mRNA_P-wetherbeei_contig20278.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20278.1.1
Unique NamemRNA_P-wetherbeei_contig20278.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A7X8XKU4_9BURK (Histidine kinase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XKU4_9BURK)

HSP 1 Score: 316 bits (809), Expect = 1.120e-96
Identity = 177/400 (44.25%), Postives = 265/400 (66.25%), Query Frame = 1
Query:    1 DKKGVEYVMHMSPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSPEAAEEPH----QPPQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMD--ILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPESRTDALGRGAREVLGKPFSEGKLAELVR 1182
            +KKGV   +   P  L +  D DK+IQV+TNL+GNA+KFT  GG + +   +  D  E+ V+D+G+GI  +  + IFEKFG+VD+SETREIKG+GLGL IA SIV+AH G ++V+S  G+G++F V +P +    +   +A+           PH    +P   R+VLVVDDE NIRR LR+ILE EG+ VLEA +G++A+  A    P++I LD+ L D  GFE+L++LK+  + + IPVVILSII+D+E+ FR+GA+ FL+KP+DR+ L++RI  L +  S  D  +L+V+DDE+  +A+    + +GF+V      E+AL  + +  PA+++LDL +P +SG++ + EL+ +     IP++VLT + P+  T ALG GA  +L KPFS  +L +LVR
Sbjct:  426 EKKGVHLEVSHRPGML-VRGDRDKLIQVLTNLLGNAIKFTSEGGRIRVAAWKGEDHHEMTVEDTGIGIPEKFLEVIFEKFGRVDSSETREIKGTGLGLSIAHSIVQAHSGEISVESTEGQGSTFRVVLPALKQMERPR-MAL-----------PHRLLSEPGTGRTVLVVDDEENIRRLLRYILEGEGFRVLEAQNGRQAMDMALENHPDVITLDIMLPDKDGFEVLKDLKENPELQAIPVVILSIIEDREKVFRMGAAGFLSKPIDRDALLNRIHELTAGISLKDREVLLVDDDEATLQALTATFQARGFRVRTARDGEKALGEIARKHPAIVVLDLNMPRMSGHEVIRELKRNSQTAAIPILVLTGSPPDEHTHALGMGADALLTKPFSLDELTDLVR 812          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A3M1LC25_9CHLR (Response regulator (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LC25_9CHLR)

HSP 1 Score: 278 bits (710), Expect = 1.420e-82
Identity = 165/404 (40.84%), Postives = 245/404 (60.64%), Query Frame = 1
Query:    1 DKKGVEYVMHMSPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSPEAAEEPHQP-----PQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPES---RTDALGRGAREVLGKPFS-EGKLAELVRM 1185
            ++KG+     ++P   P++ DS ++IQV+TNLV NA ++TP GG + +   +  +   + V+D+G+GIAP+  ++IF++F + D    +EI+G+GLGL I +S+VE H G + V+S+LG+G++F   +P   +   EAP   P E   EAA E  QP     P+ R VL+V+D+ +I   L H LE  GY  + A  G+ AL  A R  P+LI LD+RL DM GFE+L+ LK+ + T DIPVVI+SI+QDK++G RLGA D+L KP+D  +L+  + +++ S     ILVV+DD      ++ +L+ +GF V      EE L    +  P LILLDL +PG+ G   LT L+   T   IPV+V+TA+  E    R   L  GA   L KPF+ E  L E+ R+
