mRNA_P-wetherbeei_contig20293.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A3C0TYM1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYM1_9PROT) HSP 1 Score: 117 bits (293), Expect = 4.440e-32 Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGI 255
+E+ E LRF LAL FVLGL+ CSW KRMGL PR++G G RL V+E++++DAKRKLVL+RRDNVEHL++LNGERDLLIE GI
Sbjct: 1 MEIGEILRFTLALGFVLGLVALCSWLAKRMGLAPRVSGNNGSERLGVIEIKALDAKRKLVLVRRDNVEHLLLLNGERDLLIEQGI 85
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A352KGW0_9PROT (Uncharacterized protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KGW0_9PROT) HSP 1 Score: 99.0 bits (245), Expect = 7.380e-25 Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAG-QSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSADIRD-NVTPTPR 300
+E +Y+RF LAL+FVLGLIG C+W GKR GLTPR +RL ++EV+ +DAKRKL+LI RD+ +HL+M+ G+ DL+IE I D N TP+ R
Sbjct: 1 MESFDYVRFLLALVFVLGLIGFCAWLGKRAGLTPRAAKRGNTDNRLVLLEVRPIDAKRKLILIGRDDRQHLLMIGGDNDLVIECNISGDTAPEDGNATPSHR 102
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A1Y5TZK5_9PROT (Flagellar biosynthesis protein FliO n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5TZK5_9PROT) HSP 1 Score: 95.1 bits (235), Expect = 1.790e-23 Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSADIR 276
+E + +++ +AL+ VLGLIG +W GKR G+ PRI+ G RLSV++V ++DAKR+L+L++RD+V+HL+++ GE DL++ESGI + R
Sbjct: 1 MEAISLIQYFVALVVVLGLIGLLAWAGKRFGMAPRISRPGGVRRLSVVDVTTIDAKRRLILVQRDDVQHLLLIGGENDLVVESGIARAEPAR 92
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A2E1EEA8_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E1EEA8_9HYPH) HSP 1 Score: 94.4 bits (233), Expect = 7.030e-23 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSA 267
++ E RF AL F+LGLIG C+ +R+GL P ++ A GQ RL ++EV+++DAK +L+LIRRD EHLI+ GE LLIE GIE+ A
Sbjct: 1 MDFSEIFRFVAALAFILGLIGVCAIVARRLGLAPGVSAAGGQRRLGIVEVKAIDAKHRLLLIRRDGKEHLILTGGETPLLIEGGIEAPA 89
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A3M1JWW5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JWW5_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 9.130e-22 Identity = 45/88 (51.14%), Postives = 64/88 (72.73%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRIT---GAAGQSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGI 255
+E + Y++F +AL+FVL LI W +R GL PR+T A G RL+++EV VDA+R+L+LIRRD+ EHL+M+ GE+D +IESGI
Sbjct: 1 MEAVSYMQFIVALVFVLALIVGLGWAARRFGLAPRVTLSGSAKGDKRLAIVEVLPVDARRRLLLIRRDDTEHLVMIGGEQDTVIESGI 88
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A2N3EJN8_9PROT (Flagellar assembly protein FliO n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A2N3EJN8_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 1.860e-21 Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSADIRDNVTPT 294
++ E RF AL F+LGLIG C+ +++GL P T GQ RL ++EV++VDAK +L+LIRRD EHLI+ GE LLIE+GI++ + T
Sbjct: 1 MDFSEIFRFVAALAFILGLIGVCAILARKLGLVPGATPVGGQRRLGIVEVRAVDAKHRLLLIRRDGKEHLILTGGEHPLLIEAGIDAPVPVETRPAET 98
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: UPI0019145E1B (flagellar biosynthetic protein FliO n=4 Tax=Skermanella TaxID=204447 RepID=UPI0019145E1B) HSP 1 Score: 89.0 bits (219), Expect = 4.700e-21 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSR-LSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSAD 270
+EM YLRF LAL+FVLGLI +WF +R G G+ R L ++EV +DA+RKLVL+RRD VEHL++L DL++ESGI +A+
Sbjct: 1 MEMETYLRFALALVFVLGLIVVAAWFMRRFGYGGAAASRPGRERRLGIVEVAQIDARRKLVLVRRDGVEHLVLLGMNADLVLESGIRPAAE 91
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A6N6VEG3_9HYPH (Uncharacterized protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VEG3_9HYPH) HSP 1 Score: 89.7 bits (221), Expect = 5.020e-21 Identity = 48/99 (48.48%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSADIRDNVTPTP 297
+++ E RF AL F++GLIG C++ KR G G + Q RLSV EV+++DAK +LVLIRRD EHLI++ GE +LLIE+GI++ I + T TP
Sbjct: 5 MDLTEIFRFVAALAFIVGLIGVCAYAAKRFGFATGGFGGSAQKRLSVTEVKALDAKHRLVLIRRDGKEHLILMGGEHNLLIETGIDAPT-IVEAATMTP 102
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: W9H094_9PROT (Uncharacterized protein n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9H094_9PROT) HSP 1 Score: 88.6 bits (218), Expect = 6.850e-21 Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQ-SRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSADIRDNVTP 291
+EM YLRF LAL+FVLGLI +W +R G + G+ RL V+EV +DA+R+LVL+RRD+VEHL++L DL++E+GI + AD P
Sbjct: 1 MEMETYLRFVLALVFVLGLIVVAAWLMRRFGYAGAVAARPGRVRRLGVVEVAQIDARRRLVLVRRDDVEHLVLLGMNNDLVLEAGIRAPADAVPGAAP 98
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Match: A0A2D8RVW5_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D8RVW5_9HYPH) HSP 1 Score: 89.4 bits (220), Expect = 7.110e-21 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 1 LEMMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSRLSVMEVQSVDAKRKLVLIRRDNVEHLIMLNGERDLLIESGIESSA--DIRDNVTPTP 297
++ E RF AL F+LGLIG C+ +R G P + A GQ RL ++EV+++DAK +L+LIRRD EHLI+ GE LLIES I++ A ++ P P
Sbjct: 1 MDFSEIFRFVAALAFILGLIGVCAILARRFGFAPGASPAGGQRRLGIVEVKAIDAKHRLLLIRRDGKEHLILTGGETPLLIESSIDAPAPAEVEQPAQPVP 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20293.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20293.2.1 >prot_P-wetherbeei_contig20293.2.1 ID=prot_P-wetherbeei_contig20293.2.1|Name=mRNA_P-wetherbeei_contig20293.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=98bp MMEYLRFGLALIFVLGLIGACSWFGKRMGLTPRITGAAGQSRLSVMEVQSback to top mRNA from alignment at P-wetherbeei_contig20293:527..826- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20293.2.1 ID=mRNA_P-wetherbeei_contig20293.2.1|Name=mRNA_P-wetherbeei_contig20293.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig20293:527..826- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20293:527..826- >mRNA_P-wetherbeei_contig20293.2.1 ID=mRNA_P-wetherbeei_contig20293.2.1|Name=mRNA_P-wetherbeei_contig20293.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig20293:527..826- (Phaeothamnion wetherbeei SAG_119_79)back to top |