mRNA_P-wetherbeei_contig20250.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20250.2.1
Unique NamemRNA_P-wetherbeei_contig20250.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A0T2YQB8_9BURK (AMP-binding domain-containing protein n=2 Tax=Hydrogenophaga sp. Root209 TaxID=1736490 RepID=A0A0T2YQB8_9BURK)

HSP 1 Score: 656 bits (1692), Expect = 2.500e-232
Identity = 311/386 (80.57%), Postives = 343/386 (88.86%), Query Frame = 1
Query:   16 PQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            PQTLPQWL+HNAATR +EVAQRHKR+GVWKEFSW  VRDEVRA+A+GLRARGVQRGQTV+L+ ENRPELYWAEWAAMA+GAK VALYPDA E E++YV  DAQAVCVFAEDQEQVDKVLP+ ARH  LHTVV+WE+GGLWSY  AGL+ WDALK +AHPVGPAD QWFE  VAQGQ SDIA+L+YTSGTTG PKGVI THASL HNA+L+  T++VPE CEYLSYIPLSWATEQW GVT+GLMRP+RV+FAE PDQIQEAIRELAC+MVFFGPRQWESLAARVHARMLDAP WRQK+VDWG+ IGRL RAD  +     WW RALLP+ADALVLRPLR+QLGLKRA IA TGGAAVAPDIFRLFAAMGVMLRN+YGCSE GL+ VH
Sbjct:    9 PQTLPQWLLHNAATRGSEVAQRHKREGVWKEFSWADVRDEVRALAIGLRARGVQRGQTVVLLSENRPELYWAEWAAMAVGAKVVALYPDAAETEVNYVVEDAQAVCVFAEDQEQVDKVLPLMARHDALHTVVWWESGGLWSYQHAGLLGWDALKASAHPVGPADDQWFEHEVAQGQSSDIAVLSYTSGTTGAPKGVITTHASLMHNAELIGHTMQVPEGCEYLSYIPLSWATEQWVGVTMGLMRPLRVNFAERPDQIQEAIRELACEMVFFGPRQWESLAARVHARMLDAPPWRQKVVDWGVRIGRLARADQLDTRARAWWVRALLPVADALVLRPLREQLGLKRAHIAFTGGAAVAPDIFRLFAAMGVMLRNIYGCSEFGLITVH 394          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A315BP95_9BURK (AMP-binding domain-containing protein n=1 Tax=Limnohabitans sp. WS1 TaxID=1100726 RepID=A0A315BP95_9BURK)

HSP 1 Score: 647 bits (1668), Expect = 3.120e-228
Identity = 308/386 (79.79%), Postives = 338/386 (87.56%), Query Frame = 1
Query:   16 PQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            PQTLPQWL+HNAATRP+EVAQRHKRDG+WKEFSW  VRDEVR +ALGLRARGVQRGQTV+L+ ENRPELYWAEWAA AIGAK VALYPDATE E+DYV  DAQAVCVFAEDQEQVDKVLP+ +R++GLHTVV+WE+GGLWSY   GL+ WDA K  A P    DA WFEQV+AQGQ  DIALL YTSGTTG PKGVI THAS+ HNADL+ Q++++P+ CEYLSYIPLSWATEQW GVTLGL+RPMRVSFAE PDQIQEAIRELAC+MVFFGPRQWESLAARVH RMLDAP WRQ +VDWGL IGRL RA+  +    PWW RALLPLADALVLRPLRDQLGL+RA+IA TGGAAVAPDIFRLFAAMGVMLRNVYGCSE GL+ VH
Sbjct:    8 PQTLPQWLLHNAATRPDEVAQRHKRDGIWKEFSWADVRDEVRELALGLRARGVQRGQTVVLMSENRPELYWAEWAAQAIGAKVVALYPDATETEVDYVVQDAQAVCVFAEDQEQVDKVLPLMSRYTGLHTVVWWESGGLWSYRQDGLLGWDAFKAPARPAKSEDAAWFEQVIAQGQSKDIALLLYTSGTTGAPKGVITTHASMLHNADLIGQSVQLPQGCEYLSYIPLSWATEQWVGVTLGLIRPMRVSFAERPDQIQEAIRELACEMVFFGPRQWESLAARVHTRMLDAPPWRQSVVDWGLRIGRLARAEQMDTTQRPWWVRALLPLADALVLRPLRDQLGLQRAKIAFTGGAAVAPDIFRLFAAMGVMLRNVYGCSEFGLVTVH 393          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A3A4RF86_9BURK (Long-chain fatty acid--CoA ligase n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A3A4RF86_9BURK)

