mRNA_P-wetherbeei_contig20371.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20371.1.1
Unique NamemRNA_P-wetherbeei_contig20371.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A1F4FDM9_9PROT (GTPase Der n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4FDM9_9PROT)

HSP 1 Score: 400 bits (1029), Expect = 2.980e-136
Identity = 194/274 (70.80%), Postives = 232/274 (84.67%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKP++ LVGRPNVGKSTLFNRLTR+RDAIVVDVPGVTRDRHYGEG LG RPY V+DTGGLEP   EGIF EMA+QT+QAIAEADAV+F+TDAR+GL P DR IAE+LR+L+  +WIA NK EGM  + A  +F +L LG P AISAAHGE VREL++ +LE+FPE  E E  E+D  PRVAIVGRPNVGKSTLVN+LVGEERVIAF +PGTT DPI+VPFER GR+YTL+DTAGLRKRG+ G  +E+FS++KTLQAI+ +NVA+ V+D+ EG++
Sbjct:    1 MKPIIALVGRPNVGKSTLFNRLTRSRDAIVVDVPGVTRDRHYGEGRLGGRPYFVIDTGGLEPDAKEGIFVEMARQTEQAIAEADAVVFITDARSGLAPADRVIAERLRRLQKHVWIAANKCEGMAHETATGEFHELALGAPAAISAAHGEGVRELLEALLEKFPEPAEAEAYEKDDHPRVAIVGRPNVGKSTLVNALVGEERVIAFGEPGTTRDPIEVPFERGGRRYTLIDTAGLRKRGRGGAEVERFSIVKTLQAIEAANVAVLVLDALEGVS 274          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A1F4B005_9PROT (GTPase Der n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B005_9PROT)

HSP 1 Score: 395 bits (1015), Expect = 3.830e-134
Identity = 192/274 (70.07%), Postives = 232/274 (84.67%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPV+ LVGRPNVGKSTLFNRLTR+RDAIVVDVPGVTRDRHYGEG LG RP+  +DTGGLEP   E IF EMA+QT+QAIAEADAV+F+TDAR+GL   DR IA +LR+L+ ++W+A NK+EGM  + A  +F +L LG P AISAAHGE VRELI+ VL +FPE  ERE  E+D  PRVA+VGRPNVGKSTLVN+LVGE+RVIAF +PGTT DPI+VPFER GR+YTL+DTAGLRKRGK GE++E+FS++KTLQAI+ SNVA+ V+D+ EG++
Sbjct:    1 MKPVIALVGRPNVGKSTLFNRLTRSRDAIVVDVPGVTRDRHYGEGRLGGRPFFAIDTGGLEPAAKEDIFVEMARQTEQAIAEADAVVFITDARSGLAAGDRVIAGRLRRLQKQVWVAANKSEGMAHETAIGEFHELALGAPAAISAAHGEGVRELIEAVLAKFPESPEREVYEKDDHPRVAVVGRPNVGKSTLVNALVGEQRVIAFAEPGTTRDPIEVPFERAGRRYTLIDTAGLRKRGKAGEDVERFSIVKTLQAIEASNVAVMVLDALEGVS 274          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A521VNM4_9PROT (GTPase Der n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521VNM4_9PROT)

HSP 1 Score: 390 bits (1001), Expect = 7.280e-132
Identity = 191/274 (69.71%), Postives = 231/274 (84.31%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPV+ LVGRPNVGKSTLFNRLTR+RDAIVVDVPGVTRDRHYG+G LG RPY V+DTGGLEP    GI+AEMA+Q++QAIAEADAVI +TDAR+GL   DR IAE+LR+L+  +WIAVNK+EGM  + A  +F +LGLG PVAISAAHGE V EL++ VL  FP   E E  E+D  PRVAIVGRPNVGKSTL+N+LVGEERVIAF +PGTT DPI+VPFER GR+YTL+DTAGLRKRGK GE++E+FS++KTLQAI+ +NV + V+D+ +G++
Sbjct:    1 MKPVIALVGRPNVGKSTLFNRLTRSRDAIVVDVPGVTRDRHYGDGRLGDRPYFVIDTGGLEPAAKAGIYAEMARQSEQAIAEADAVILMTDARSGLAAADRVIAERLRRLQKPVWIAVNKSEGMARETATGEFHELGLGDPVAISAAHGEGVGELMEAVLASFPAGAEAEAPEKDDHPRVAIVGRPNVGKSTLINALVGEERVIAFGEPGTTRDPIEVPFERAGRRYTLIDTAGLRKRGKAGEDVERFSIVKTLQAIEAANVTVLVLDALDGVS 274          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: UPI0019A38201 (Ribosome biogenesis GTPase Der n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A38201)

