identity = 146/214 (68.22%), Postives = 167/214 (78.04%), Query Frame = 1
Query: 1 DGMTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLMPYSDGRRTACISSQAGCAMGCVFCATGQMGFARQLTSSEIFEQAYLLSAELTAKGERLSNVVFMGMGEPLANYDAVLRACRRINADLGVGARHITVSTVGLPPRIDRLAKEDIQVRLAVSLHAATDAERSALLPVNRRFPLKEVVRACKDYIEATGRRVTF 642
D MTNLP LR +L T +G L LA EQ+SRDGT KR YRL DGQ IESVLM Y D RRTACIS+QAGCAMGCVFCATGQMGFAR LT++EIFEQA + EL A+G+RLSNVV MGMGEP NY L A RR+ +DLG+GARHITVSTVGL P I R A E +QV+LA+SLHAATD ER ALLPVNRR+PL E++ AC +Y+ T RR+TF
Sbjct: 42 DAMTNLPARLRERLKTETRLGVLELATEQISRDGTIKRLYRLPDGQFIESVLMIYDDDRRTACISTQAGCAMGCVFCATGQMGFARNLTAAEIFEQAMAFARELEAEGDRLSNVVLMGMGEPFHNYKQSLAAIRRLMSDLGIGARHITVSTVGLVPHIKRFADEGLQVKLAISLHAATDEERGALLPVNRRWPLNELMAACHEYVNKTRRRITF 255 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20564.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20564.1.1 >prot_P-wetherbeei_contig20564.1.1 ID=prot_P-wetherbeei_contig20564.1.1|Name=mRNA_P-wetherbeei_contig20564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp MTNLPKDLRAQLDAHTTVGSLTLAAEQVSRDGTRKRAYRLRDGQVIESVLback to top mRNA from alignment at P-wetherbeei_contig20564:73..1213- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20564.1.1 ID=mRNA_P-wetherbeei_contig20564.1.1|Name=mRNA_P-wetherbeei_contig20564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1141bp|location=Sequence derived from alignment at P-wetherbeei_contig20564:73..1213- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20564:73..1213- >mRNA_P-wetherbeei_contig20564.1.1 ID=mRNA_P-wetherbeei_contig20564.1.1|Name=mRNA_P-wetherbeei_contig20564.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig20564:73..1213- (Phaeothamnion wetherbeei SAG_119_79)back to top |