prot_P-wetherbeei_contig2030.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2030.1.1
Unique Nameprot_P-wetherbeei_contig2030.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length499
Homology
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: D8LST7_ECTSI (Putative type II topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST7_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 8.440e-19
Identity = 63/170 (37.06%), Postives = 94/170 (55.29%), Query Frame = 0
Query:   13 SPAEMLLLDQHNPEFTADPFGAAATATAAASPLRPSA----ALLGKCEQDLFFPATRQKRQRKRLILFPGALGF---VSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAAD---AKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQ 172
            S A+  LL Q +     D    AA+ TA  S   P+A    + L +C+  L     + + + ++L++ PGALG     +GG++GT+      +P +++EFPEGRL+C GRT+    R+FTL AD    +   M CRDVFD  +  S+  W+G  E+NP    LPLP +LQ
Sbjct:   33 SAADAPLLPQESAGSAGDGNNNAAS-TAEPSKYHPAAIAPSSTLRQCD-GLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYMEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQ 200          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A6H5JPN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN3_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.580e-17
Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 0
Query:   71 KRLILFPGALGF---VSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAAD---AKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQANVG------GAAGDGADVRAGVGAA 192
            ++L++ PG LG     +GG++GT+      +P +++EFPEGRL+C GR +    R+FTL AD    +   M CRDVFD  +  S+  W+G  E+NP    LPLP +LQ   G      G+ GD  D   G  AA
Sbjct:  104 RQLMVLPGVLGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRMVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQTLRGEDEQAPGSGGDDGDATGGGDAA 237          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A8J4EXN1_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EXN1_9CHLO)

HSP 1 Score: 82.8 bits (203), Expect = 2.600e-14
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   68 RQRKRLILFPGALGFVSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQ 172
            R+ + L++    L   + GR+GT+  +DS +P ++L+FPEGRL+  G  +    +Y  L     G  ++  DVF+ +LV S+  W+GT EENPE + +P+P  LQ
Sbjct:   19 RKNRYLVIVNALLAPATAGRMGTLARLDSRNPVMYLDFPEGRLKFFGTLVFPRAKYMALRVGV-GPSVMAEDVFENLLVFSKAWWIGTAEENPEEKEMPMPSHLQ 122          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A7S1T5Q1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5Q1_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 2.810e-14
Identity = 37/104 (35.58%), Postives = 67/104 (64.42%), Query Frame = 0
Query:   68 RQRKRLILFPGALGFVSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPAL 171
            R+ + +++F  A+   +GG++GT++ +D+  P ++++FPEGRL+  G  +   + Y  L    K   ++C D+F+ ++V SEV W+GT EENPE R L +P ++
Sbjct:   73 RKNRFMLVFNVAITPKAGGKLGTLKKLDTQTPVMYMDFPEGRLKFFGTLVFPRNNYIMLKIGNKD--ILCEDIFESMVVFSEVWWVGTAEENPEERRLEMPASV 174          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A8J4B493_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B493_9CHLO)

HSP 1 Score: 82.8 bits (203), Expect = 3.290e-14
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   68 RQRKRLILFPGALGFVSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQ 172
            R+ + L++    L   + GR+GT+  +DS +P ++L+FPEGRL+  G  +    +Y  L     G  ++  DVF+ +LV S+  W+GT EENPE + +P+P  LQ
Sbjct:   19 RKNRYLVIVNALLAPATAGRMGTLARLDSRNPVMYLDFPEGRLKFFGTLVFPRAKYMALRVGV-GPSVMAEDVFENLLVFSKAWWIGTAEENPEEKEMPMPSHLQ 122          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A7S3QK99_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QK99_DUNTE)

HSP 1 Score: 85.5 bits (210), Expect = 5.660e-14
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 0
Query:   44 PLRPSAALLGKCEQDLFFPATRQKRQRKRLILFPGALGFVSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQAN 174
            PL  S ALL    QD+   +T +K   + L++    L   + G++G++  +DS  P ++++FP GRL+  G  +   ++Y  L    +   ++C DVF+ ++V SE  W+GT EENPE R LPLP  L  N
Sbjct:   38 PLPLSKALLKSNGQDILKKSTTRKN--RYLLILNCLLAPATAGKLGSLANLDSQEPCMYIDFPNGRLKLFGTLVFPRNKYLLLRIGGQ-QGVMCEDVFENMIVFSESWWVGTAEENPEERQLPLPAELSTN 165          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: W7TM28_9STRA (Dna-binding protein rhl1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM28_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.520e-14
Identity = 37/111 (33.33%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   68 RQRKRLILFPGALGFV-SGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQANVGG 177
            ++ + + L P  +    +GG++GTI  +D++ P ++L+FP+GR++C+GR ++   R   LA + K   + C+D+ + ++V S+V W+GT +ENPE +  P P  +   V G
Sbjct:   68 KKTRYVFLLPAIMTITQAGGKLGTIALMDTETPVLYLDFPQGRMKCQGRIVRPEVRLLPLAFEGKRS-VTCKDLVNTLVVFSKVWWIGTEKENPEEKPWPFPKEMNFQVEG 177          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A8J4B069_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B069_9CHLO)

