mRNA_P-wetherbeei_contig2056.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A6H5JQN7_9PHAE (Kin17_mid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQN7_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.910e-44 Identity = 83/120 (69.17%), Postives = 101/120 (84.17%), Query Frame = 1
Query: 301 SEKKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLV-DGPATGTVLEMLEYEDVCK 657
S +KDYWL +GIVVKV+NKRVG G++YKKKAR+RKVV+RY EVKM++SG+RLR+DQD LETVIP VG VL+VNGR RG RA LLS+DT +FS SVR+ DGP GTVL+ +EYED+CK
Sbjct: 359 SSRKDYWLRQGIVVKVMNKRVGGGKYYKKKARLRKVVERYVGEVKMIDSGDRLRVDQDDLETVIPAVGGEVLVVNGRCRGERATLLSLDTEAFSASVRITSDGPDLGTVLDKVEYEDICK 478
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A6G0WJF6_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF6_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.640e-38 Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 1
Query: 301 SEKKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKLDD 666
S +K+ W+H+GI+VKV++K VGDG +YKKK +V +VVD + A+V+ML+SG+ LR+DQD LETVIP VG+ V IVNG RGA A LLS+D ASFSVSV + GP G L+ +EYEDVCK+ D
Sbjct: 271 SNRKENWIHQGIIVKVMDKNVGDGEYYKKKGQVLRVVDTFGAQVRMLDSGDELRVDQDDLETVIPLVGKTVRIVNGIGRGALATLLSIDEASFSVSVLITSGPKKGRTLDKVEYEDVCKVAD 392
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A7S2E1F3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E1F3_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.520e-34 Identity = 69/124 (55.65%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 286 AATASSEKKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCK 657
AA S++K+YWL GIVVKV+N++VG G+FYK K V VV+ + A V+++ES + L++DQD LETVIP+VG V+IVNGR RG+ AELLS+D +F V +R+ DG G VL+ +EYEDVCK
Sbjct: 247 AAEEKSQRKEYWLRPGIVVKVMNQKVGKGKFYKCKGVVESVVEHFIARVRLIESEKVLQIDQDDLETVIPKVGSDVIIVNGRCRGSAAELLSIDVRNFCVKLRVKDGKRRGQVLDAVEYEDVCK 370
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A7S3T4U5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T4U5_9SPIT) HSP 1 Score: 136 bits (342), Expect = 1.030e-33 Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = 1
Query: 307 KKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKLD 663
+KDYWL +VVKVLNK++ +G++YK+K V KV+DRY A V+M SG+ ++LDQD LETVIP+ G RVLIVNG RG+ A+L+S++ F V+V++ DG G +E +EYEDVCKLD
Sbjct: 257 RKDYWLQPDLVVKVLNKQLKEGKYYKQKGTVEKVIDRYTARVRMHASGDLIQLDQDELETVIPKEGSRVLIVNGAYRGSMAQLVSINMDDFCVAVKISDGVHAGRTVERVEYEDVCKLD 375
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A835Z894_9STRA (Antigenic determinant of recA protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z894_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.410e-33 Identity = 68/118 (57.63%), Postives = 91/118 (77.12%), Query Frame = 1
Query: 307 KKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKL 660
K WLH GIVVKV+NK+VG G++YK K VR+V++ + AEVKM++ G+RLR+DQD LETVIP +G+ VLIVNGR RG+ AELL++D +F VR+VDGP GT L ++YE++ KL
Sbjct: 307 KLPNWLHAGIVVKVMNKQVGGGKYYKAKGVVRRVIEDFIAEVKMVDGGDRLRVDQDDLETVIPALGKDVLIVNGRCRGSIAELLALDVDNFCARVRVVDGPQKGTELPKVDYENISKL 424
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: UPI00096B4CD6 (DNA/RNA-binding protein KIN17 n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B4CD6) HSP 1 Score: 135 bits (339), Expect = 3.070e-33 Identity = 64/121 (52.89%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 307 KKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKLDDA 669
+KDYWL EGIVVKV+ K +G+ FYK+K VR+V+D+Y A VK+ ESG++L+LDQ+HLETVIP +G+ V +VNG RG A LLS+D +F V + + G G ++ ++YED+CKLDD+
