mRNA_P-wetherbeei_contig20258.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A7C0UUH5_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C0UUH5_9PROT) HSP 1 Score: 131 bits (329), Expect = 1.610e-35 Identity = 69/173 (39.88%), Postives = 110/173 (63.58%), Query Frame = 1
Query: 4 MRKSFVYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEK-LDLLFQCKPTNSRKTAQHLVPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVR 519
M+K V ++L D+ G+V++VTDVL R GANLE+SRMA LG EF+ ++L +V E K +L M A E+ L ++ + + K VP +++V G D+EGIV+ + +L QG ++E L + V NAP +G+PLF MR V+ P +S LR+++ +A++ VDI+++
Sbjct: 1 MKKEMVITILSEDKPGIVERVTDVLLRYGANLEESRMARLGGEFAGIMLITVDESKMDDLTRAMDALKEQSLSVIAKATDPSVAKRYAGYVPYEIKVSGADHEGIVHGIAEYLAAQGANIEELSTDVTNAPITGIPLFSMRAVVEVPPKISTTELREKLAYIAEEQGVDIEIK 173
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A7W1BFJ4_9BACT (Transcriptional regulator n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7W1BFJ4_9BACT) HSP 1 Score: 125 bits (313), Expect = 3.830e-33 Identity = 72/173 (41.62%), Postives = 109/173 (63.01%), Query Frame = 1
Query: 4 MRKSFVYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCKPTNSRKTA-QHLVPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVR 519
M V + G DR G+V +VT+VL +GAN+E++RMA LG EF+ ++L +V + + L A + A+ E+ DL +PT Q VP +V + G D++GI++ V L QGI++E+LD++V NAP +GV LF M VQAP VS LR +++ +AD+L VDI+V+
Sbjct: 1 MSTHLVVTAAGRDRPGIVQRVTEVLVAHGANVEEARMARLGGEFAAILLVAVPQPRVTGLNAGL-ASLERDDLHVLTRPTTKAADLFQGYVPFEVHLSGADHQGILHRVSDFLAGQGINIESLDTEVTNAPVTGVALFSMHALVQAPPDVSFGELRTRLREIADRLGVDIEVK 172
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A4U1H8K9_9DELT (Transcriptional regulator n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1H8K9_9DELT) HSP 1 Score: 117 bits (292), Expect = 7.470e-30 Identity = 66/172 (38.37%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 19 VYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCK----PTNSRKTAQHLVPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVRA 522
V S LG DR GLV +VTD + + N+EDSRMA+LG EF +++L + ++ A +E ++ + SEK L + + P R+ A +P V + +D+EGIV V R L G+++ +L++ AP +G PLF M RV P VS+ +RK M VA++ N+DI+V++
Sbjct: 12 VLSCLGPDRPGLVAEVTDYVSGHSGNVEDSRMAVLGAEFGILLLVAGTPDEIAAIERDLPSLSEKTGLDIRARRTKAPEEHRRAAT--IPCIVTAEALDHEGIVRSVTRALAGAGVNIVSLEATAYEAPVTGSPLFRMEARVDLPPGVSVGKVRKAMDAVAEEQNLDIEVKS 181
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A4P2QCS3_SORCE (Glycine cleavage system protein R n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2QCS3_SORCE) HSP 1 Score: 117 bits (292), Expect = 7.890e-30 Identity = 70/170 (41.18%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 19 VYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCKPTNSRKTAQHL--VPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVRA 522
V S LG DR GLV +VT L GAN+EDSRMA+LG EF +++L S +E E A + L Q + T S + + +P + V +D+EGIV V R L G+++ +L++ AP +G LF M RV P+ V+LA LRK M VA+ N+DIDVR+
Sbjct: 14 VLSCLGPDRPGLVAEVTHFLTERGANVEDSRMAVLGGEFGILVLASGPPGAIEAIEREAGALTTTTGLTVQSRRTKSPEAHRRAATIPCLISVDALDHEGIVRAVSRALHGAGVNIVSLETSAYEAPVTGSQLFRMEARVDVPSGVTLAQLRKAMDAVAESENLDIDVRS 183
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A2L0FB27_SORCE (Glycine cleavage system protein R n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0FB27_SORCE) HSP 1 Score: 116 bits (290), Expect = 1.620e-29 Identity = 69/170 (40.59%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 19 VYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCKPTNSRKTAQHL--VPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVRA 522
V S LG DR GLV +VT L +GAN+EDSRMA+LG EF +++L S A +E + + + L Q + T S ++ + +P + V +D+EGIV V R L G+++ +L++ AP +G LF M RV P V+LA LRK M VAD N+DI+VR+
Sbjct: 15 VLSCLGPDRPGLVAEVTHYLTEHGANVEDSRMAVLGGEFGILLLASGPPGAIAAIERDAGSLTAATGLTVQSRRTKSPESHRRAATIPCVISVDALDHEGIVRAVSRALHGAGVNIVSLETSAYEAPVTGSQLFRMEARVDVPAGVTLAQLRKAMDAVADAENLDIEVRS 184
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A6M8WE39_9PROT (Glycine cleavage system protein R n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8WE39_9PROT) HSP 1 Score: 115 bits (288), Expect = 2.330e-29 Identity = 59/168 (35.12%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 4 MRKSFVYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCKPTNSRKTAQHLVPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVD 507