HSP 1 Score: 389 bits (1000), Expect = 4.100e-131
Identity = 195/275 (70.91%), Postives = 231/275 (84.00%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQ-GENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPV+ LVGRPNVGKSTLFNRLTR RDAIVVD+PGVTRDRHYGEGLLG R   V+DTGGL+P T +GI+ EMA+QT+QAI EADAV+ +TDARAGLTP DR IA++LR+LK R+WIA NK+EGM P+ AAA+F +LGLG P AISAAHG  V  LI+ VL  FPE+ E   D ++  PRVAIVGRPNVGKSTLVN+LVGEERV+ +DKPGTT D IDVPFERNGR+YTLVDTAGLRKRGK  G  +E+FS++KTLQAI+ +NVA+ V+D+ EGI+
Sbjct:    1 MKPVIALVGRPNVGKSTLFNRLTRRRDAIVVDIPGVTRDRHYGEGLLGGRSCIVIDTGGLQPDTDDGIYVEMARQTEQAIVEADAVVLVTDARAGLTPGDRVIADKLRRLKERVWIAANKSEGMDPETAAAEFHELGLGSPSAISAAHGNGVMALIEAVLRPFPEEPEIVDDAKN--PRVAIVGRPNVGKSTLVNALVGEERVLVYDKPGTTRDAIDVPFERNGRRYTLVDTAGLRKRGKSHGAEVERFSIVKTLQAIESANVAVLVLDAVEGIS 273          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A1F3YLY0_9PROT (GTPase Der n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YLY0_9PROT)

HSP 1 Score: 388 bits (996), Expect = 7.690e-131
Identity = 196/275 (71.27%), Postives = 232/275 (84.36%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQ-GENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPV+ LVGRPNVGKSTLFNRLTR RDAIVVDVPGVTRDRHYGEGLLG R   V+DTGGL+P + EGI+ EMA+QT+QAI E+DAVI +TDARAGLTP DR IAE+LR+LK R+WIA NKAEG+ P+ AAA+F +LGLG P AISAAHG  V  LI+ VL+ FP+D E  + E+ + PRVAIVGRPNVGKSTLVN+LVGEERVIAF +PGTT D I+VPFER GR+YTL+DTAGLRKRGK  G  +E+FS++KTLQAI+ SNVA+ V+D+ EGI+
Sbjct:    1 MKPVIALVGRPNVGKSTLFNRLTRRRDAIVVDVPGVTRDRHYGEGLLGGRSCIVIDTGGLQPDSEEGIYVEMARQTEQAIVESDAVILVTDARAGLTPGDRLIAEKLRRLKERVWIAANKAEGLDPETAAAEFHELGLGNPAAISAAHGNGVTALIEAVLQPFPQDVEPVEAEQ-KHPRVAIVGRPNVGKSTLVNALVGEERVIAFGEPGTTRDAIEVPFERGGRRYTLIDTAGLRKRGKSSGAEVERFSIVKTLQAIEASNVAVLVLDAVEGIS 274          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A537CSE2_9PROT (GTPase Der n=5 Tax=Bacteria TaxID=2 RepID=A0A537CSE2_9PROT)

HSP 1 Score: 385 bits (989), Expect = 3.140e-130
Identity = 193/275 (70.18%), Postives = 227/275 (82.55%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRW-PRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            M+PVV LVGRPNVGKSTLFNRLTR+RDAIV DVPGVTRDRHYGEG  G R +  +DTGGLEP   EGIF EMA+Q +QAIAEADAVIF+ D R+G+   DR IA +LRKLK R+W+AVNK EGM  D A A+F +LGLG P AISAAHGE VREL++ VL +FPE  E E++E+D   PRVAIVGRPNVGKSTLVN+LVGEERVIAFDKPGTT DPI+VPFER GR+YTL+DTAGLR+RGK GE  E FS++K LQAI+ +NVA+ ++D+ EG+T
Sbjct:    1 MRPVVALVGRPNVGKSTLFNRLTRSRDAIVHDVPGVTRDRHYGEGSAGGRSFIAIDTGGLEPGAAEGIFFEMARQAEQAIAEADAVIFVVDGRSGVASADREIAARLRKLKSRLWLAVNKTEGMPADSATAEFHELGLGAPAAISAAHGEGVRELMEAVLADFPE--EHEEEEKDSGHPRVAIVGRPNVGKSTLVNALVGEERVIAFDKPGTTRDPIEVPFERAGRRYTLIDTAGLRRRGKTGEGAEFFSIVKALQAIEAANVAVLMLDAPEGVT 273          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A521YUL1_9PROT (GTPase Der n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YUL1_9PROT)

