mRNA_P-wetherbeei_contig20281.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A3C0TSV3_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TSV3_9PROT) HSP 1 Score: 149 bits (376), Expect = 1.420e-42 Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 1
Query: 1 MGHTEILLSVFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQPAVIVATHEFCGPDIK-EKFALNNSNRANLCYQRLVLPLSSDGKNVDRILGALV 459
+ +I+ VF YW S +P+RADI+P +++E LPFL +ADV K A GAEI LRL GTHI+R +DLTG P+GG +++W DFV+GRD + Q + I++ HE + K + ++A+L YQRL+LPLS+DG+ VD +LGALV
Sbjct: 13 LDQNKIITQVFTYWRSMCMEDRLPSRADIIPADIKELLPFLLLADVGKLTATGAEINLRLTGTHIDRVLEVDLTGCPIGGFDRNWLDFVIGRDFLEAAEQRSAIMSIHELRLTEKPYPKAIMRPGDKAHLRYQRLILPLSTDGQRVDMLLGALV 166
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A353LTP1_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LTP1_9PROT) HSP 1 Score: 102 bits (255), Expect = 5.900e-25 Identity = 59/141 (41.84%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 52 LKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQPAVIVATHEF-----CGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRILGALV 459
+ G+ +PAR I P E+ LPFLF+ADV+ +++I LRL+GTHIER G DLTG + + F V RD +D Q VI +THE I ++ NN L Y RL+LPLS DG+ VD + G LV
Sbjct: 1 MHGKRLPARGQIFPAEIANLLPFLFLADVEGESSI----RLRLIGTHIERLLGCDLTGCALDARDGFHAAFGVQRDFYDAAAQKLVIGSTHELYYDTALETGIHDQRPANNIEPIMLRYDRLILPLSRDGQRVDMLFGGLV 137
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A166T8D7_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya valderiana BDU 20041 TaxID=322866 RepID=A0A166T8D7_9CYAN) HSP 1 Score: 76.3 bits (186), Expect = 7.870e-15 Identity = 53/146 (36.30%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 28 VFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPV--GGLNKHWPDFVVGRDLFDVVNQPAVIVATHEFCGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRILGALV 459
++ YW S+ G +PARAD+ P ++ + LP L + DVQ + ++ RLVGT + G D TGL V G L WP + +D + AV A DIK L Y+RL+LPLS DGK VD ++G V
Sbjct: 4 LYRYWHSRHDGARLPARADLDPLDIPQLLPHLMLIDVQHEPF---DLRYRLVGTALVDRMGRDTTGLRVEDGYLGDDWPR--IEQDY-----RTAVFAARPVLTRNDIK------GDRGQRLAYERLLLPLSGDGKTVDMLVGGAV 133
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A8J7SZW3_9PROT (PAS domain-containing protein n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7SZW3_9PROT) HSP 1 Score: 75.9 bits (185), Expect = 2.390e-14 Identity = 52/148 (35.14%), Postives = 73/148 (49.32%), Query Frame = 1
Query: 19 LLSVFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQ--PAVIVATHEFCGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRILGAL 456
L ++ YW +K RP+PARADI P E+ LP L + V D RLVGT I +G +LTG + + +G +L V +Q V A +C + A+ L Y+RL+LPLSSDG+ VD +LG +
Sbjct: 26 LRALHAYWSAKRGARPMPARADIDPIEVPRLLPHLMLVAVSDDPL---RFRFRLVGTEIVARYGAELTG-------RELDEIDLGGELGGVRSQYEETVRAAAPTYC------RHAIETRQGKYLRYERLLLPLSSDGRQVDMLLGGV 157
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A3D3UDN9_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UDN9_9PROT) HSP 1 Score: 75.1 bits (183), Expect = 3.340e-14 Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 1
Query: 160 AEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQPAVIVATHEF-----CGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRILGALV 459
+ I LRL+GTHIER G DLTG + + F V RD +D Q VI +THE I ++ NN L Y RL+LPLS DG+ VD + G LV
Sbjct: 2 SSIRLRLIGTHIERLLGCDLTGCALDARDGFHAAFGVQRDFYDAAAQKLVIGSTHELYYDTALETGIHDQRPANNIEPIMLRYDRLILPLSRDGQRVDMLFGGLV 106
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A1Y6C655_9HYPH (PAS domain-containing protein n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6C655_9HYPH) HSP 1 Score: 73.6 bits (179), Expect = 2.580e-13 Identity = 57/154 (37.01%), Postives = 70/154 (45.45%), Query Frame = 1
Query: 13 EILLSVFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVV--------NQPAVIVATHEFCGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRILG 450
E LL VF+YW ++ GR P RADI P ++ E LP + + DV D RLVG+ I + G D TG W D V + D V QP T EF G D K YQRL+LPLSSDG+ VD + G
