mRNA_P-wetherbeei_contig20266.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig20266.1.1
Unique Name	mRNA_P-wetherbeei_contig20266.1.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: A0A3C0TSD2_9PROT (Methionine synthase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TSD2_9PROT)

HSP 1 Score: 635 bits (1638), Expect = 3.690e-228
Identity = 325/366 (88.80%), Postives = 342/366 (93.44%), Query Frame = 1

Query:    1 MISTFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQV 1098
            M S FVNIGERTNVTGSA FKKLI+ GDYEAALAVARQQVE+GAQIIDVNMDEGLLDSQAAMVRFLNLIASEP+ISRVPVMIDSSKW VIEAGLKCVQGKAIVNSIS+KEGEE FLQQA L+RRYGAAVVVMAFDEKGQADTADRKFEICARSY LLT K+ FPPEDIIFDPNIFAVATGIEEHNNYAVEFFDA++RIK +LPYCRTSGGVSNVSF+FRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYE+IPKDLLERVEDVILNRRPDATERLLEIADN+RA    R E ADL+WR  +VEKRLE+ALVKGITEFII DTE AR+QA + LDVIEGPLM GMNVVGDLFGAGKMFLPQV
Sbjct:    1 MSSLFVNIGERTNVTGSAKFKKLIMEGDYEAALAVARQQVENGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPEISRVPVMIDSSKWQVIEAGLKCVQGKAIVNSISLKEGEEAFLQQAGLLRRYGAAVVVMAFDEKGQADTADRKFEICARSYGLLTQKIGFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAVKRIKRDLPYCRTSGGVSNVSFAFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEDIPKDLLERVEDVILNRRPDATERLLEIADNYRANA-ARAETADLAWRSENVEKRLEYALVKGITEFIIADTEEARRQAEKPLDVIEGPLMTGMNVVGDLFGAGKMFLPQV 365

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: A0A351T6E5_9PROT (Methionine synthase (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T6E5_9PROT)

HSP 1 Score: 633 bits (1633), Expect = 4.390e-224
Identity = 318/388 (81.96%), Postives = 354/388 (91.24%), Query Frame = 1

Query:    1 MISTFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            M+ TF+NIGERTN+TGSA FKKLIL+GD++AALAVARQQVE+GAQIID+NMDEGLLDS+AAMVRFLNLIASEP+ISRVP+MIDSSKW VIEAGLKCVQGK+IVNSIS+KEGE+ FL+QAK +RRYGAA VVMAFDE GQADTADRK+EIC RSY+LLT K  FPPEDIIFDPNIFAVATGIEEHNNYAV+FF+A +RIK  LPYCR SGGVSNVSFSFRGNNPVREAMH+VFLYH IRAGLDMGIVNAGQL VY +IP +LLERVEDVILNRRPDATERLLEIA+++R G  V++  ADL+WRE  V +RLE+ALVKGITEFII DTE AR  ATR ++VIEGPLM+GMN VGDLFGAGKMFLPQVVKSARVMKQAVAHL PFME+ER
Sbjct:    1 MLPTFINIGERTNITGSAKFKKLILDGDFDAALAVARQQVENGAQIIDINMDEGLLDSEAAMVRFLNLIASEPEISRVPIMIDSSKWSVIEAGLKCVQGKSIVNSISLKEGEDIFLEQAKTIRRYGAAAVVMAFDEAGQADTADRKYEICERSYRLLTEKAGFPPEDIIFDPNIFAVATGIEEHNNYAVDFFEATQRIKQNLPYCRVSGGVSNVSFSFRGNNPVREAMHSVFLYHGIRAGLDMGIVNAGQLTVYADIPPELLERVEDVILNRRPDATERLLEIAEDYR-GDNVKKAVADLAWRERPVTERLEYALVKGITEFIIADTEEARIAATRPIEVIEGPLMQGMNTVGDLFGAGKMFLPQVVKSARVMKQAVAHLTPFMERER 387

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: A0A081BF60_9HYPH (Methionine synthase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BF60_9HYPH)

HSP 1 Score: 606 bits (1563), Expect = 5.630e-209
Identity = 305/386 (79.02%), Postives = 346/386 (89.64%), Query Frame = 1