HSP 1 Score: 647 bits (1668), Expect = 3.580e-228
Identity = 309/389 (79.43%), Postives = 338/389 (86.89%), Query Frame = 1
Query:    7 EHNPQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            E  PQTLPQWL+HNAATRPNEVAQRHKR+GVWKEFSW  VRDEVRA+ALGLRARGVQRGQTV+L+ ENRPELYWAEWAAMA+GAK VALYPDA E+E++YV  DAQAVCVFAEDQEQVDKVLPV ARH  L TVV+WE+GGLWSY   GL+ WDA +  A P+ P D  WFEQ VAQG+  DIA+L+YTSGTTG PKGVI THASL HNA+L+ QT+RVPE  EYLSYIPLSWATEQW GVT+GLMRP+RVSFAE PDQIQEAIRELAC++VFFGPRQWESLAARVHARMLDA  WRQK+VDWGL IGRL RAD  +     WW RALLP+ADALVLRPLR+QLGLKRARIA TGGAAVAPDIFRLFAAMGVMLRNVYGCSE GL+ VH
Sbjct:    6 EQKPQTLPQWLLHNAATRPNEVAQRHKREGVWKEFSWADVRDEVRALALGLRARGVQRGQTVVLLSENRPELYWAEWAAMAVGAKVVALYPDAAESEVNYVVEDAQAVCVFAEDQEQVDKVLPVMARHDALRTVVWWESGGLWSYRNEGLLGWDAFRAPAQPIQPTDEAWFEQAVAQGRSGDIAVLSYTSGTTGAPKGVITTHASLMHNAELIGQTMRVPEGAEYLSYIPLSWATEQWVGVTMGLMRPLRVSFAEQPDQIQEAIRELACEIVFFGPRQWESLAARVHARMLDAAPWRQKVVDWGLRIGRLARADQLDTRARAWWVRALLPVADALVLRPLREQLGLKRARIAFTGGAAVAPDIFRLFAAMGVMLRNVYGCSEFGLITVH 394          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: UPI0005ABFE51 (AMP-binding protein n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=UPI0005ABFE51)

HSP 1 Score: 642 bits (1656), Expect = 3.020e-226
Identity = 311/392 (79.34%), Postives = 339/392 (86.48%), Query Frame = 1
Query:   16 PQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQ------WFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            PQTLPQWLVHNAATRP+EVAQRHK +GVWKEFSW  VRDEVRA+ALGLR RGV+RGQTVLL+GENRPELYWAEWAAMA+GAK VALYPDATEAE+DYV  DA+AVCVFAEDQEQVDKVLPV ARH GLH+VV+WE+GGLWSY   GL+ WDALK  AH     DAQ      WF Q VA+G+  DIA+L+YTSGTTG PKGVI THASL HNA L+  T++VPE  EYLSYIPLSW+TEQW GVTLGLMRP+RV+FAE PDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAP WRQK+VDWGL IGRL RA+  +  T  WW RALLPLADALVLRPLR+QLGLKRARIA TGGAAVAPDIFRLFA+MGVMLRNVYGCSE GL+ VH
Sbjct:   10 PQTLPQWLVHNAATRPDEVAQRHKCEGVWKEFSWAGVRDEVRALALGLRERGVRRGQTVLLLGENRPELYWAEWAAMAVGAKVVALYPDATEAELDYVVSDAKAVCVFAEDQEQVDKVLPVKARHEGLHSVVWWESGGLWSYEQPGLLGWDALKATAHRAASTDAQRLADERWFAQAVAEGRSIDIAVLSYTSGTTGAPKGVITTHASLMHNAQLIGNTMQVPEGGEYLSYIPLSWSTEQWVGVTLGLMRPLRVNFAEKPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPAWRQKVVDWGLRIGRLARAEQLDTTTRAWWVRALLPLADALVLRPLREQLGLKRARIAFTGGAAVAPDIFRLFASMGVMLRNVYGCSEFGLISVH 401          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A4Q5XTV2_9BURK (Long-chain fatty acid--CoA ligase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5XTV2_9BURK)

HSP 1 Score: 634 bits (1634), Expect = 8.080e-223
Identity = 308/394 (78.17%), Postives = 335/394 (85.03%), Query Frame = 1
Query:   16 PQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHP--------VGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            PQTLPQWL+HNAATR  EVAQRHKR+GVWKEFSW  VRDEVRA+ALGLR+RGVQRGQTVLLI ENRPELYWAEWAAMAIGAK VALYPDA EAE+DYV  DAQAVCVFAEDQEQVDKVLP+ ARH GLHTVV+WE+GGLWSY   GL+ WDALK  A P           A   WFE+ VAQGQ  DIA+L+YTSGTTG PKGVI THASL HNA+LL  T++VP  CEYLSYIPLSW+TEQW GVT+GLMRP+RVSFAE PDQIQEAIRELAC+MVFFGPRQWESLAARVHARMLDA  WR+++VDWGL IGRL RA+  +  T  WW RA LPLADALVLRPLR+QLGLKRARIA TGGAAVAPDIFRLFA+MGVMLRNVYGCSE GL+ VH
Sbjct:   14 PQTLPQWLLHNAATRGGEVAQRHKREGVWKEFSWADVRDEVRALALGLRSRGVQRGQTVLLISENRPELYWAEWAAMAIGAKVVALYPDAAEAEVDYVVADAQAVCVFAEDQEQVDKVLPLMARHGGLHTVVWWESGGLWSYRQDGLLGWDALKACARPDADXXXXXXXXAAGPWFERSVAQGQSGDIAVLSYTSGTTGSPKGVITTHASLMHNAELLGDTMQVPSGCEYLSYIPLSWSTEQWVGVTMGLMRPLRVSFAEQPDQIQEAIRELACEMVFFGPRQWESLAARVHARMLDASAWRRRVVDWGLRIGRLARAEQLDTSTRAWWVRAALPLADALVLRPLREQLGLKRARIAFTGGAAVAPDIFRLFASMGVMLRNVYGCSEFGLISVH 407          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A520GDL1_9BURK (Acyl-CoA synthetase n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520GDL1_9BURK)