Sbjct:  394 EEKGLRLRSQVAPDLPPVWGDSARIIQVLTNLVSNAYQYTPPGGEITVEAERQGEMVLIRVRDTGIGIAPQDQEKIFDRFFRADHPLVQEIRGTGLGLSIVKSLVEMHGGEIWVESELGQGSTFSFTLPIAQEG--EAPPPAPPEDEGEAAHE--QPDNGRGPRVRRVLIVEDDPDIANLLGHHLEGSGYQTIIAHRGQTALTLARRLHPDLITLDIRLPDMDGFELLQSLKEDASTTDIPVVIVSILQDKQKGLRLGAVDYLTKPIDEGRLLHVVDQILESKGS--ILVVDDDRDTVALLEQVLQERGFTVLAAYRGEEGLALAREHQPDLILLDLKIPGLDGYTTLTRLKEDPTTREIPVVVMTASLTEPERHREKVLALGASHFLTKPFAIEMLLEEIERL 791          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A7V3HI67_9CHLR (GAF domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3HI67_9CHLR)

HSP 1 Score: 283 bits (723), Expect = 1.440e-81
Identity = 168/403 (41.69%), Postives = 250/403 (62.03%), Query Frame = 1
Query:    4 KKGVEYVMHMSPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPF-VADSAKEAPV-AIPGEPSPEAAEEPHQPPQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPS---QMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPE---SRTDALGRGAREVLGKPFS-EGKLAELVRM 1185
            +KG+ Y + +     P+ AD D++ Q++TNLVGNA ++TP GG V +T R V D  ++ VKD+G+GIAPE   RIF++F + D    R+  G+GLGL I ++ VE H G + V S+LG+G++F   +P  V + A+E PV A+P E             ++  +LVV+D+ ++   +RH LE EGY+V  A +GK+AL  A   KP+LI LD+RLGDM GFE+LE+LK+   T  IPV+++S++ + E+GF LGA+D++ KP + E+LI  I  ++ +        ILVV+D+  V   +   L    FKV  V S EEAL A+ +  P LILLDL +PG+ G + L  LR  ++  +IPVIV+TA+  +   +R   LG GA+  L KPFS E  + E+ R+
Sbjct: 1926 EKGLNYTVDIPDDLPPLRADKDRLAQILTNLVGNACQYTPEGGSVLVTARAVGDMVQIDVKDTGIGIAPEDLPRIFDRFFRADHPMVRDTAGTGLGLSITKAFVEMHGGRIWVQSELGKGSTFSFTIPIAVEEKAEEIPVQALPKE------------EKKGKILVVEDDQDVAELIRHSLEAEGYEVTIALTGKDALWLAQELKPDLITLDIRLGDMDGFELLEQLKKGEATASIPVIVVSVVAEPEKGFALGAADYIVKPFEEERLILSIRGILEALDGGRYNKILVVDDEPDVVSWLVEALSKYNFKVRGVYSGEEALRAVKEDEPHLILLDLKMPGMDGYEVLRRLRADQSTRHIPVIVITASPVDKEKTRVKVLGLGAKRFLVKPFSIETLVGEIKRV 2316          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A497B635_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497B635_9CHLR)

HSP 1 Score: 279 bits (714), Expect = 2.270e-80
Identity = 158/402 (39.30%), Postives = 246/402 (61.19%), Query Frame = 1
Query:    1 DKKGVEYVMHMSPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSPEAAEEPHQPPQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISS--PSQMD-ILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPE---SRTDALGRGAREVLGKPFS-EGKLAELVRM 1185
            ++K + Y++++     P++AD D++ Q++TNL+ NA  +T  GG V++  R V D  +V V D+G+GIAPE   ++F++F + D    R+  G+GLGL I ++ VE H G + V S LG+G++F   +P     A            PE  E P    + R +LVVDD+ ++   +RH LE+EGY+   A SGK+AL  A    P+LI LD+ LGDM GFE+LE+LK    T  IPV+I+S++ ++E+GF LGA+D++ KP + E+L+  +  L+ S    ++D ILVV+DD+ +   +  +L    ++V  V S EEAL A+ +  P LILLDL +PG+ G + L  LR  ET  +IP+IV+TA+  +   ++   LG GA+ +L KPFS E  + E+ R+