Query:    7 STFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            +TF+N+GERTNVTGSA FKKLILNGDYE ALAVAR QVE+GAQIIDVNMDEG+LDS+AAMVRFLNLIASEPDI+RVP+MIDSSKW VIEAGLKCVQGKAIVNSIS+KEG+EPF++QA+ ++RYGAAVVVMAFDE+GQADTA+RK+EIC RSYK+LT ++ FP EDIIFDPNIFAVATGIEEHNNYAV+F DA RRIK  LP+   SGGVSNVSFSFRGN  VREAMH+VFLYHAI+AG+DMGIVNAGQL +YEEI  +L E VEDVILNRR DATERLLE A+ ++A GG +QE  DLSWREA VE+RL+HALVKGIT++I  D E AR +A R L VIEGPLM GMNVVGDLFG+GKMFLPQVVKSARVMKQAVAHL+P+MEQE+
Sbjct:    6 ATFINVGERTNVTGSAKFKKLILNGDYEEALAVARSQVENGAQIIDVNMDEGMLDSEAAMVRFLNLIASEPDIARVPIMIDSSKWSVIEAGLKCVQGKAIVNSISLKEGKEPFVEQARKIKRYGAAVVVMAFDEEGQADTANRKYEICERSYKILTEEVGFPAEDIIFDPNIFAVATGIEEHNNYAVDFIDATRRIKQNLPHAHISGGVSNVSFSFRGNEKVREAMHSVFLYHAIQAGMDMGIVNAGQLAIYEEIEPELRELVEDVILNRREDATERLLEAAEKYKAEGGRKQE-EDLSWREAPVEERLKHALVKGITQYIEVDVEEARLKAERPLHVIEGPLMAGMNVVGDLFGSGKMFLPQVVKSARVMKQAVAHLMPYMEQEK 390

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: A0A1Y5U409_9PROT (Methionine synthase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5U409_9PROT)

HSP 1 Score: 603 bits (1555), Expect = 7.800e-208
Identity = 304/388 (78.35%), Postives = 340/388 (87.63%), Query Frame = 1

Query:    1 MISTFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            M  TFVNIGERTNVTGSA FKKLIL+GDYEAAL VARQQV++GAQIIDVNMDEGLLDSQ+AMVRFLNLIASEP+ISRVPVMIDSSKW +IEAGLKCVQGK+IVNSIS+KEGE PFL QA+ VRRYGA VVVMAFDE GQA+TA+RK  IC R+Y+LL  K+ FP EDIIFDPNIFAVATGIEEHN+YAV F +A RRIKAELP+ R SGGVSN+SFSFRGNNPVREAMH+VFLYHAIRAGLDMGIVNAGQL +YEEIP DL + VEDVILNRR DATERLL +A+ +R  GG  ++  DL WR+ADV  RL+HALVKGI  F++EDTE AR  A R ++VIEGPLM GMNVVGDLFG GKMFLPQVVKSARVMK+AVAHL+P++E ER
Sbjct:    1 MTPTFVNIGERTNVTGSARFKKLILDGDYEAALDVARQQVQNGAQIIDVNMDEGLLDSQSAMVRFLNLIASEPEISRVPVMIDSSKWAIIEAGLKCVQGKSIVNSISLKEGEAPFLAQARAVRRYGAGVVVMAFDEDGQAETAERKVAICTRAYRLLVDKVGFPAEDIIFDPNIFAVATGIEEHNDYAVAFIEATRRIKAELPHARVSGGVSNISFSFRGNNPVREAMHSVFLYHAIRAGLDMGIVNAGQLAIYEEIPADLRDCVEDVILNRRADATERLLTMAERYRGTGGGVRDANDLGWRDADVRARLKHALVKGIDTFVVEDTEEARLAADRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKKAVAHLIPYIEAER 388

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: UPI00143DCBCC (methionine synthase n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI00143DCBCC)

HSP 1 Score: 602 bits (1552), Expect = 1.630e-207
Identity = 302/384 (78.65%), Postives = 340/384 (88.54%), Query Frame = 1