Sbjct: 263 RKDYWLTEGIVVKVITKSIGE-EFYKQKGVVREVIDKYVAVVKLFESGKKLKLDQEHLETVIPAIGKLVKVVNGAYRGETASLLSIDEKNFCVEIEIASGLLQGRIVTGIQYEDICKLDDS 382
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A6M2EF58_9ROSI (Kin17_mid domain-containing protein n=4 Tax=Populus TaxID=3689 RepID=A0A6M2EF58_9ROSI) HSP 1 Score: 135 bits (340), Expect = 3.090e-33 Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 289 ATASSEKKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKL 660
A S +KDYWL EGI+VKV++K + D +YK+K VRKV+D+Y AE++MLES +LR+DQ+ LETVIPQ+G V IVNG RG+ A LL VDT F V++ G G VL+ +EYED+CKL
Sbjct: 277 AKERSNRKDYWLFEGIIVKVMSKALADKGYYKQKGVVRKVIDKYVAEIEMLESKHKLRVDQEELETVIPQIGVLVKIVNGAYRGSNARLLGVDTEKFCAKVQIEKGIYDGRVLKAVEYEDICKL 400
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A1S3H5D1_LINUN (DNA/RNA-binding protein KIN17 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H5D1_LINUN) HSP 1 Score: 135 bits (339), Expect = 3.940e-33 Identity = 64/118 (54.24%), Postives = 94/118 (79.66%), Query Frame = 1
Query: 307 KKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKL 660
+KDYWLH+GIVVKV+ K++GD +FYKKK V++VVD+YA +KML+SG+++++DQ H+ETVIP +G+ VL+VNG RG+ A LLS++ FS S+++V GP G ++ ++YEDV KL
Sbjct: 276 RKDYWLHKGIVVKVVTKKLGD-KFYKKKGVVKEVVDQYAGVIKMLDSGDKVKVDQAHVETVIPAIGKSVLVVNGAYRGSEATLLSINEKKFSCSIKIVAGPLKGREVDGVQYEDVSKL 392
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A5E4FKS9_PRUDU (PREDICTED: DNA/RNA-binding n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4FKS9_PRUDU) HSP 1 Score: 129 bits (324), Expect = 1.640e-32 Identity = 65/118 (55.08%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 307 KKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKL 660
+KDYWL EGI+VKV++K + D +YK+K VRKV+D+Y E++MLES LR+DQ LETVIPQ+G V IVNG RG+ A+LL+VDT F V++ +G G VL+ +EYED+CKL
Sbjct: 112 RKDYWLCEGIIVKVMSKALADKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIPQIGCLVKIVNGAYRGSNAKLLAVDTDKFCAKVQIENGVYDGRVLKAVEYEDICKL 229
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Match: A0A6P8I3T7_ACTTE (DNA/RNA-binding protein KIN17-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I3T7_ACTTE) HSP 1 Score: 133 bits (335), Expect = 1.730e-32 Identity = 62/119 (52.10%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 307 KKDYWLHEGIVVKVLNKRVGDGRFYKKKARVRKVVDRYAAEVKMLESGERLRLDQDHLETVIPQVGRRVLIVNGRRRGARAELLSVDTASFSVSVRLVDGPATGTVLEMLEYEDVCKLD 663
KKDYWLH+GI+VKV+ K++G+ ++YKKK ++ V RY A VKML+SG+ +++DQ HLETVIP +G+ VL+VNG RG A+++S+D +FSVS+ L +GP G +++ + YED+ KLD
Sbjct: 287 KKDYWLHKGIIVKVMYKKLGE-KYYKKKGVIKSVEGRYVAVVKMLDSGDVIKIDQQHLETVIPAIGKSVLVVNGPHRGLIAKMVSLDERTFSVSIELKEGPQRGRIIDRVAYEDISKLD 404 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2056.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2056.1.1 >prot_P-wetherbeei_contig2056.1.1 ID=prot_P-wetherbeei_contig2056.1.1|Name=mRNA_P-wetherbeei_contig2056.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp MSALDAILVQDAARKRAAAAAAVATAATTAAAAAADQQQQQEAGWSAGRDback to top mRNA from alignment at P-wetherbeei_contig2056:368..1767+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2056.1.1 ID=mRNA_P-wetherbeei_contig2056.1.1|Name=mRNA_P-wetherbeei_contig2056.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1400bp|location=Sequence derived from alignment at P-wetherbeei_contig2056:368..1767+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2056:368..1767+ >mRNA_P-wetherbeei_contig2056.1.1 ID=mRNA_P-wetherbeei_contig2056.1.1|Name=mRNA_P-wetherbeei_contig2056.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig2056:368..1767+ (Phaeothamnion wetherbeei SAG_119_79)back to top |