Sbjct: 1775 EEKSLNYIVNIPDDLPPLWADRDRLNQILTNLISNACNYTTEGGTVKVEARVVDDKVQVDVTDTGIGIAPEDLPKVFDRFFRADNPVVRQSPGTGLGLSITKAFVEMHGGEIWVRSQLGKGSTFSFTIPIAEAEA------------PEKVERPTPVRERRKILVVDDDRDVAELIRHNLEKEGYEATIALSGKDALWLAKELSPDLITLDVLLGDMDGFEVLEQLKADEATASIPVIIVSVLAEQEKGFALGAADYVIKPFEEERLLRSVRNLLESLDGGKLDKILVVDDDKDITGWLVEVLSRHNYRVRGVYSGEEALKAVEEEPPDLILLDLKMPGMDGYEVLKRLRAQETTRHIPIIVITASPVDKEKAKVKVLGLGAKRLLVKPFSAETLVGEIKRV 2164          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A7V2RG79_9CHLR (Histidine kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7V2RG79_9CHLR)

HSP 1 Score: 268 bits (684), Expect = 7.560e-79
Identity = 156/400 (39.00%), Postives = 255/400 (63.75%), Query Frame = 1
Query:    4 KKGVEYVMHMSPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQV-----RDSAEVV--VKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSPEAAEEPHQPPQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPES-RTDALGRGAREVLGKPFSEGKLAELV 1179
            +K +E     +P    +F D D+++QVVTNL+ NA+KF P  G + + T  V     +DS+ VV  V DSG+GIAPE    +FEKF QV  + T + KG+GLGLPI++ I+E + G + V+S L +G++F   +P VA   +E+ +  P E   E   E  +  + + +LVVDDE NIR FL H  +++GY V  AA+GKEAL  A ++ P+LI LD+++ D++GF++   LK  +DT+DIP++ILS+I+DK++ ++LG +D++ KPVD E+L++++++LIS  ++ +IL+V+DD+S+ ++++  LE +G+ V       +AL  + K  P LILLD+M+P I G + +  L+      +I ++++T    +  R  AL  GA +++ K  +  KL E V
Sbjct:  390 EKTLEVSFTETPNLPNVFCDKDRLVQVVTNLLSNAIKFNPESGEITVKTEVVAEKGKQDSSMVVTSVSDSGIGIAPEDFGAVFEKFKQVGDTLTDKPKGTGLGLPISKEIIEHYGGEIWVESQLRKGSTFFFSLP-VAKRIEESEMPEPHEE--EEVVEVIKNKKGKKILVVDDEENIRIFLSHEFKRKGYTVFVAANGKEALDMARKQHPDLITLDVQMPDISGFDVTSVLKNDNDTKDIPILILSVIEDKDRAYKLGVNDYMTKPVDNEELLNKVNQLISK-NRKNILIVDDDKSLVKSVRYHLERRGYLVSAAYDGMQALEMIEKKHPDLILLDIMMPVIDGFEVIKTLKADPDTASIRIVLMTGIEIDGGRVKALSIGATDLINKGDNFNKLYETV 785          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A523WMG3_9CHLR (Histidine kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A523WMG3_9CHLR)

HSP 1 Score: 271 bits (694), Expect = 1.130e-78
Identity = 157/404 (38.86%), Postives = 250/404 (61.88%), Query Frame = 1
Query:    4 KKGVEYVMHMSPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSA--------EVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSPEAAEEPHQPPQ---ERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPES-RTDALGRGAREVLGKPFSEGKLAELV 1179