Query:   13 FVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            FVNIGERTNVTGSA FKKLIL+GDY AAL VARQQVE+GAQIIDVNMDE +LDS+ AMV FLNLIASEPDISRVPVMIDSSKW VIEAGL+C+QGK IVNSIS+KEGEE F++QA+ ++RYGAAVVVMAFDE GQADT +RK+EIC RSY++LT K+ FPPEDIIFDPNIFAVATGIEEHNNY V+F +A RRIK  LPYC  SGGVSN+SFSFRGNNPVREAMH+VFLYHAI+AG+DMGIVNAG + VY EIP +L ERVEDVILNRRPDAT+RLLEIAD ++   G R +  DLSWREA VE+RL HALVKGIT +IIEDTE ARQ+A R L VIEGPLM GMNVVGDLFG+G+MFLPQVVKSARVMKQAVAHL+P++E E+
Sbjct:    7 FVNIGERTNVTGSAKFKKLILSGDYAAALDVARQQVEAGAQIIDVNMDEAMLDSEQAMVTFLNLIASEPDISRVPVMIDSSKWSVIEAGLQCLQGKGIVNSISLKEGEELFIEQARKIKRYGAAVVVMAFDEIGQADTEERKYEICERSYRVLTEKVGFPPEDIIFDPNIFAVATGIEEHNNYGVDFINATRRIKENLPYCHVSGGVSNISFSFRGNNPVREAMHSVFLYHAIQAGMDMGIVNAGMITVYSEIPAELRERVEDVILNRRPDATDRLLEIADKYKGEKGARPQ-EDLSWREAPVEERLAHALVKGITTYIIEDTEEARQKADRPLQVIEGPLMDGMNVVGDLFGSGQMFLPQVVKSARVMKQAVAHLIPYIEAEK 389

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: A0A7V2T6Z8_9PROT (Methionine synthase (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2T6Z8_9PROT)

HSP 1 Score: 596 bits (1537), Expect = 4.250e-207
Identity = 295/386 (76.42%), Postives = 335/386 (86.79%), Query Frame = 1

Query:    7 STFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            S FVN+GERTNVTGSA FK+LILN  Y+ AL VAR QVE GAQIIDVNMDEG+LD + AMV FLNLIASEPDI+RVPVM+DSSKWP++EAGLKC+QGK +VNSIS+KEGE+ FL+QAKL RRYGAAV+VMAFDE+GQADT +RK EIC R+Y+LL  KL+FPPEDIIFDPNIFAVATGIEEHNNY V+F +A R IK  LP+   SGGVSNVSFSFRGNNPVREA+HAVFLYHAI+AG+DMGIVNAGQL VYE+IP++L ERVEDVILNRRPDATERLLEIAD +R  G   ++ ADL WR   V KRLEHALVKGI  F++EDTE ARQQ  R + VIEGPLM GMNVVGDLFGAGKMFLPQVVKSARVMK+AVAHL+P++E E+
Sbjct:  348 SLFVNVGERTNVTGSAKFKRLILNEQYDEALDVARDQVEGGAQIIDVNMDEGMLDGEKAMVTFLNLIASEPDIARVPVMVDSSKWPILEAGLKCIQGKGVVNSISLKEGEDMFLEQAKLCRRYGAAVIVMAFDEEGQADTRERKVEICTRAYRLLREKLDFPPEDIIFDPNIFAVATGIEEHNNYGVDFIEATREIKQTLPHALVSGGVSNVSFSFRGNNPVREAIHAVFLYHAIQAGMDMGIVNAGQLAVYEDIPEELRERVEDVILNRRPDATERLLEIADKYRGDGSEAKKEADLEWRSWPVAKRLEHALVKGIDAFVVEDTEEARQQYDRPIQVIEGPLMDGMNVVGDLFGAGKMFLPQVVKSARVMKKAVAHLIPYIEAEK 733

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: UPI001BDEA305 (methionine synthase n=1 Tax=Glaciecola sp. XM2 TaxID=1914931 RepID=UPI001BDEA305)

HSP 1 Score: 597 bits (1540), Expect = 1.020e-205
Identity = 298/386 (77.20%), Postives = 341/386 (88.34%), Query Frame = 1