HSP 1 Score: 82.8 bits (203), Expect = 1.010e-13
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   68 RQRKRLILFPGALGFVSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQ 172
            R+ + L++    L   + GR+GT+  +DS +P ++L+FPEGRL+  G  +    +Y  L     G  ++  DVF+ +LV S+  W+GT EENPE + +P+P  LQ
Sbjct:   19 RKNRYLVIVNALLAPATAGRMGTLARLDSRNPVMYLDFPEGRLKFFGTLVFPRAKYMALRVGV-GPSVMAEDVFENLLVFSKAWWIGTAEENPEEKEMPMPSHLQ 122          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A8J4F0F6_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F0F6_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 2.120e-13
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   68 RQRKRLILFPGALGFVSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQ 172
            R+ + L++    L   + GR+GT+  +DS +P ++L+FPEGRL+  G  +    +Y  L     G  ++  DVF+ +LV S+  W+GT EENPE + +P+P  LQ
Sbjct:   75 RKNRYLVIVNALLAPATAGRMGTLARLDSRNPVMYLDFPEGRLKFFGTLVFPRAKYMALRVGV-GSSVMAEDVFENLLVFSKAWWIGTAEENPEEKEMPMPSHLQ 178          
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Match: A0A8J4EZ38_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EZ38_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 3.680e-13
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 0
Query:   68 RQRKRLILFPGALGFVSGGRIGTIEAVDSDHPTVWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEVAWLGTIEENPEGRVLPLPPALQ 172
            R+ + L++    L   + GR+GT+  +DS +P ++L+FPEGRL+  G  +    +Y  L     G  ++  DVF+ +LV S+  W+GT EENPE + +P+P  LQ
Sbjct:   75 RKNRYLVIVNALLAPATAGRMGTLARLDSRNPVMYLDFPEGRLKFFGTLVFPRAKYMALRVGV-GSSVMAEDVFENLLVFSKAWWIGTAEENPEEKEMPMPSHLQ 178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2030.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LST7_ECTSI8.440e-1937.06Putative type II topoisomerase n=1 Tax=Ectocarpus ... [more]
A0A6H5JPN3_9PHAE1.580e-1739.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J4EXN1_9CHLO2.600e-1437.14Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A7S1T5Q1_9CHLO2.810e-1435.58Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A8J4B493_9CHLO3.290e-1437.14Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A7S3QK99_DUNTE5.660e-1435.88Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
W7TM28_9STRA9.520e-1433.33Dna-binding protein rhl1 n=1 Tax=Nannochloropsis g... [more]
A0A8J4B069_9CHLO1.010e-1337.14Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A8J4F0F6_9CHLO2.120e-1337.14Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A8J4EZ38_9CHLO3.680e-1337.14Uncharacterized protein n=1 Tax=Volvox africanus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..499
IPR038859DNA-binding protein RHL1PANTHERPTHR35698DNA-BINDING PROTEIN RHL1coord: 39..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2030contigP-wetherbeei_contig2030:201..2170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2030.1.1mRNA_P-wetherbeei_contig2030.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2030 199..2170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2030.1.1 ID=prot_P-wetherbeei_contig2030.1.1|Name=mRNA_P-wetherbeei_contig2030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=499bp
PNLNTLFDGAGVSPAEMLLLDQHNPEFTADPFGAAATATAAASPLRPSAA
LLGKCEQDLFFPATRQKRQRKRLILFPGALGFVSGGRIGTIEAVDSDHPT
VWLEFPEGRLRCRGRTIQTGDRYFTLAADAKGDHMVCRDVFDGILVLSEV
AWLGTIEENPEGRVLPLPPALQANVGGAAGDGADVRAGVGAAGTGAGGSS
SSGATAAAGVAAGPAAYRYDLGGAVAAPTDDGADSTFGGDDYLHMDTLLD
DDFLIEEMPSAAPGAPVDAGSTAAGHPSGDARSGGGNSNVGGSSSGGGSS
SGGGSSNGGGGLATAAGLSDRGEASMAADGMSDDEDGGEDAFPGTTGAAG
GGKRGRPVGPDSDGEGPGSSPARKQRRGASALRPIANGIQPRGGGGSDAG
GSSIDGTSCHNGGSDANGDSHGGGGSGGGGGGRRSGSDGDDIQSDSASPS
GRGIDEDDDDDDDNDDTDGLRLRRLRRQRSREPTAHRRLRWNPKVRRSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038859RHL1