            +K +   ++  P    I+ D DK++QVVTNL+ NA+KFTP  G + +  + ++++          V V D+G+GIAPE +Q +FEKF QV  + T + +G+GLGLPI + IVE ++G L V+S+LG+G++F   +P VA    EA V       PE  EE  +      E+++LVVDDE ++RRFL H     GY V+EA+SGKEA+       P+LI LD+ + D+ G ++   LK  ++TRDIP++ILS++++KE+G+ LGA++++ KP  +++L+D+I+ L+   +Q  ++VV+DD ++ +AI+  LE +GF V+     E+AL  + K  P LI+LD+M+P + G + +  L+ +    N P+IVLT    +  R  AL  GA E + K    GKL E +
Sbjct:  664 QKNLRVSINSEPDIPAIWGDRDKLVQVVTNLLSNAMKFTPEEGEIRVGAQVLKENEAEDVSPMIRVSVSDTGIGIAPEDYQAVFEKFKQVGDTLTDKPQGTGLGLPICKEIVEHYRGKLWVESELGKGSTFYFTLPVVARP--EAAV-------PEVREEKMKVTLISGEKTILVVDDEAHVRRFLSHEFANRGYRVIEASSGKEAIDLTREHHPDLITLDVLMPDIDGLDVTAVLKSDTNTRDIPILILSVVEEKERGYSLGANEYVTKPFSKKRLMDKITHLLGQ-AQKTVVVVDDDRTLVKAIKFKLEKRGFAVYAAYDGEKALKVIAKNRPDLIVLDVMMPKMDGYEVIKILKDNPDTVNTPIIVLTGVEIDGGRVRALSLGATEYVTKSGGLGKLFESI 1057          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A1F8P3B5_9CHLR (Histidine kinase n=1 Tax=Chloroflexi bacterium RBG_16_50_11 TaxID=1797642 RepID=A0A1F8P3B5_9CHLR)

HSP 1 Score: 266 bits (681), Expect = 5.790e-77
Identity = 151/393 (38.42%), Postives = 247/393 (62.85%), Query Frame = 1
Query:   34 SPTPLPIFA-DSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVR--------DSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSPEAAEEPHQPPQE-RSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPES-RTDALGRGAREVLGKPFSEGKLAELV 1179
            +P  LP+ + D D+++QVVTNL+ N++KFTP  G + +  + V         D+  V + D+G+GIAPE+H  +FEKF QV  + T + KG+GLGLPI + IVE + G + V+S+LG+G+ F   +P V  +  +AP+       PE  E+P +  Q+ + +LVVDDE NIR FL H L ++GY V+ AA+GKEALQ A    P+LI LD+++ D+ GF++   LK   +T+DIP++ILS+I+DK++ ++LGA+D + KP D E+L+ RI+RL+   ++  +LVV+DD+S+ ++++  LE +G+  +     ++AL  +    P  I+LD+++P + G + +  L+ +    NI ++++T    +  R  AL  GA E + K     KL E +
Sbjct:  643 APKNLPVVSCDRDRLVQVVTNLLSNSIKFTPAEGKITVGVKAVAANGSNGGSDTMVVSIADTGIGIAPENHALVFEKFKQVGDTLTDKPKGTGLGLPICKEIVEHYGGKIWVESELGKGSVFSFSLPIVPPAEVKAPL-------PEVKEKPVEVVQKGKLILVVDDEENIRHFLNHELTKKGYSVIVAANGKEALQMARERCPDLITLDIQMPDINGFDVTTLLKNDEETKDIPILILSVIEDKDKAYKLGANDCMTKPFDNEELVARINRLLIG-TKKTVLVVDDDKSLVKSVKYHLEHRGYSTYVAYDGKQALEMVESHRPDCIVLDIIMPNMDGYEVIKTLKANPETANIRIVLVTGIEIDGGRVKALSVGATEYVPKSGDFNKLYEAI 1027          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A7V3SBS2_9CHLR (Response regulator n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7V3SBS2_9CHLR)

HSP 1 Score: 263 bits (672), Expect = 3.130e-76
Identity = 158/404 (39.11%), Postives = 243/404 (60.15%), Query Frame = 1