Query:    7 STFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            STFVN+GERTNVTGSA FK+LIL+ DYEAAL VARQQVE+GAQ+ID+NMDE +LDSQAAMVRFL LIASEPDISRVP+MIDSSKW +IEAGLKCVQGKAIVNSIS+KEGE PFL+QAK ++RYGAA VVMAFDEKGQADT  RKFEIC RSY+LL +KLNFPPEDIIFDPNIFAVATGIEEHNNYAV+F +A R+I+ ELP+C  SGG+SN+SFSFRGNNPVREAMH+VFLY+AIRAG+DMGIVNAGQL VY++IPK+L + VEDVILNR PDAT++LLE+A  ++ G G      DLSWRE  V KRLEHALVKGITE+I++DTE AR  A + L VIEGPLM GMNVVGDLFG GKMFLPQVVKSARVMK+AVA+L P++E E+
Sbjct:    6 STFVNVGERTNVTGSAMFKRLILSEDYEAALDVARQQVENGAQVIDINMDEAMLDSQAAMVRFLKLIASEPDISRVPIMIDSSKWSIIEAGLKCVQGKAIVNSISLKEGEAPFLEQAKKIKRYGAATVVMAFDEKGQADTQARKFEICKRSYELLVNKLNFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEATRQIRQELPHCHVSGGLSNISFSFRGNNPVREAMHSVFLYYAIRAGMDMGIVNAGQLEVYDQIPKELKDAVEDVILNRHPDATDKLLELAPKYQ-GDGKAAAVEDLSWREQSVNKRLEHALVKGITEYILDDTEEARANAQKPLHVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKKAVAYLQPYIEAEK 390

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: A0A348MXK0_9ALTE (Methionine synthase (Fragment) n=2 Tax=Glaciecola sp. TaxID=1905676 RepID=A0A348MXK0_9ALTE)

HSP 1 Score: 581 bits (1497), Expect = 1.080e-205
Identity = 288/386 (74.61%), Postives = 333/386 (86.27%), Query Frame = 1

Query:    7 STFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            S+F+NIGERTNVTGSA FK+LIL  DYE AL VA+QQVE+GAQIID+NMDE +LDS+AAMVRFLNLIASEPDISRVP+MIDSSKW VIEAGLKCVQGK++VNSIS+KEG+EPF+ QAKL++RYGAA VVMAFDE GQADT +RKF+IC RSY++L  ++ FPPEDIIFDPNIFAVATGIEEHNNYAV+F +A R+I+ ELPY   SGG+SN+SFSFRGNNPVREAMH+VFLYHAI+AG+DM IVNAGQL VY+EIPK+L + VEDVILNR   AT+ LLE+A  ++ G G   +  DL+WRE  V KRLEH LVKGIT+FIIEDTE AR  A + L VIEGPLM GMNVVGDLFG GKMFLPQVVKSARVMK+AV HL PF+E E+
Sbjct:    6 SSFINIGERTNVTGSAMFKRLILEEDYETALEVAKQQVENGAQIIDINMDEAMLDSEAAMVRFLNLIASEPDISRVPIMIDSSKWSVIEAGLKCVQGKSVVNSISLKEGKEPFIAQAKLIKRYGAATVVMAFDETGQADTVERKFDICERSYRILVDEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFIEATRKIRQELPYAHVSGGLSNISFSFRGNNPVREAMHSVFLYHAIKAGMDMAIVNAGQLEVYDEIPKELRDAVEDVILNRHDQATDNLLELAPKYQ-GDGKAAKVEDLAWRELPVNKRLEHGLVKGITDFIIEDTEEARLGAEKPLHVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKKAVGHLQPFIEDEK 390

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: UPI0004287C8D (methionine synthase n=1 Tax=Aestuariibacter salexigens TaxID=226010 RepID=UPI0004287C8D)

HSP 1 Score: 597 bits (1539), Expect = 1.360e-205
Identity = 299/387 (77.26%), Postives = 340/387 (87.86%), Query Frame = 1

