mRNA_P-wetherbeei_contig20270.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: UPI0015E3BA3F (hypothetical protein n=1 Tax=Pseudorivibacter rhizosphaerae TaxID=2570323 RepID=UPI0015E3BA3F) HSP 1 Score: 248 bits (632), Expect = 1.230e-73 Identity = 149/278 (53.60%), Postives = 184/278 (66.19%), Query Frame = 1
Query: 19 PLNPILAAALLGGGALLSGCNKDDDDPVVTPQSRV-VQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKISVVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSIPA 849
P L+AA L ALL GC DD P P + + + G AAVGAALS+ V ITD+ G VC E +IVTS TG +SCTL G+ APF++VVTDPSGA P+VSV T TPSPGTP T NV+P+T AIV +LAPD ALS VA P+L++ A L + PAGYDPFSTPI AAT + +GN AD+++DLL+IS VNGVTT++TID P AV LA AT P LP+P TA +TLADA+K +A+ N CFALP A R L+ + +I A
Sbjct: 9 PAGAGLSAATLAAWALL-GCGGSDDPPAPPPAAPITLAGVAAVGAALSKADVRITDASGAPVCQETSIVTSDTGAYSCTLQGGRTAPFIVVVTDPSGARPPMVSVGTSTPSPGTPLTVNVTPITTAIVAQLAPDRSALSAVANPSLLDTAALGSXXXXXXXXXXXXXXXXXXPAGYDPFSTPITAATATVSGNTADRIVDLLQISTVNGVTTVATIDRPADAVPLAGATTTTPTTLPAPGTAVITLADAIKAAAAAFNACFALPPAQRALASNTAIAA 285
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: UPI001186BAB3 (hypothetical protein n=1 Tax=Ideonella sp. A 288 TaxID=1962181 RepID=UPI001186BAB3) HSP 1 Score: 234 bits (597), Expect = 1.020e-67 Identity = 134/243 (55.14%), Postives = 171/243 (70.37%), Query Frame = 1
Query: 121 VVQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKISVVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSIPA 849
VV GTAAVGAAL+ +VS+TD G VCAEP +VT+ TG F+CT+ G+ APF++VVT+P GA+ P+VS+ TP+PGT N +PLT AIV +LA VVA P L++ A L TTA VL QL VL LG PAGYDPFSTPI AATP+ AGN ADQ+I++L+ + VNGV+ +ST+DNP V +A A P VLP+P AV LADA++ ++ S+N CFALP A RVL+ D +IPA
Sbjct: 166 VVAGTAAVGAALANANVSVTDVSGAAVCAEPRVVTNGTGGFTCTVQAGRVAPFVVVVTEPFGAFPPMVSIVASTPAPGTALITNATPLTTAIVAQLAXXXXXXXVVANPALVDLAALARTTANVLAQLGPVLTALGVPAGYDPFSTPIQAATPTQAGNTADQVIEMLRFTTVNGVSMVSTVDNPAGGVPVAGPNTANPPVLPAPVPDAVALADAMRQITQSMNDCFALPVAQRVLAVDLTIPA 408
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: UPI0015674DFB (PEP-CTERM sorting domain-containing protein n=1 Tax=Aquabacterium terrae TaxID=2732868 RepID=UPI0015674DFB) HSP 1 Score: 207 bits (528), Expect = 2.100e-57 Identity = 126/245 (51.43%), Postives = 168/245 (68.57%), Query Frame = 1
Query: 112 QSRVVQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKISVVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSIP 846
Q +++GTAAVGAAL+ +V++TD+ C E IVT+ G F+CT+ GK AP LIVV +P GAY P+VS+A P G+ AN +PLT AIVG+LAP G+AL+VVA P+L++ L A V+ QL +VLA LGAPAGYDPF++PIVAATP+ +GN AD +I++L+ S VNGV I TIDNP V LA AA +LP+PS AV L +++++ +L CFAL A RVL+ D +IP
Sbjct: 338 QGPLLRGTAAVGAALANANVTVTDAANTPACHESPIVTNGIGSFTCTVKPGKLAPLLIVVAEPFGAYPPMVSIADTVPPAGSALVANATPLTTAIVGQLAPSGNALAVVANPSLIDLQKLATIKANVMAQLHDVLAALGAPAGYDPFTSPIVAATPAQSGNTADLIIEMLRFSNVNGVARIGTIDNPGG-VPLAGV--AAGPMLPAPSGGAVALGSTMQMMANALRNCFALTVAQRVLATDTTIP 579
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: UPI000A743555 (hypothetical protein n=1 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI000A743555) HSP 1 Score: 203 bits (517), Expect = 7.700e-57 Identity = 123/245 (50.20%), Postives = 164/245 (66.94%), Query Frame = 1
Query: 109 PQSRVVQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKISVVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSI 843
P + V++GT AVGAAL+ ++I+D G C+ T+A G++SC+L AP L+V TDP+G + P+V+V P+PG+ A NV+PLT AIVG+LAPD ALSVVATP+L++ A L+ VLA L PAG++PFSTP+VAAT S AGN ADQLID+L+I+ VNGV IST+D DA VA+A AP L +P AA+ LA ALKL S + RCFALP A RVL+ ++++