Query:   37 PTPLP-IFADSDKMIQVVTNLVGNALKFTPTGGVV----EITTRQVR----DSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGE----PSPEAAEEPH---------QPPQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPE-SRTDALGRGAREVLGKPFSEGKLAELV 1179
            PT +P ++ D D++IQV+TNL+GNA+KFTP GG +    EI + + +    D  +V V D+G+GI PE H +IFEKF QV  +   + KG+GLGLPI + IVE   G + V+S+ G+GA+F   +P    +A EA    P E    P+P A + PH         +  + R +LVVDDE NIRRFL H L Q+GY V+EAA+G +A++ A    P+LI LD+ + D+TG ++   LK+   T+DIP+VI+S+++ +E+ F LGA+D++ KP +   ++ +I RL+   SQ  +L+V+DD ++ ++I   LE +G+        +E L A  ++ P LI+LD+++P + G DFL   +      NIP I LT    + ++  AL  GA   + K    G+L E +
Sbjct:  518 PTNIPAVWGDRDRIIQVMTNLIGNAVKFTPPGGKIWVEAEILSEEGKGDHADMVKVSVTDTGVGIPPEEHHKIFEKFYQVGNTLEGKPKGTGLGLPICKEIVEHFGGKIWVESEPGKGATFSFTLPIARGAAGEASPPAPAEQTATPAPAAGKGPHGREKTTGKSKNGRPRKILVVDDEANIRRFLNHELTQKGYVVIEAANGHDAIRMAREHLPDLITLDVLMPDITGLDVTAVLKKDPLTKDIPIVIISVMEWQERAFELGAADYITKPCNMANMLHKIERLLEG-SQGRVLIVDDDRALAKSISYELEQRGYITFISHDGKEGLAAAKRIRPELIVLDMVMPVMDGYDFLEAKKGDPEIANIPTIALTGLEVDGAKVKALSLGATGYVVKSGGLGELFETI 920          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A1V5WCY7_9CHLR (Alkaline phosphatase synthesis sensor protein PhoR n=1 Tax=Chloroflexi bacterium ADurb.Bin222 TaxID=1852858 RepID=A0A1V5WCY7_9CHLR)

HSP 1 Score: 266 bits (679), Expect = 8.850e-76
Identity = 159/399 (39.85%), Postives = 237/399 (59.40%), Query Frame = 1
Query:    1 DKKGVEYVMHMSPTPLPI-FADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIP--GEPSPEAAEEPHQPPQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTA---AGPESRTDALGRGAREVLGKPFSEGKLAELV 1179
            ++KG++ +  + P  LP+ + D D+M+Q++TNLVGNA K+TP GG + I      +   + V D+G+GI+PE   RIF +F +VD     E  G+GLGL I  S+V+ H G ++V+S+ G G+ F V  P  A+    APV  P  G  +  AA          +VLVV+D+  +   LR  LE EG+ V+ AASG+ AL+ A +E+P+LI LD+RL D+ GFE+L+ LK+  DT  IPVVI+S++ D+++G RLGA D+  KPVD  +L+  ++R+++      +LVV+DD      ++  L  QG +V  V   E AL    +  P+LILLDL LPG+ G + L +L+ H    NIPV+V+T     G  S +     GA   + KPFS  +L E +
Sbjct: 1061 EEKGLQ-IRTVLPEGLPLAYGDPDRMVQILTNLVGNAFKYTPLGGEIAIYAYVREEMFHIAVADTGIGISPEDQSRIFSRFYRVDNPLVSEAGGTGLGLAITASLVQMHGGQISVESEPGEGSIFTVTFPL-AEGEATAPVGRPPAGLGANAAA----------TVLVVEDDPEVAEMLRLTLEHEGHRVVVAASGEAALRLARQEQPDLISLDIRLPDLDGFEVLQLLKRNPDTASIPVVIVSVVFDQDRGLRLGAVDYFTKPVDEARLLQVVNRVLAGKGT--VLVVDDDRDTLTLLRTALRAQGLQVRTVTRGERALRMAQEQPPSLILLDLKLPGMDGYEVLQQLKRHPATANIPVVVMTGFAEPGNGSASAMKALGATRFVTKPFSMEELGEEI 1445          