Sbjct: 44 ETLLRVFDYWRARRGGRRWPRRADIDPVDIPELLPEIILLDVVGDPP---RFRKRLVGSAIVQKEGSDTTG--------RWLDETVNPTIRDEVLRQHREATEQPEGCCYTVEFAGADGKL-----------YSYQRLLLPLSSDGERVDMLFG 175
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: UPI000A3A9EE8 (PAS domain-containing protein n=1 Tax=Oceanibaculum nanhaiense TaxID=1909734 RepID=UPI000A3A9EE8) HSP 1 Score: 72.4 bits (176), Expect = 4.980e-13 Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 16 ILLSVFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQK--DAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQPAVIVATHEFCGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRILG 450
+L + YW S+ + RP+PARADI P ++ LPFL++ DV+ + RLVGT I G D TG H+ D R + + AT + P E+ L+ + R YQRLVLPLS +G++V+ +LG
Sbjct: 21 VLQPLLAYWKSRARDRPLPARADIDPLDIPRLLPFLYLVDVEPLTGGTMPHRFRYRLVGTGIVERNGSDPTG--------HYLDDFENRPFHETIVADYARCATEK--RPVAAERRFLDATGR-RWPYQRLVLPLSENGQDVNMLLG 156
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A0H2MCD4_9PROT (Uncharacterized protein n=1 Tax=Kiloniella spongiae TaxID=1489064 RepID=A0A0H2MCD4_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 1.850e-11 Identity = 44/146 (30.14%), Postives = 67/146 (45.89%), Query Frame = 1
Query: 10 TEILLSVFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQPAVIVATHEFCGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRIL 447
T+ + +++YW SK +PAR DI P E+ ++LP L + DVQKD + RL+GTHI D T + L+ P + + V I + GP + + + L+LPL+ DG NVD +L
Sbjct: 8 TQPIRKLYDYWLSKASLEKLPARHDIDPAEMADFLPHLVLLDVQKDPL---DFRYRLIGTHIAAYLKNDHTNQWMSTLDHQKPPSRIWNNCKQAVETAQPIYPHTPYVGP-----------KQGIVDMEDLILPLARDGINVDMLL 139
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: A0A0M2RGT4_9PROT (Uncharacterized protein n=1 Tax=Kiloniella litopenaei TaxID=1549748 RepID=A0A0M2RGT4_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 3.290e-11 Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 31 FEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQPAVIVATHEFCGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRIL 447
++YW SK +G IP+R DI P E+ +LP + + DVQK+ + RL+GT I D TG + + V ++ V + + A + GP + L + L+LPL+SDGKNV+ ++
Sbjct: 21 YKYWLSKCRGDAIPSREDISPAEMVSFLPNILLLDVQKEPL---DFRFRLIGTRIVPLLNRDYTGELMSTIENLKSPNSVWKNCCKAVERAEPVYAFTPYVGP-----------KKDILDVEDLILPLASDGKNVNMLM 145
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Match: UPI000EA3221C (PAS domain-containing protein n=1 Tax=Kiloniella sp. EL199 TaxID=2107581 RepID=UPI000EA3221C) HSP 1 Score: 67.0 bits (162), Expect = 3.640e-11 Identity = 46/146 (31.51%), Postives = 67/146 (45.89%), Query Frame = 1
Query: 10 TEILLSVFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAAIGAEITLRLVGTHIERTFGIDLTGLPVGGLNKHWPDFVVGRDLFDVVNQPAVIVATHEFCGPDIKEKFALNNSNRANLCYQRLVLPLSSDGKNVDRIL 447
T+ L ++EYW SK +PAR DI P E+ ++LP L + DVQ + RLVGTHI DLT + L+ P + + + V + + GP KE + + L+LPL+ DG VD +L
Sbjct: 8 TQPLKKLYEYWQSKSPQNKLPARHDIDPAEMADFLPHLVLLDVQ---TAPLDFRYRLVGTHIAAYLENDLTNQWMSALHHQKPPSTIWNNCKEAVETALPVYPHTPYVGPK-KEIVEVED----------LILPLARDGVKVDMLL 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20281.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20281.1.1 >prot_P-wetherbeei_contig20281.1.1 ID=prot_P-wetherbeei_contig20281.1.1|Name=mRNA_P-wetherbeei_contig20281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp MGHTEILLSVFEYWCSKLKGRPIPARADIVPGELREYLPFLFIADVQKDAback to top mRNA from alignment at P-wetherbeei_contig20281:466..924+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20281.1.1 ID=mRNA_P-wetherbeei_contig20281.1.1|Name=mRNA_P-wetherbeei_contig20281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig20281:466..924+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20281:466..924+ >mRNA_P-wetherbeei_contig20281.1.1 ID=mRNA_P-wetherbeei_contig20281.1.1|Name=mRNA_P-wetherbeei_contig20281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig20281:466..924+ (Phaeothamnion wetherbeei SAG_119_79)back to top |