Sbjct: 55 PAAAVLRGTVAVGAALAGAQLTISDRAGAAACSGELAPTTAGGEYSCSLAPAAQAPLLVVATDPAGGHAPMVAVLPTLPAPGSEAVTNVTPLTTAIVGQLAPDRSALSVVATPSLVDTARLEXXXXXXXXXXXXVLASLQLPAGFNPFSTPLVAATASTAGNAADQLIDVLRITQVNGVPMISTVDRSDAPVAMADGVQPAP-TLAAPPAAALDLASALKLSSQAFTRCFALPLAQRVLATEENV 298
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: UPI00202361D7 (hypothetical protein n=1 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI00202361D7) HSP 1 Score: 192 bits (488), Expect = 1.050e-52 Identity = 124/266 (46.62%), Postives = 163/266 (61.28%), Query Frame = 1
Query: 70 SGCNK--DDDDPVVTPQSR------VVQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKISVVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSI 843
+GC +D TP++ +V+GT AVGAAL+ ++ITD G C T+A G + C+L D P L+V TDPSGA+ P V+ P A N++PLT AIVG+LAPDG AL+VVATPTL++AA VL L PAGYDPF+TP+VAAT + AGN AD L+D+++I+ VNGVTT+ST+D PDA VALA AAP L +P AA+ L +L+ S +L +CFALP A RVLS D ++
Sbjct: 36 AGCGSGGSSNDEAATPEAPAAPTPPMVRGTVAVGAALAGAELTITDRTGSAACTGTLAPTTAAGTYECSLKDAVQGPLLLVATDPSGAHGPQVAALAVPPLTNGAAVVNLTPLTTAIVGRLAPDGSALTVVATPTLLDAARXXXXXXXXXXXXXXVLTALQMPAGYDPFATPLVAATSTQAGNAADLLLDVVRITAVNGVTTLSTVDRPDAPVALADGVTAAP-TLAAPVLAALDLTASLQRASNALTQCFALPLAQRVLSTDTTV 300
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: UPI00190CDBB4 (Ig-like domain-containing protein n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190CDBB4) HSP 1 Score: 140 bits (353), Expect = 4.770e-34 Identity = 105/283 (37.10%), Postives = 151/283 (53.36%), Query Frame = 1
Query: 31 ILAAALLGGGALLSGCNKDDDDPVVTPQSR---VVQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKIS-------VVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSIPA 849
I AAL+ A+L+GC T + V+ GT A GAAL+ V+ITD G + C E I ++A G FSCTL +G+ APF ++ TDP+G P+ SV +TP G T NV+PLT AIV + DG V+ T+ A L + T KV+ QL +L+ L P GY+PF++ I+ + AGN AD ++DLL+I+ + V T ST+ ++ S D+ + V L+ AL + +N CF LP ++RVL D S+PA
Sbjct: 6 IATAALIA--AVLAGCGXXXXXXTPTTAVKAPAVLVGTVATGAALAGAIVTITDHNGASACVETNITSAADGSFSCTLKEGEQAPFYVIATDPTGKNSPMTSVVIKTPESGLTGTVNVTPLTTAIVLSVTGDGSPQDFVSKGTIDPTA-LASMTDKVVAQLGPMLSTLQMPTGYNPFTSQIMPSMNGVAGNGADTILDLLRITHDAQGQIAIGSVGTTSTVPLGSTSIVSQSIADSF--------SVMVDLSKALPIEGQLMNACFTLPVSSRVLGTDTSVPA 277
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: UPI001911FBB2 (hypothetical protein n=1 Tax=Ramlibacter ginsenosidimutans TaxID=502333 RepID=UPI001911FBB2) HSP 1 Score: 134 bits (336), Expect = 1.010e-31 Identity = 106/265 (40.00%), Postives = 145/265 (54.72%), Query Frame = 1
Query: 43 ALLGGGALL-SGCNKDDDDPVVTPQSRV-VQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKI--SVVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVL 825
AL+ G LL +GC + + GTAAVG+AL V+IT++ G + C E +I T+ G ++CTL G+ APF +VVT G T N +PLT AIV +L GDALSVV T+ +A+ L A TA V+ QL++VLA +GAPA YDPFST I AA AD ++D++K+ G +ST+DNP V LA+AT A G + +P A TL+ ++ + + CFALP A RVL
Sbjct: 10 ALVAGSVLLIAGCGGXXXXXXXXXXAAAQLVGTAAVGSALGNAPVTITNAAGNSPCQESSITTTPLGSYTCTLKSGETAPFFVVVTXXXXXXXXXXXXXXXXXXAGATLTVNATPLTTAIVAQLG-GGDALSVVKGRTV-DASQLAAITANVVQQLSQVLAAIGAPANYDPFSTSITAAXXXXXXXXADMVLDVVKVVSDPATGQLALSTVDNPTP-VLLATATSAG-GTVSAPDPAVSTLSQGTQIAARAFTDCFALPTAQRVL 270
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: A0A0F0FHJ8_9BURK (Uncharacterized protein n=1 Tax=Burkholderiaceae bacterium 16 TaxID=1619952 RepID=A0A0F0FHJ8_9BURK) HSP 1 Score: 122 bits (305), Expect = 8.700e-29 Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = 1