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Match: A0A7V5DMQ8_9CHLR (GAF domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V5DMQ8_9CHLR)

HSP 1 Score: 265 bits (676), Expect = 2.740e-75
Identity = 150/389 (38.56%), Postives = 231/389 (59.38%), Query Frame = 1
Query:   34 SPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSAEVVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAHKGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSP---EAAEEPHQPPQERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLILLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFLNKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVHPVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVIVLTAAGPES---RTDALGRGAREVLGKPFSEGKLAELVR 1182
            SP P P++AD D++ Q++TNLV NA ++TP GG + I+ R+V D  ++ V D+G+GI+PE  +++F++F + D    +E  G+GLGL I +S VE H G++ + S+L +G++F   +P          VA+  +P P   EA  E       + +LVV+DE +I   +   L +EGY+V     G E +    REKP+LI LD+RL    GFE+L +LK   +T DIPVVILSI+ D ++ +RLGA D+L KPVD ++L++ +  ++ +     +L+ +D+E  ++ ++ +LE  GF    V+   + L    K  P LILLDL +PG+ G   L +L+ +    +IPVIV+TA+  E    R  AL  GA   + KPFS   L E VR
Sbjct: 2136 SPLP-PVYADRDRLTQILTNLVDNACRYTPAGGKITISARRVSDKVQIDVADTGIGISPEDQKKVFDRFYRADHPVVQETGGTGLGLAIVKSFVEMHGGSIWLKSELDKGSTFSFTMP----------VAVFDQPLPPAEEATAEAEPIGAGKRILVVEDEPDIANLVATHLREEGYEVSTCGRGDEVMDLVLREKPHLITLDIRLPGKDGFEVLSDLKSNPETADIPVVILSIVPDPDRAYRLGAVDYLGKPVDEKRLVNTVHSILFAHDL--VLICDDNEDTQKLLREVLERNGFVARAVSDGRQVLAVAEKERPGLILLDLKMPGLDGYSVLEQLKRNPNTADIPVIVMTASISEDKMKRERALALGAANFMTKPFSIPDLVEEVR 2511          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20278.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XKU4_9BURK1.120e-9644.25Histidine kinase n=1 Tax=Burkholderiales bacterium... [more]
A0A3M1LC25_9CHLR1.420e-8240.84Response regulator (Fragment) n=1 Tax=Chloroflexi ... [more]
A0A7V3HI67_9CHLR1.440e-8141.69GAF domain-containing protein n=1 Tax=Anaerolineae... [more]
A0A497B635_9CHLR2.270e-8039.30Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A7V2RG79_9CHLR7.560e-7939.00Histidine kinase n=1 Tax=Dehalococcoidia bacterium... [more]
A0A523WMG3_9CHLR1.130e-7838.86Histidine kinase n=1 Tax=Dehalococcoidia bacterium... [more]
A0A1F8P3B5_9CHLR5.790e-7738.42Histidine kinase n=1 Tax=Chloroflexi bacterium RBG... [more]
A0A7V3SBS2_9CHLR3.130e-7639.11Response regulator n=1 Tax=Dehalococcoidia bacteri... [more]
A0A1V5WCY7_9CHLR8.850e-7639.85Alkaline phosphatase synthesis sensor protein PhoR... [more]