Query:    4 ISTFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            I+TF+NIGERTNVTGSA FK+LIL GDYE AL VARQQVE+GAQIID+NMDE +LDS+AAMVRFLNLIASEPDISRVP+MIDSSKW VIEAGLKC+QGKAIVNSIS+KEGE PF++QA+ ++RYGAA VVMAFDEKGQA+TADRKF IC RSYK+LT ++ F PEDIIFDPNIFAVATGIEEHNNYAV+F +A RRI+  LPY   SGG+SN+SFSFRGNNPVREAMH+VFLYHAIRAGLDM IVNAGQL VY+EIP +L + VEDVILNRR DATERLL+IA  ++  G V     DL WR+A V KRLEHALVKGIT+FI EDTE ARQ+A + LDVIEGPLM GMNVVGDLFG GKMFLPQVVKSARVMK+AVA+L P++E+E+
Sbjct:    5 IATFINIGERTNVTGSAKFKRLILEGDYETALDVARQQVENGAQIIDINMDEAMLDSEAAMVRFLNLIASEPDISRVPIMIDSSKWSVIEAGLKCIQGKAIVNSISLKEGEAPFIEQARKIKRYGAATVVMAFDEKGQAETADRKFAICERSYKILTEQVGFAPEDIIFDPNIFAVATGIEEHNNYAVDFIEATRRIREHLPYAHVSGGLSNISFSFRGNNPVREAMHSVFLYHAIRAGLDMAIVNAGQLEVYDEIPIELRDAVEDVILNRRDDATERLLDIAPKYQGDGKVAAR-EDLQWRDAPVAKRLEHALVKGITDFIEEDTEQARQEAAKPLDVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKKAVAYLQPYIEREK 390

[Close]

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Match: UPI001BC44CBE (Methionine synthase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=UPI001BC44CBE)

HSP 1 Score: 598 bits (1541), Expect = 1.600e-205
Identity = 300/384 (78.12%), Postives = 338/384 (88.02%), Query Frame = 1

Query:   13 FVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVNMDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGKAIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEICARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKAELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQLMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADLSWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER 1164
            F+NIGERTNVTGSA F+KLILN DYEAAL VARQQVE+GAQIIDVNMDEG+LDS+AAMV++LNLIASEPDISRVP+MIDSSKW VIEAGLKCVQGKAIVNSISMKEGEE FL  AK + RYGAAVVVMAFDE+GQADTADRK+EICAR+YKLLT K+ FPPEDIIFDPNIFAVATGIEEHNNYAVEFF+  +RI+  LP+C  SGGVSNVSFSFRGN  VREAMHAVFLY+ ++ G+DMGIVNAGQL VYE+IP +L ERVEDV+LNRRPDATER+LEIA+ F+  GG R +  D+SWR+ +V  RL HALV GI +FI EDTE AR    + L+VIEGPLM GMNVVGDLFGAGKMFLPQVVKSARVMK+AVA+LLPF+E E+
Sbjct:   22 FINIGERTNVTGSAKFRKLILNDDYEAALVVARQQVENGAQIIDVNMDEGMLDSKAAMVKYLNLIASEPDISRVPIMIDSSKWDVIEAGLKCVQGKAIVNSISMKEGEEAFLMYAKKILRYGAAVVVMAFDEQGQADTADRKYEICARAYKLLTEKIGFPPEDIIFDPNIFAVATGIEEHNNYAVEFFEGAKRIRENLPHCHISGGVSNVSFSFRGNEQVREAMHAVFLYYGMQNGMDMGIVNAGQLPVYEDIPTELRERVEDVLLNRRPDATERMLEIAERFK--GGARSQEVDMSWRQKEVRARLTHALVHGIADFIDEDTEEARHIVAKPLEVIEGPLMDGMNVVGDLFGAGKMFLPQVVKSARVMKKAVAYLLPFIEAEK 403

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig20266.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3C0TSD2_9PROT	3.690e-228	88.80	Methionine synthase (Fragment) n=1 Tax=Alphaproteo...	[more]
A0A351T6E5_9PROT	4.390e-224	81.96	Methionine synthase (Fragment) n=2 Tax=Alphaproteo...	[more]
A0A081BF60_9HYPH	5.630e-209	79.02	Methionine synthase n=1 Tax=Tepidicaulis marinus T...	[more]
A0A1Y5U409_9PROT	7.800e-208	78.35	Methionine synthase n=1 Tax=Oceanibacterium hippoc...	[more]
UPI00143DCBCC	1.630e-207	78.65	methionine synthase n=1 Tax=Luteithermobacter gela...	[more]
A0A7V2T6Z8_9PROT	4.250e-207	76.42	Methionine synthase (Fragment) n=1 Tax=Rhodospiril...	[more]
UPI001BDEA305	1.020e-205	77.20	methionine synthase n=1 Tax=Glaciecola sp. XM2 Tax...	[more]
A0A348MXK0_9ALTE	1.080e-205	74.61	Methionine synthase (Fragment) n=2 Tax=Glaciecola ...	[more]
UPI0004287C8D	1.360e-205	77.26	methionine synthase n=1 Tax=Aestuariibacter salexi...	[more]
UPI001BC44CBE	1.600e-205	78.13	Methionine synthase n=2 Tax=Alphaproteobacteria Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig20266	contig	P-wetherbeei_contig20266:48..1211 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	1333998.M2A_3177
Preferred name	metH
PFAMs	B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans
Model size	1164
Max annot lvl	28211\|Alphaproteobacteria
KEGG rclass	RC00035,RC00113,RC01241
KEGG ko	ko:K00548
KEGG Reaction	R00946,R09365
KEGG Pathway	ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230
KEGG Module	M00017
Hectar predicted targeting category	other localisation
GOs	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons	1
Evalue	9.23e-210
EggNOG OGs	COG1410@1\|root,COG1410@2\|Bacteria,1MV6G@1224\|Proteobacteria,2TQTG@28211\|Alphaproteobacteria
EC	2.1.1.13
Description	Methionine synthase
Cds size	1164
COG category	E
BRITE	ko00000,ko00001,ko00002,ko01000