HSP 1 Score: 377 bits (968), Expect = 5.270e-127
Identity = 185/274 (67.52%), Postives = 221/274 (80.66%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPV+ LVGRPNVGKSTLFNRLTRTRDAIV DVPGVTRDRHYGEG LG R +  +DTGGLEP   EGI+ EMA+Q +QAIAEADAV+F+ D RAGLTP DR+IAE+LRKL+  + + VNK EGMQPD A A+F +LGLG P  IS AHGE VREL++ VL  FPE    E+      PRVA+VGRPNVGKSTL+N++VGEERVIAF +PGTT D I+VPFER GR+YTL+DTAG+R+RGK G  +E FS++K LQAI+ SNVAI V+D+ +G+T
Sbjct:    1 MKPVIALVGRPNVGKSTLFNRLTRTRDAIVHDVPGVTRDRHYGEGRLGDRAFIAIDTGGLEPGAAEGIYVEMARQAEQAIAEADAVVFIVDGRAGLTPGDRQIAEKLRKLRTPVHLTVNKTEGMQPDTAVAEFHELGLGAPAPISGAHGEGVRELMEFVLSPFPEARFSEEKPDKGHPRVAVVGRPNVGKSTLINAIVGEERVIAFGEPGTTRDSIEVPFERAGRRYTLIDTAGVRRRGKTGTPVEYFSIVKALQAIEASNVAILVLDALDGVT 274          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A1F4CSW4_9PROT (GTPase Der n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CSW4_9PROT)

HSP 1 Score: 373 bits (958), Expect = 1.780e-125
Identity = 187/274 (68.25%), Postives = 224/274 (81.75%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPVV LVGRPNVGKSTLFNRLTR+RDAIV DVPGVTRDRHYGEG LG + +  +DTGGLEP   +GIF EMA+Q +QAIAEADAVIFL DARAGL P DR IA++LR +K  + +AVNKAEGM P+ A A+F +LGLG P A+SAAHGE VREL+D+ L  FPED  +E D     PRVA+VGRPNVGKSTLVN+LVGEERVIAFD+PGTT D I+VPFER GR+YTL+DTAG+R+RGK    +E FS++K LQAI+ +NVAI ++D+ +G+T
Sbjct:    1 MKPVVALVGRPNVGKSTLFNRLTRSRDAIVHDVPGVTRDRHYGEGRLGGKAFIAIDTGGLEPGAAQGIFVEMARQAEQAIAEADAVIFLVDARAGLVPADRAIAQKLRTMKATVQVAVNKAEGMPPESAVAEFHELGLGAPAALSAAHGEGVRELMDVALSPFPEDTGQE-DLDPGHPRVAVVGRPNVGKSTLVNALVGEERVIAFDQPGTTRDAIEVPFERAGRRYTLIDTAGVRRRGKTDTPVELFSIVKALQAIEAANVAILLLDALDGVT 273          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A536YB74_9PROT (GTPase Der (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YB74_9PROT)

HSP 1 Score: 370 bits (950), Expect = 4.500e-125
Identity = 187/274 (68.25%), Postives = 223/274 (81.39%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPV+ +VGRPNVGKSTLFNRLTR+R+AIV D+PGVTRDRHYGEG  G R +  +DTGG EPR  E +  EMA+Q +QAIAEADAVIF+ DARAGLT  DR IAE+LR+ KP +W+AVNKAEGMQPD A ADF +LG+G P AISAAHGE VREL++ VL  FPED       + R  RVAIVGRPNVGKSTL+N+LVGEERVIAFD+PGTT DPI+VPFER GR+YTL+DTAG+R+RG+ G   E FS++K LQAI+ +NVA+ +ID+ EGIT
Sbjct:    1 MKPVLAVVGRPNVGKSTLFNRLTRSREAIVHDLPGVTRDRHYGEGRAGERRFIAIDTGGFEPRAGERLAVEMARQAEQAIAEADAVIFVVDARAGLTSADRDIAERLRR-KPSVWLAVNKAEGMQPDTAVADFHELGIGQPAAISAAHGEGVRELLEAVLSPFPEDXXXXXXAQ-REARVAIVGRPNVGKSTLINALVGEERVIAFDEPGTTRDPIEVPFERAGRRYTLIDTAGVRRRGRTGTPPEYFSIVKALQAIEAANVAVLLIDAAEGIT 272          
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Match: A0A177QZ56_9PROT (GTPase Der n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177QZ56_9PROT)