M V S LG DR+G+VD++ V+ G N+EDSRMA+LG EF++M+L S A +E + +L L K T R++ +HL+P V+V +D+ GIV ++ + I++E++ + A ++G P+F +R+ V P ++ +A+LR + + D+LNVD
Sbjct: 1 MLNYLVISALGEDRSGIVDRLAKVVLDGGCNIEDSRMAVLGGEFAVMLLISGQWNNIAKVENSLERVGSELGLTVSAKRTEGRRSRRHLMPYAVDVVSLDHPGIVYNLAHFFSSRDINIEDMTTSSYAAAHTGAPMFSVRLIVDIPAALQIAALRDEFLDFCDELNVD 168
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A9G5H2_SORC5 (Putative Glycine cleavage system regulatory protein n=11 Tax=Sorangium cellulosum TaxID=56 RepID=A9G5H2_SORC5) HSP 1 Score: 114 bits (285), Expect = 9.090e-29 Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 19 VYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCKPTNSRKTAQHL--VPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVRA 522
V S LG DRTG+V +VT L GAN+EDSRMA+LG EF +++L S +E E + + L Q + T S ++ + +P + V +D+EGIV V R L G+++ +L++ AP +G LF M RV P V++ LRK M VA+ N+DIDVR+
Sbjct: 15 VLSCLGPDRTGIVAEVTHYLTERGANVEDSRMAVLGGEFGILLLASGPPGAIEAVERETESLTRATGLTVQSRRTKSPESHRRAATIPCVISVDALDHEGIVRAVSRALHGVGVNIVSLETSAYEAPVTGSQLFRMEARVDVPAGVTVTQLRKAMDAVAETENLDIDVRS 184
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A432ML92_9BACT (Transcriptional regulator n=1 Tax=Tautonia sociabilis TaxID=2080755 RepID=A0A432ML92_9BACT) HSP 1 Score: 114 bits (284), Expect = 9.830e-29 Identity = 65/174 (37.36%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 4 MRKSFVYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEA---EMRAASEKLDLLFQCKPTNSRKTAQHLVPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDV 516
M K FV +L G DR GLV+++T +L G N+E SRMA LG EF++++L SV EE+SA L+ E+ ++ L +P + +P ++EV+G D+EGI++ V RHL +QGIS+E ++++ +AP+ G PLF M RV P ++ ++ + + ++N++I V
Sbjct: 1 MPKDFVLTLTGPDRIGLVEELTRLLFELGGNVEASRMARLGGEFAVLMLVSVPEEQSAGLDHRLDELFLEGYRITLSATQRPFPGERP--DWLPFRIEVEGADDEGIIHRVARHLSQQGISIEEMETETTSAPFGGAPLFNMVARVVVPPELADRPWQEGLAAIGREMNLEIRV 172
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A1Y1RUW7_9SPIO (ACT domain-containing protein n=1 Tax=Marispirochaeta aestuarii TaxID=1963862 RepID=A0A1Y1RUW7_9SPIO) HSP 1 Score: 113 bits (283), Expect = 1.320e-28 Identity = 57/171 (33.33%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 16 FVYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCKPTNSRKTAQHLVPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVRAKN 528
FV++ +G+DR G+VD++ VL N+E+SRMA+LG EFS+M+L S + LE ++ +KL L Q +PT + + + P +E +D GI++ V L G+++E + ++ +AP++G +F+MR + P V +A LR Q++N+ + ++DI ++ N
Sbjct: 5 FVFTAIGTDRVGIVDEIAAVLEAENCNIEESRMAVLGTEFSVMLLASGGQGIVQILEKDLPDIGDKLGLHVQIRPTRAPRGSSEGRPYSIEAISLDAPGIMHAVTAVLKRAGVNIEEISTETTSAPWTGATMFQMRGTLIVPREVHIAELRDQLENLEHERDIDIVLKPLN 175
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Match: A0A1G3QFF2_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium RBG_13_51_14 TaxID=1802193 RepID=A0A1G3QFF2_9SPIR) HSP 1 Score: 113 bits (282), Expect = 2.020e-28 Identity = 60/171 (35.09%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 19 VYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCSVAEEKSANLEAEMRAASEKLDLLFQCKPT---NSRKTAQHLVPLQVEVKGMDNEGIVNDVVRHLLEQGISVENLDSQVVNAPYSGVPLFEMRIRVQAPTSVSLASLRKQMQNVADQLNVDIDVRA 522
V + +G DR GLVD+++ L N+EDSRMA+LG EF++++L S + S L E+ A + L KPT + RK Q L P ++ MD+ GIV++V R L ++ I++E++++ + +AP SG P+F+M+ + P L+++RK+++ + D++++DI++ A
Sbjct: 6 VLTAIGPDRPGLVDEISAFLADRNINIEDSRMAVLGGEFAVILLASGEPDFSDRLIRELAAIEKITGLAVHLKPTLAPHERKVHQSL-PHRLTATSMDHPGIVHEVTRVLHKRNINIESMETHLAHAPVSGAPIFKMKCVINIPVEEKLSAVRKELEKLGDRMDIDIEIEA 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20258.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20258.2.1 >prot_P-wetherbeei_contig20258.2.1 ID=prot_P-wetherbeei_contig20258.2.1|Name=mRNA_P-wetherbeei_contig20258.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp MRKSFVYSLLGSDRTGLVDQVTDVLRRNGANLEDSRMAILGEEFSMMILCback to top mRNA from alignment at P-wetherbeei_contig20258:315..845- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20258.2.1 ID=mRNA_P-wetherbeei_contig20258.2.1|Name=mRNA_P-wetherbeei_contig20258.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig20258:315..845- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20258:315..845- >mRNA_P-wetherbeei_contig20258.2.1 ID=mRNA_P-wetherbeei_contig20258.2.1|Name=mRNA_P-wetherbeei_contig20258.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig20258:315..845- (Phaeothamnion wetherbeei SAG_119_79)back to top |