prot_P-wetherbeei_contig2027.6.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2027.6.1
Unique Nameprot_P-wetherbeei_contig2027.6.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length336
Homology
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BLAST of mRNA_P-wetherbeei_contig2027.6.1 vs. uniprot
Match: A0A7S2SRU5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRU5_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.310e-9
Identity = 75/226 (33.19%), Postives = 105/226 (46.46%), Query Frame = 0 
Query:   27 TAALRNMCKCGILSMFMLGLLPTYVGMLADCATAETFGSTPLKRLRAFGDADGAGLVTRYLAG--AAFYLVLQEVAMELRKMLRPQLRQLRRLLP--------RPRPALDMPALVAAVEAQPLLPQLLRMAALVT-IVLPVCAVLLLLVPLRVGC---LVPHWGPLRVRHEDSFEELQLPLQLLLFHVVLPTVIERCNAQAVVRRALRAWFLNVSQQLGLRAFLFR 238
            +AAL    K G++    L + P  +G L   +TA   G++  +RL  F       L   +L G  A ++ V   VA+ELR  L P +  L   LP             L   AL   + A  L   LLR  AL T + +P+   LL  V   + C   +VP   PL +R  +   E+QLPL+L+LFHV+LP  +ER   +  +  ALR W    S+  GL A L R
Sbjct:  634 SAALALATKIGLVLALELLVFPVVLGALVSASTAAPMGTSVHERLALFTQRPDLALFLHWLLGLVATWWQVF--VALELRATLHPSI--LGNFLPDLVGEEENEAAARLANEALFKRLRASSLATLLLRDIALFTGLSVPL---LLATVWFPLNCAHRMVPGASPLVLRLSEPLMEVQLPLELILFHVLLPIAVERMQVRRPLSAALRWWLETTSRMFGLDAQLLR 852
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BLAST of mRNA_P-wetherbeei_contig2027.6.1 vs. uniprot
Match: A0A7R9TSR1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TSR1_9VIRI)

HSP 1 Score: 58.9 bits (141), Expect = 7.350e-6
Identity = 62/236 (26.27%), Postives = 99/236 (41.95%), Query Frame = 0 
Query:   32 NMCKCGILSMFMLGLLPTYVGMLADCATAETFGSTPLKRLRAFGDADGAGLVTRYLAGAAFYLVLQEVAMELRKMLRPQLRQLRR--LLPRPRPALDMPALVAAVEAQPLLPQLLRMAALVTIVLPVCAVLLLLVPLRVG-CLVPHWGPLRVRHEDSFEELQLPLQLLLFHVVLPTVIERCNAQAVVRRALRAWFLNVSQQLGLRAFLFRPDLP------------GGVENPAIRA 252
             + K  +L +  LGL P   G   D  T    G+T  +R   +  +        +L G AF L +      LR++LRP +    R    P   P  D+         +  + + LR   +   +     VLL+ +P+++   L P   P+++R  D F E+  P+ +LLFH+V+P   E    +  +RR    W    +   G+ A L  PD+P            GGV+ P  RA
Sbjct:  325 TLLKVTVLLVMELGLFPLMCGWWVDFCTLPLLGATLAERFEFWSSSPVTSTNVHWLVGIAFMLNMSIFVALLREVLRPGVLSFLRDPADPNYNPFRDL--------VEDSVSKHLRRVVVSKAIYGTLTVLLVYIPIQLALALAPSLFPVQLRFTDPFAEV--PVDMLLFHLVVPFTAEHVRPRRALRRLFSEWVTWAATAFGVDAQLL-PDVPVHVGGDPNGEDGGGVDVPLERA 549
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2027.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2SRU5_9STRA3.310e-933.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9TSR1_9VIRI7.350e-626.27Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13145SSM4 PROTEINcoord: 27..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2027contigP-wetherbeei_contig2027:4377..6254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2027.6.1mRNA_P-wetherbeei_contig2027.6.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2027 4376..6254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2027.6.1 ID=prot_P-wetherbeei_contig2027.6.1|Name=mRNA_P-wetherbeei_contig2027.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
GAAGAAGAAAAAGAVAVPMRERVRELTAALRNMCKCGILSMFMLGLLPTY
VGMLADCATAETFGSTPLKRLRAFGDADGAGLVTRYLAGAAFYLVLQEVA
MELRKMLRPQLRQLRRLLPRPRPALDMPALVAAVEAQPLLPQLLRMAALV
TIVLPVCAVLLLLVPLRVGCLVPHWGPLRVRHEDSFEELQLPLQLLLFHV
VLPTVIERCNAQAVVRRALRAWFLNVSQQLGLRAFLFRPDLPGGVENPAI
RAVVAAGVVRLVQEGVGAIHGVNAAIREAQDAALAAAALRNPAALAGANP
LPPQQQQQPPPAAFLIRVGAGGGQPAAVAAAAADPA
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