mRNA_P-wetherbeei_contig2027.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: D7G9B1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B1_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 8.220e-18 Identity = 57/150 (38.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 601 PAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSWRRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKGLLPLTFTDPVRLAQLQRLTFPAFVGLKAAAAAGAAGLQFLQSCHDSIRDEMYLLGTQLRN 1050
P ET L ++WALGLV +K+W RCV G +W+ RL R+R NG GV+F TM +V P L+ VG+FYF P + + LPL + L +Q+ F+ LKA +A + +++ HD IRD+ YL+G +L N
Sbjct: 1489 PTEETAALTWGKIWALGLVCVKLWARCVLAGAVRDE-------AWQGRLRRLRENGFRGVDFKFTMLEVCFPLLDVVGQFYFWPHLLNRFALPLLVANQRDLRVIQKGMPFVFLLLKALWSAAMFVVNKMKALHDLIRDDEYLVGLELEN 1631
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: A0A6H5L475_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L475_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.100e-17 Identity = 55/150 (36.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query: 601 PAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSWRRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKGLLPLTFTDPVRLAQLQRLTFPAFVGLKAAAAAGAAGLQFLQSCHDSIRDEMYLLGTQLRN 1050
P ET L ++WALGLV +K+W RCV G +W+ RL R+R NG GV+F T+ +V P L+ VG+FYF P + + LPL + L +Q+ F+ L+A +A + +++ HD IRD+ YL+G +L N
Sbjct: 121 PTEETAALTWGKIWALGLVCVKLWARCVLAGAVRHE-------AWQGRLRRLRDNGFRGVDFKFTILEVCFPLLDVVGQFYFWPHLLNRFALPLLVANQRDLRVIQKGMPFVFLLLRALWSAAMFVVNKMKALHDLIRDDEYLVGLELEN 263
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: W7TZ38_9STRA (Ring u-box domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZ38_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.740e-14 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 553 MIGSVAQAVTVIPLRVPAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSWRRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKG 870
++G + + ++P RVP ETPL+ + W LGLV LK+ +RC+ +G G W+R+ +RV NG W ++FT T+R VVLP L P F+K
Sbjct: 41 LVGLLFELAVILPARVPVDETPLIPLYEAWVLGLVFLKISVRCLLLGLLGNDH------PWKRKFERVGANGFWNLDFTWTLRHVVLPVLCLFLSLLLPPYFFSKS 140
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: A0A4D9D9P7_9STRA (RING-CH-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9P7_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 8.710e-14 Identity = 59/211 (27.96%), Postives = 94/211 (44.55%), Query Frame = 1
Query: 553 MIGSVAQAVTVIPLRVPAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSWRRRLDRVRRNGVWGVNFTETMRDVVLPAL-----------------NSVGEFY----------------FMPLMFAKGLLPLTFTDPVR-----------LAQLQRLTFPAFVGLKAAAAAGAAGLQF-LQSCHDSIRDEMYLLGTQLRN 1050
++G + + ++P RVP ETPL+ + W LGLV LK+ +RC+ +G G W+R+ +RV NG W ++F T+R VVLP + +G Y F+P + L P +A L+R+ + A++ L + GA GL + HD +RD++YL+G +LRN
Sbjct: 735 LVGLLFELAVILPARVPMDETPLIPLYEAWVLGLVFLKISVRCLLLGLLGNDH------PWKRKFERVGANGFWNLDFAWTLRHVVLPVICLFLSLLLPPYFFSKSVERLGYLYLRHVVLPAPLHPALPRFLPRFLLRVLAPAWHAQEQERDAYVSLVLYMIAGLKRMVYVAYL-LWRLSVYGARGLHSGFRHLHDKLRDDVYLVGVELRN 938
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: A0A388KVE1_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KVE1_CHABU) HSP 1 Score: 77.4 bits (189), Expect = 1.040e-11 Identity = 55/183 (30.05%), Postives = 83/183 (45.36%), Query Frame = 1
Query: 553 MIGSVAQAVTVIPLRVPAGETPLLAPAQVWALGLVLLKVWMRCVTIG-----GFGGXXXXXXGLSWRRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKGLLPLTFTDPVRLAQLQRLTFPAFVGLKAAAAAGAAGL-----QFLQSCHDSIRDEMYLLGTQLRNADAITEG 1071
+IG + + V+PL P E L Q WA+GL+LL++WMR V +G G G WR + +R+R +G ++ +++V+ P + + +P AKGL+ L P L P F L A L +L HDSIRD+ YL+G +L N + G
Sbjct: 1131 LIGLLFDLLVVVPLHTPLDERLKLLYYQDWAVGLLLLEIWMRLVMLGQVMPFGIGDD-------RWRNKFERIRNDGFMRLHGMWVLKEVIAPIVGYLLTLLCLPYACAKGLMALISPSPQ-----MALLVPRFACLGTVVAVVLWRLLQKSRAWLIELHDSIRDDRYLIGQRLHNYTRVVGG 1301