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186195.1154704-CDS-P-wetherbeei_contig20266:47..1211	1683186195.1154704-CDS-P-wetherbeei_contig20266:47..1211	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig20266 48..1211 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig20266.1.1	prot_P-wetherbeei_contig20266.1.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig20266 48..1211 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig20266:48..1211+
coding sequence from alignment at P-wetherbeei_contig20266:48..1211+

protein sequence of mRNA_P-wetherbeei_contig20266.1.1

>prot_P-wetherbeei_contig20266.1.1 ID=prot_P-wetherbeei_contig20266.1.1|Name=mRNA_P-wetherbeei_contig20266.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=388bp
MISTFVNIGERTNVTGSAAFKKLILNGDYEAALAVARQQVESGAQIIDVN
MDEGLLDSQAAMVRFLNLIASEPDISRVPVMIDSSKWPVIEAGLKCVQGK
AIVNSISMKEGEEPFLQQAKLVRRYGAAVVVMAFDEKGQADTADRKFEIC
ARSYKLLTSKLNFPPEDIIFDPNIFAVATGIEEHNNYAVEFFDAIRRIKA
ELPYCRTSGGVSNVSFSFRGNNPVREAMHAVFLYHAIRAGLDMGIVNAGQ
LMVYEEIPKDLLERVEDVILNRRPDATERLLEIADNFRAGGGVRQEGADL
SWREADVEKRLEHALVKGITEFIIEDTEAARQQATRSLDVIEGPLMRGMN
VVGDLFGAGKMFLPQVVKSARVMKQAVAHLLPFMEQER

mRNA from alignment at P-wetherbeei_contig20266:48..1211+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig20266.1.1 ID=mRNA_P-wetherbeei_contig20266.1.1|Name=mRNA_P-wetherbeei_contig20266.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig20266:48..1211+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTTCAACATTTGTAAATATTGGCGAGCGCACCAATGTCACCGGGTC
GGCGGCTTTCAAAAAGCTTATCCTGAATGGCGATTATGAGGCTGCCCTTG
CGGTTGCGCGGCAACAGGTGGAAAGCGGCGCGCAGATCATCGATGTGAAC
ATGGATGAGGGGCTGCTGGACAGTCAGGCTGCGATGGTGCGGTTTCTAAA
CCTGATTGCGTCCGAACCTGATATCAGCCGCGTCCCGGTAATGATCGATT
CGTCCAAATGGCCGGTCATTGAGGCGGGTCTGAAATGTGTGCAGGGCAAG
GCCATCGTCAATTCGATCAGCATGAAAGAGGGCGAGGAACCGTTTCTGCA
ACAGGCCAAACTGGTGCGCCGTTATGGCGCCGCCGTTGTGGTGATGGCGT
TCGATGAAAAGGGGCAGGCCGATACGGCGGACCGCAAGTTTGAAATTTGC
GCGCGTTCCTACAAATTGCTGACTTCGAAACTCAATTTTCCGCCGGAAGA
CATTATTTTCGATCCCAATATTTTTGCAGTGGCGACCGGGATCGAGGAGC
ATAATAATTATGCGGTCGAATTTTTCGATGCGATCCGGCGCATCAAGGCG
GAATTGCCTTATTGCCGCACCTCCGGCGGTGTTTCCAACGTGTCTTTTTC
ATTTCGCGGCAATAATCCGGTGCGCGAGGCGATGCATGCTGTGTTTTTGT
ACCACGCCATCCGCGCCGGGCTGGACATGGGCATCGTCAATGCCGGCCAG
CTGATGGTGTATGAGGAAATTCCGAAAGATCTGCTGGAGCGCGTCGAGGA
CGTCATTCTTAATCGCCGCCCGGATGCGACCGAACGCCTGCTGGAAATTG
CCGATAATTTCCGCGCCGGTGGCGGCGTTCGTCAGGAGGGGGCCGATCTT
TCGTGGCGCGAAGCGGATGTCGAAAAACGGCTGGAACATGCGCTGGTCAA
GGGCATTACGGAATTTATCATCGAGGATACGGAAGCGGCGCGCCAACAGG
CCACACGGTCGCTGGATGTGATTGAAGGCCCGCTGATGCGCGGCATGAAT
GTGGTCGGCGATCTGTTTGGGGCTGGCAAAATGTTTCTGCCCCAGGTGGT
GAAAAGCGCGCGCGTGATGAAACAGGCCGTCGCGCATCTGCTGCCCTTCA
TGGAGCAGGAGCGT