A0A7V5DMQ8_9CHLR2.740e-7538.56GAF domain-containing protein n=1 Tax=Anaerolineae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20278contigP-wetherbeei_contig20278:49..1233 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1269813.ATUL01000004_gene2196
PFAMsCHASE3,GAF_2,GGDEF,HATPase_c,HisKA,Response_reg
Model size1185
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.89e-65
EggNOG OGsCOG2199@1|root,COG5002@1|root,COG3706@2|Bacteria,COG5002@2|Bacteria,1R7HC@1224|Proteobacteria,1T2D4@1236|Gammaproteobacteria
Descriptionresponse regulator
Cds size1161
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186195.4019527-CDS-P-wetherbeei_contig20278:48..12091683186195.4019527-CDS-P-wetherbeei_contig20278:48..1209Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20278 49..1209 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186195.41455-UTR-P-wetherbeei_contig20278:1209..12331683186195.41455-UTR-P-wetherbeei_contig20278:1209..1233Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20278 1210..1233 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20278.1.1prot_P-wetherbeei_contig20278.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20278 49..1209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20278.1.1

>prot_P-wetherbeei_contig20278.1.1 ID=prot_P-wetherbeei_contig20278.1.1|Name=mRNA_P-wetherbeei_contig20278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=387bp
MHMSPTPLPIFADSDKMIQVVTNLVGNALKFTPTGGVVEITTRQVRDSAE
VVVKDSGMGIAPEHHQRIFEKFGQVDTSETREIKGSGLGLPIARSIVEAH
KGTLTVDSDLGRGASFVVRVPFVADSAKEAPVAIPGEPSPEAAEEPHQPP
QERSVLVVDDEVNIRRFLRHILEQEGYDVLEAASGKEALQRASREKPNLI
LLDLRLGDMTGFEILEELKQKSDTRDIPVVILSIIQDKEQGFRLGASDFL
NKPVDREKLIDRISRLISSPSQMDILVVEDDESVRRAIQVMLETQGFKVH
PVASAEEALVALNKLAPALILLDLMLPGISGNDFLTELRHHETWCNIPVI
VLTAAGPESRTDALGRGAREVLGKPFSEGKLAELVRM
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mRNA from alignment at P-wetherbeei_contig20278:49..1233-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20278.1.1 ID=mRNA_P-wetherbeei_contig20278.1.1|Name=mRNA_P-wetherbeei_contig20278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig20278:49..1233- (Phaeothamnion wetherbeei SAG_119_79)