HSP 1 Score: 366 bits (939), Expect = 1.430e-122
Identity = 183/274 (66.79%), Postives = 224/274 (81.75%), Query Frame = 1
Query:    1 MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSRPYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDDRRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGESVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGEERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSVLKTLQAIDRSNVAIFVIDSHEGIT 822
            MKPV+ LVGRPNVGKSTLFNRLT++RDAIV D+PGVTRDRHYGEG  G R +  +DTGG EP   EG++ EMA+Q +QAIAEADAVI + D R G TP DR IAE+LR+L    ++AVNK+EGM  DVA A+F  LG+G P AISAAHGE VREL+DLVLE+FP D E E+ ++   PRVAIVGRPNVGKSTLVN+LVGEERVIAFD+PGTT DPI+VPFER GR+YTL+DTAG+R+RG+ G  +E FS++K LQAI+ +NVAI ++D+ +G+T
Sbjct:    1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVHDLPGVTRDRHYGEGRQGERSFIAIDTGGFEPGA-EGVYVEMARQAEQAIAEADAVILVVDTRVGPTPADRAIAEKLRRLATPRYLAVNKSEGMLGDVAVAEFHALGIGHPAAISAAHGEGVRELMDLVLEKFPADGEAEEADQGH-PRVAIVGRPNVGKSTLVNALVGEERVIAFDQPGTTRDPIEVPFERAGRRYTLIDTAGVRRRGRTGTPVEFFSIVKALQAIEAANVAILLLDARDGVT 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20371.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4FDM9_9PROT2.980e-13670.80GTPase Der n=1 Tax=Betaproteobacteria bacterium RI... [more]
A0A1F4B005_9PROT3.830e-13470.07GTPase Der n=1 Tax=Betaproteobacteria bacterium RI... [more]
A0A521VNM4_9PROT7.280e-13269.71GTPase Der n=4 Tax=unclassified Betaproteobacteria... [more]
UPI0019A382014.100e-13170.91Ribosome biogenesis GTPase Der n=1 Tax=Candidatus ... [more]
A0A1F3YLY0_9PROT7.690e-13171.27GTPase Der n=1 Tax=Betaproteobacteria bacterium RB... [more]
A0A537CSE2_9PROT3.140e-13070.18GTPase Der n=5 Tax=Bacteria TaxID=2 RepID=A0A537CS... [more]
A0A521YUL1_9PROT5.270e-12767.52GTPase Der n=2 Tax=unclassified Betaproteobacteria... [more]
A0A1F4CSW4_9PROT1.780e-12568.25GTPase Der n=1 Tax=Betaproteobacteria bacterium RI... [more]
A0A536YB74_9PROT4.500e-12568.25GTPase Der (Fragment) n=1 Tax=Betaproteobacteria b... [more]
A0A177QZ56_9PROT1.430e-12266.79GTPase Der n=1 Tax=Betaproteobacteria bacterium SC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20371contigP-wetherbeei_contig20371:1..822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog640081.Dsui_3138
Preferred nameder
PFAMsKH_dom-like,MMR_HSR1
Model size822
Max annot lvl206389|Rhodocyclales
KEGG koko:K03977
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.43e-123
EggNOG OGsCOG1160@1|root,COG1160@2|Bacteria,1MU9S@1224|Proteobacteria,2VI8D@28216|Betaproteobacteria,2KVNI@206389|Rhodocyclales
DescriptionGTPase that plays an essential role in the late steps of ribosome biogenesis
Cds size822
COG categoryS
BRITEko00000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186197.9086204-CDS-P-wetherbeei_contig20371:0..8221683186197.9086204-CDS-P-wetherbeei_contig20371:0..822Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20371 1..822 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20371.1.1prot_P-wetherbeei_contig20371.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20371 1..822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20371.1.1