Query: 271 APFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKISV--VNGVTTISTIDNPDAAVALASATD-----AAPGVLPSPSTAAVTLADALKLLSASLNRCFALPA 810
APF +VVTDP+G PLVSV+T TP+ G T N +PLT AIV +LA DG+ L+ V+ T+ +AA L TA V+ QLA VLA +GAPA YDPFST I AAT + GN ADQ++D++K+ G ++T+DNP +A+A+AT AA L A + ++ L+ CFALPA
Sbjct: 2 APFFVVVTDPTGNTAPLVSVSTVTPAAGAKLTLNATPLTTAIVVQLAADGNPLTFVSGKTV-DAAALQKVTANVVAQLASVLAAIGAPASYDPFSTAITAATATGVGNTADQVLDIVKVVTDPATGKLALTTVDNPTP-IAIATATSTGGTLAAXXXXXXXXXXXXALPQAAQAVAKGLSACFALPA 186
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: A0A1D9H753_9BURK (Uncharacterized protein n=3 Tax=Cupriavidus TaxID=106589 RepID=A0A1D9H753_9BURK) HSP 1 Score: 121 bits (304), Expect = 2.100e-27 Identity = 93/244 (38.11%), Postives = 129/244 (52.87%), Query Frame = 1
Query: 124 VQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKI--SVVNGVTTISTIDNPDAAVALASATDAAPGVLPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSIPA 849
+ GTAA G+AL+ +V++TDS G + C E +I TSA G ++CTL G+AAPF IV AA L T A V+ QL+ VLA +GAPAGYDPF+T I AAT S AGN ADQL+D++K+ G ++T+DNP + LA+AT A G L +P+ +L A++ ++ +L+ CFALPA+ RVL+ D +IPA
Sbjct: 44 LSGTAATGSALANANVAVTDSSGNSPCQESSITTSAFGTYTCTLKAGEAAPFFIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXAAALKQTIANVVAQLSSVLAAIGAPAGYDPFTTAITAATASGAGNTADQLLDIVKVVKDPATGKAALATVDNPTP-ITLATATSAG-GTLSAPAAGVASLPQAIQAVAQALSSCFALPASQRVLATDTTIPA 284
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Match: A0A258QBQ0_9BURK (Uncharacterized protein n=1 Tax=Polaromonas sp. 35-63-240 TaxID=1970417 RepID=A0A258QBQ0_9BURK) HSP 1 Score: 103 bits (258), Expect = 2.610e-21 Identity = 86/250 (34.40%), Postives = 121/250 (48.40%), Query Frame = 1
Query: 103 VTPQSRVVQGTAAVGAALSQVSVSITDSMGGTVCAEPAIVTSATGDFSCTLLDGKAAPFLIVVTDPSGAYLPLVSVATRTPSPGTPATANVSPLTNAIVGKLAPDGDALSVVATPTLMNAATLDATTAKVLLQLAEVLARLGAPAGYDPFSTPIVAATPSAAGNPADQLIDLLKISV--VNGVTTISTIDNPDAAVALASATDAAPGV-LPSPSTAAVTLADALKLLSASLNRCFALPAAARVLSKDDSI 843
+TP + GTAA GAAL+ V+IT+S G + C E +I T+A G ++CTL G+ APF IVV V+ QLA VL +GAPAGYDPF+T I AAT SA GN AD ++D++K+ G ++T+DNP V LA+AT PG + +P+ TL+ A ++ + + CFA+P A RVL+KDD++
Sbjct: 51 ITPSAAAFSGTAATGAALANAGVAITNSSGNSPCLEASITTTALGSYTCTLKTGETAPFFIVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XVVAQLANVLTAVGAPAGYDPFTTSITAATASATGNTADMVLDVVKVVTDPATGKLALNTVDNPTPIV-LATATT--PGTTMGTPAVGVSTLSQAAQIAAQAFTACFAVPTAQRVLAKDDAV 296 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20270.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20270.1.1 >prot_P-wetherbeei_contig20270.1.1 ID=prot_P-wetherbeei_contig20270.1.1|Name=mRNA_P-wetherbeei_contig20270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp MKIARFPLNPILAAALLGGGALLSGCNKDDDDPVVTPQSRVVQGTAAVGAback to top mRNA from alignment at P-wetherbeei_contig20270:1..849- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20270.1.1 ID=mRNA_P-wetherbeei_contig20270.1.1|Name=mRNA_P-wetherbeei_contig20270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig20270:1..849- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20270:1..849- >mRNA_P-wetherbeei_contig20270.1.1 ID=mRNA_P-wetherbeei_contig20270.1.1|Name=mRNA_P-wetherbeei_contig20270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig20270:1..849- (Phaeothamnion wetherbeei SAG_119_79)back to top |