GACAAAAAAGGCGTGGAATACGTAATGCACATGTCCCCCACGCCGCTGCC GATTTTTGCCGATTCCGACAAGATGATACAGGTCGTGACCAATCTGGTGG GCAACGCCCTCAAGTTCACACCGACCGGAGGGGTGGTCGAGATTACCACC CGCCAGGTGCGCGACAGCGCGGAAGTCGTGGTTAAAGACTCGGGGATGGG TATCGCTCCCGAACACCATCAGCGGATCTTTGAGAAGTTTGGTCAGGTTG ACACCTCAGAGACGCGGGAGATCAAAGGATCGGGTCTGGGTCTGCCCATC GCCCGCAGCATCGTGGAGGCCCACAAGGGGACCCTCACGGTCGATAGCGA CCTGGGGCGCGGCGCTAGCTTCGTGGTGCGCGTTCCCTTCGTGGCAGACT CGGCCAAAGAAGCGCCCGTTGCCATTCCGGGAGAGCCCTCGCCGGAAGCC GCCGAAGAGCCCCATCAGCCCCCTCAGGAGCGCAGCGTGCTCGTTGTCGA TGACGAGGTGAATATCCGCCGCTTCCTGCGCCACATCCTCGAGCAGGAGG GCTACGACGTGCTCGAGGCGGCCTCCGGGAAGGAAGCCCTGCAGCGCGCC TCGCGGGAGAAGCCCAACTTGATATTGCTCGATTTGCGACTTGGTGACAT GACGGGCTTTGAGATTCTCGAAGAACTCAAGCAAAAGAGCGATACACGCG ACATCCCTGTGGTGATCTTATCGATCATTCAGGACAAAGAGCAGGGCTTT CGGCTGGGCGCCAGCGACTTTCTCAATAAACCCGTGGATCGCGAGAAGCT TATCGATCGCATCAGCCGCTTGATTAGCTCGCCGTCTCAGATGGACATCC TGGTCGTAGAGGACGACGAATCGGTGCGTCGAGCCATTCAGGTGATGCTG GAGACGCAGGGCTTCAAGGTTCATCCGGTAGCTTCCGCCGAGGAAGCTCT GGTGGCCCTCAATAAGCTTGCGCCGGCCCTCATTCTGCTGGACTTGATGC TCCCGGGGATCAGCGGCAATGATTTTCTGACCGAACTTCGTCACCACGAG ACCTGGTGCAATATTCCCGTCATTGTGCTCACGGCGGCTGGTCCCGAGAG CCGCACCGACGCTCTGGGTCGGGGAGCTCGCGAGGTTCTCGGCAAGCCCT TCTCAGAAGGGAAGCTGGCCGAGCTCGTGCGCATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20278:49..1233-

>mRNA_P-wetherbeei_contig20278.1.1 ID=mRNA_P-wetherbeei_contig20278.1.1|Name=mRNA_P-wetherbeei_contig20278.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1161bp|location=Sequence derived from alignment at P-wetherbeei_contig20278:49..1233- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACATGTCCCCCACGCCGCTGCCGATTTTTGCCGATTCCGACAAGAT
GATACAGGTCGTGACCAATCTGGTGGGCAACGCCCTCAAGTTCACACCGA
CCGGAGGGGTGGTCGAGATTACCACCCGCCAGGTGCGCGACAGCGCGGAA
GTCGTGGTTAAAGACTCGGGGATGGGTATCGCTCCCGAACACCATCAGCG
GATCTTTGAGAAGTTTGGTCAGGTTGACACCTCAGAGACGCGGGAGATCA
AAGGATCGGGTCTGGGTCTGCCCATCGCCCGCAGCATCGTGGAGGCCCAC
AAGGGGACCCTCACGGTCGATAGCGACCTGGGGCGCGGCGCTAGCTTCGT
GGTGCGCGTTCCCTTCGTGGCAGACTCGGCCAAAGAAGCGCCCGTTGCCA
TTCCGGGAGAGCCCTCGCCGGAAGCCGCCGAAGAGCCCCATCAGCCCCCT
CAGGAGCGCAGCGTGCTCGTTGTCGATGACGAGGTGAATATCCGCCGCTT
CCTGCGCCACATCCTCGAGCAGGAGGGCTACGACGTGCTCGAGGCGGCCT
CCGGGAAGGAAGCCCTGCAGCGCGCCTCGCGGGAGAAGCCCAACTTGATA
TTGCTCGATTTGCGACTTGGTGACATGACGGGCTTTGAGATTCTCGAAGA
ACTCAAGCAAAAGAGCGATACACGCGACATCCCTGTGGTGATCTTATCGA
TCATTCAGGACAAAGAGCAGGGCTTTCGGCTGGGCGCCAGCGACTTTCTC
AATAAACCCGTGGATCGCGAGAAGCTTATCGATCGCATCAGCCGCTTGAT
TAGCTCGCCGTCTCAGATGGACATCCTGGTCGTAGAGGACGACGAATCGG
TGCGTCGAGCCATTCAGGTGATGCTGGAGACGCAGGGCTTCAAGGTTCAT
CCGGTAGCTTCCGCCGAGGAAGCTCTGGTGGCCCTCAATAAGCTTGCGCC
GGCCCTCATTCTGCTGGACTTGATGCTCCCGGGGATCAGCGGCAATGATT
TTCTGACCGAACTTCGTCACCACGAGACCTGGTGCAATATTCCCGTCATT
GTGCTCACGGCGGCTGGTCCCGAGAGCCGCACCGACGCTCTGGGTCGGGG
AGCTCGCGAGGTTCTCGGCAAGCCCTTCTCAGAAGGGAAGCTGGCCGAGC
TCGTGCGCATG
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