>prot_P-wetherbeei_contig20371.1.1 ID=prot_P-wetherbeei_contig20371.1.1|Name=mRNA_P-wetherbeei_contig20371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp
MKPVVVLVGRPNVGKSTLFNRLTRTRDAIVVDVPGVTRDRHYGEGLLGSR
PYHVVDTGGLEPRTTEGIFAEMAKQTQQAIAEADAVIFLTDARAGLTPDD
RRIAEQLRKLKPRMWIAVNKAEGMQPDVAAADFQQLGLGLPVAISAAHGE
SVRELIDLVLEEFPEDDEREQDERDRWPRVAIVGRPNVGKSTLVNSLVGE
ERVIAFDKPGTTIDPIDVPFERNGRKYTLVDTAGLRKRGKQGENIEQFSV
LKTLQAIDRSNVAIFVIDSHEGIT
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mRNA from alignment at P-wetherbeei_contig20371:1..822-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20371.1.1 ID=mRNA_P-wetherbeei_contig20371.1.1|Name=mRNA_P-wetherbeei_contig20371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig20371:1..822- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACCGGTCGTAGTGCTCGTCGGCCGGCCCAACGTCGGCAAGAGCAC CCTGTTCAACCGCCTCACGCGCACGCGCGACGCCATCGTCGTCGACGTGC CCGGCGTCACGCGCGACCGCCACTACGGCGAGGGGTTGCTCGGCAGCCGT CCGTACCACGTGGTGGACACGGGCGGCCTGGAGCCTCGCACGACCGAGGG CATTTTCGCCGAGATGGCGAAGCAGACCCAGCAGGCGATCGCGGAAGCCG ACGCGGTGATTTTCCTCACCGATGCGCGCGCCGGACTGACCCCGGACGAC CGCCGCATCGCCGAGCAGCTGCGCAAGCTGAAGCCGCGCATGTGGATCGC GGTCAACAAGGCGGAGGGCATGCAGCCCGACGTGGCGGCGGCGGATTTCC AGCAGCTCGGCCTCGGCCTGCCGGTGGCGATCTCGGCCGCCCACGGCGAG AGCGTGCGCGAGCTGATCGATCTCGTGCTCGAGGAGTTTCCCGAGGACGA CGAGAGGGAGCAGGACGAGCGCGACCGCTGGCCGCGCGTGGCCATCGTCG GCCGGCCGAACGTCGGCAAGTCGACGCTGGTGAACTCGCTGGTCGGCGAG GAGCGCGTGATCGCGTTCGACAAGCCCGGCACCACCATCGACCCGATCGA CGTGCCTTTCGAGCGCAACGGCCGAAAGTACACGCTGGTCGACACGGCGG GCCTGCGCAAGCGCGGCAAGCAGGGCGAGAACATCGAGCAGTTCTCGGTG CTCAAGACGCTGCAGGCGATCGATCGCTCCAACGTTGCGATCTTCGTGAT CGACTCGCACGAAGGCATCACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20371:1..822-

>mRNA_P-wetherbeei_contig20371.1.1 ID=mRNA_P-wetherbeei_contig20371.1.1|Name=mRNA_P-wetherbeei_contig20371.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig20371:1..822- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACCGGTCGTAGTGCTCGTCGGCCGGCCCAACGTCGGCAAGAGCAC
CCTGTTCAACCGCCTCACGCGCACGCGCGACGCCATCGTCGTCGACGTGC
CCGGCGTCACGCGCGACCGCCACTACGGCGAGGGGTTGCTCGGCAGCCGT
CCGTACCACGTGGTGGACACGGGCGGCCTGGAGCCTCGCACGACCGAGGG
CATTTTCGCCGAGATGGCGAAGCAGACCCAGCAGGCGATCGCGGAAGCCG
ACGCGGTGATTTTCCTCACCGATGCGCGCGCCGGACTGACCCCGGACGAC
CGCCGCATCGCCGAGCAGCTGCGCAAGCTGAAGCCGCGCATGTGGATCGC
GGTCAACAAGGCGGAGGGCATGCAGCCCGACGTGGCGGCGGCGGATTTCC
AGCAGCTCGGCCTCGGCCTGCCGGTGGCGATCTCGGCCGCCCACGGCGAG
AGCGTGCGCGAGCTGATCGATCTCGTGCTCGAGGAGTTTCCCGAGGACGA
CGAGAGGGAGCAGGACGAGCGCGACCGCTGGCCGCGCGTGGCCATCGTCG
GCCGGCCGAACGTCGGCAAGTCGACGCTGGTGAACTCGCTGGTCGGCGAG
GAGCGCGTGATCGCGTTCGACAAGCCCGGCACCACCATCGACCCGATCGA
CGTGCCTTTCGAGCGCAACGGCCGAAAGTACACGCTGGTCGACACGGCGG
GCCTGCGCAAGCGCGGCAAGCAGGGCGAGAACATCGAGCAGTTCTCGGTG
CTCAAGACGCTGCAGGCGATCGATCGCTCCAACGTTGCGATCTTCGTGAT
CGACTCGCACGAAGGCATCACC
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