Coding sequence (CDS) from alignment at P-wetherbeei_contig20266:48..1211+

>mRNA_P-wetherbeei_contig20266.1.1 ID=mRNA_P-wetherbeei_contig20266.1.1|Name=mRNA_P-wetherbeei_contig20266.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1164bp|location=Sequence derived from alignment at P-wetherbeei_contig20266:48..1211+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTTCAACATTTGTAAATATTGGCGAGCGCACCAATGTCACCGGGTC
GGCGGCTTTCAAAAAGCTTATCCTGAATGGCGATTATGAGGCTGCCCTTG
CGGTTGCGCGGCAACAGGTGGAAAGCGGCGCGCAGATCATCGATGTGAAC
ATGGATGAGGGGCTGCTGGACAGTCAGGCTGCGATGGTGCGGTTTCTAAA
CCTGATTGCGTCCGAACCTGATATCAGCCGCGTCCCGGTAATGATCGATT
CGTCCAAATGGCCGGTCATTGAGGCGGGTCTGAAATGTGTGCAGGGCAAG
GCCATCGTCAATTCGATCAGCATGAAAGAGGGCGAGGAACCGTTTCTGCA
ACAGGCCAAACTGGTGCGCCGTTATGGCGCCGCCGTTGTGGTGATGGCGT
TCGATGAAAAGGGGCAGGCCGATACGGCGGACCGCAAGTTTGAAATTTGC
GCGCGTTCCTACAAATTGCTGACTTCGAAACTCAATTTTCCGCCGGAAGA
CATTATTTTCGATCCCAATATTTTTGCAGTGGCGACCGGGATCGAGGAGC
ATAATAATTATGCGGTCGAATTTTTCGATGCGATCCGGCGCATCAAGGCG
GAATTGCCTTATTGCCGCACCTCCGGCGGTGTTTCCAACGTGTCTTTTTC
ATTTCGCGGCAATAATCCGGTGCGCGAGGCGATGCATGCTGTGTTTTTGT
ACCACGCCATCCGCGCCGGGCTGGACATGGGCATCGTCAATGCCGGCCAG
CTGATGGTGTATGAGGAAATTCCGAAAGATCTGCTGGAGCGCGTCGAGGA
CGTCATTCTTAATCGCCGCCCGGATGCGACCGAACGCCTGCTGGAAATTG
CCGATAATTTCCGCGCCGGTGGCGGCGTTCGTCAGGAGGGGGCCGATCTT
TCGTGGCGCGAAGCGGATGTCGAAAAACGGCTGGAACATGCGCTGGTCAA
GGGCATTACGGAATTTATCATCGAGGATACGGAAGCGGCGCGCCAACAGG
CCACACGGTCGCTGGATGTGATTGAAGGCCCGCTGATGCGCGGCATGAAT
GTGGTCGGCGATCTGTTTGGGGCTGGCAAAATGTTTCTGCCCCAGGTGGT
GAAAAGCGCGCGCGTGATGAAACAGGCCGTCGCGCATCTGCTGCCCTTCA
TGGAGCAGGAGCGT