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: A0A8J2QEB6_9NEOP ((African queen) hypothetical protein n=1 Tax=Danaus chrysippus TaxID=151541 RepID=A0A8J2QEB6_9NEOP) HSP 1 Score: 66.6 bits (161), Expect = 1.230e-8 Identity = 44/161 (27.33%), Postives = 79/161 (49.07%), Query Frame = 1
Query: 574 AVTVIPLRVPAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSWRRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKGLLPLTFTDPVRLAQLQRLTFPAFVGLKAAAAAGAAGLQFLQSCHDSIRDEMYLLGTQLRNAD 1056
A TVIPLRVP ++P+L Q WALG++ K+ + +G S RR +++ R+G+ ++ +R V P + +G +P + A + PL + + L R +PA + + AA ++ ++ I+++ YL+G +L N D
Sbjct: 165 AGTVIPLRVPLEQSPVLFVLQDWALGVLYTKIVCALIMMGS---------DWSLRRAIEKAYRDGIREMDLQFILRSVAAPLVRWLGLALVVPYVLAHSVAPLVLSAHAQRNLLVRRVYPALLLIALLAALALFQIRQFTKLYEHIKNDKYLVGQRLVNYD 316
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: A0A6V7V400_9BILA (Hypothetical protein n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7V400_9BILA) HSP 1 Score: 58.9 bits (141), Expect = 1.960e-6 Identity = 42/168 (25.00%), Postives = 76/168 (45.24%), Query Frame = 1
Query: 553 MIGSVAQAVTVIPLRVPAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSW--RRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKGLLPLTFTDPVRLAQLQRLTFPAFVGLKAAAAAGAAGLQFLQSCHDSIRDEMYLLGTQLRN 1050
M+G Q + + PLRV ++PL P + WA+G+V K+ V +G W + +++ +G+W E ++V+P N++ P + +K ++ D + R ++P F+G A + L+ IR++ YL+GTQL N
Sbjct: 41 MLGFYFQMLVISPLRVAIFQSPLFFPWKEWAMGVVHFKIICASVLMGP-----------DWWLKTAFEQIYADGIWNFQLKELYINMVIPIGNALSFLIAFPYVASKFIMLFVEADRENQVIIIRYSYPFFLGSICIVAFLIWQWKKLKMLAQKIRNDKYLIGTQLVN 197
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: A0A6V7ULD7_9BILA (Hypothetical protein n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7ULD7_9BILA) HSP 1 Score: 57.8 bits (138), Expect = 2.100e-5 Identity = 41/168 (24.40%), Postives = 76/168 (45.24%), Query Frame = 1
Query: 553 MIGSVAQAVTVIPLRVPAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSW--RRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKGLLPLTFTDPVRLAQLQRLTFPAFVGLKAAAAAGAAGLQFLQSCHDSIRDEMYLLGTQLRN 1050
M+G Q + + PLRV ++PL P + WA+G+V K+ V +G W + +++ +G+W + ++V+P N++ P + +K ++ D + R ++P F+G A + L+ IR++ YL+GTQL N
Sbjct: 847 MLGFYFQMLVISPLRVAIFQSPLFFPWKEWAMGVVHFKIICASVLMGP-----------DWWLKTAFEQIYADGIWNFQLKDLYINMVIPIGNALSFLIAFPYVASKFIMLFVEADRENQVIIIRYSYPFFLGSICIVAFLIWQWKKLKMLAQKIRNDKYLIGTQLVN 1003
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Match: A0A1W2W027_CIOIN (E3 ubiquitin-protein ligase MARCH6 n=1 Tax=Ciona intestinalis TaxID=7719 RepID=A0A1W2W027_CIOIN) HSP 1 Score: 56.2 bits (134), Expect = 6.250e-5 Identity = 42/166 (25.30%), Postives = 78/166 (46.99%), Query Frame = 1
Query: 553 MIGSVAQAVTVIPLRVPAGETPLLAPAQVWALGLVLLKVWMRCVTIGGFGGXXXXXXGLSWRRRLDRVRRNGVWGVNFTETMRDVVLPALNSVGEFYFMPLMFAKG-LLPLTF-TDPVRLAQLQRLTFPAFVGLKAAAAAGAAGLQFLQSCHDSIRDEMYLLGTQL 1044
M+G + V +IPLRVPA +TP++ Q WALG++L K+ C+ G + + ++ G+ ++ T+ D V P + ++ +P + G ++P+ F T+ A T+P + + ++ Q D I++E YL+G +L
Sbjct: 723 MMGVLFDLVVIIPLRVPAHQTPVIFLWQDWALGVLLFKLVTACLIFGPDN---------TIKTAIEEAYNQGLQRMSLKTTLTDTVFPVIKTLALCLTIP--YVTGHIIPVIFSTNETLTAFFYWRTYPLMISCASFICFCIFEIKQFQRLCDRIKNERYLIGKRL 877 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2027.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2027.5.1 >prot_P-wetherbeei_contig2027.5.1 ID=prot_P-wetherbeei_contig2027.5.1|Name=mRNA_P-wetherbeei_contig2027.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=358bp AAAAAAAAAAGVPAAPGRAPPAWVPVDPVAVAGGGPIPLRPAAAAGFAPAback to top mRNA from alignment at P-wetherbeei_contig2027:3210..4358- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2027.5.1 ID=mRNA_P-wetherbeei_contig2027.5.1|Name=mRNA_P-wetherbeei_contig2027.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig2027:3210..4358- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2027:3210..4358- >mRNA_P-wetherbeei_contig2027.5.1 ID=mRNA_P-wetherbeei_contig2027.5.1|Name=mRNA_P-wetherbeei_contig2027.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig2027:3210..4358- (Phaeothamnion wetherbeei SAG_119_79)back to top |