HSP 1 Score: 528 bits (1361), Expect = 2.690e-182
Identity = 266/386 (68.91%), Postives = 289/386 (74.87%), Query Frame = 1
Query:   16 PQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            PQTLPQWL HNAATR  EVAQRHKRDGVWKEFSW  VR+EVRA+ALGLR RGVQRGQTV+L+ ENRPE                                            EQVDKVLPV AR   L TVV+WE+GGLWSY   GL  WDA +TA     P DA WFEQ VAQGQ SDIA+L YTSGTTG PKGVI THASL HNADL+  T++VPE  EYLSYIPLSWATEQW GVT+GLMRP+RV+FAE PDQIQEA RELAC+MVFFGPRQWESLAARVHARMLDA  WRQK+VDWGL IG+L RA+  +     WW RALLP+ADALVLRPLR+QLGLKRARIA TGGAAVAPDIFRLFA+MGVMLRNVYGCSE GL+ VH
Sbjct:    9 PQTLPQWLAHNAATRGTEVAQRHKRDGVWKEFSWNDVRNEVRALALGLRERGVQRGQTVVLLSENRPE--------------------------------------------EQVDKVLPVMARSPALRTVVWWESGGLWSYRNEGLFGWDAFRTAERDTKPEDAAWFEQSVAQGQSSDIAVLAYTSGTTGAPKGVITTHASLLHNADLIGNTMQVPEGSEYLSYIPLSWATEQWVGVTMGLMRPLRVNFAERPDQIQEATRELACEMVFFGPRQWESLAARVHARMLDAAPWRQKVVDWGLRIGKLARAEQMDIRARAWWVRALLPVADALVLRPLREQLGLKRARIAFTGGAAVAPDIFRLFASMGVMLRNVYGCSEFGLITVH 350          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A4Q5VSI8_9BURK (Acyl-CoA synthetase (Fragment) n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5VSI8_9BURK)

HSP 1 Score: 491 bits (1264), Expect = 3.640e-169
Identity = 236/312 (75.64%), Postives = 263/312 (84.29%), Query Frame = 1
Query:  238 AAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            AAMA+GAK VALYPDA+EAE+DY+  DAQAVCVFAEDQEQVDKVLPV ARH+GLHTVV+WE+GGLWSY  AGL+ WDA +T      P+DA WFE+ +AQG+  DIA+L+YTSGTTG PKGVI TH SL HNA L+  T+ VP   EYLSYIPLSWATEQW GV LGLM P+RV+FAE PDQIQEAIRELAC+MVFFGPRQWESLAARVHARMLDA  WRQK+VDWGL IGRL RAD  +     WW RALLP+AD LVLRPLR+QLGLKRARIA TGGAAVAPDIFRLFA+MGVMLRN+YGCSE GL+ VH
Sbjct:    2 AAMAVGAKVVALYPDASEAEVDYIVADAQAVCVFAEDQEQVDKVLPVMARHAGLHTVVWWESGGLWSYRHAGLLGWDAFRTPGDSGQPSDAAWFERSIAQGRAEDIAVLSYTSGTTGAPKGVITTHGSLLHNAHLIGTTMHVPPGSEYLSYIPLSWATEQWVGVALGLMAPLRVNFAERPDQIQEAIRELACEMVFFGPRQWESLAARVHARMLDAAPWRQKVVDWGLRIGRLARADQMDTAARAWWVRALLPVADVLVLRPLREQLGLKRARIAFTGGAAVAPDIFRLFASMGVMLRNIYGCSEFGLVTVH 313          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A0Q7AF21_9BURK (AMP-binding domain-containing protein n=2 Tax=Rhizobacter sp. Root404 TaxID=1736528 RepID=A0A0Q7AF21_9BURK)

HSP 1 Score: 468 bits (1205), Expect = 3.960e-158
Identity = 232/391 (59.34%), Postives = 278/391 (71.10%), Query Frame = 1
Query:    1 MSEHNPQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            MS   P+T+PQWL HNA  R   V  R+K  G+W+EF+W  + D    IA GL A G + G TV+LIGENRPE++WAEWAAMAIGAK V LYPDA+E E+ Y+A D+QAVC+FA+DQEQVDK LPVAA   GL  VVYWE GG+ +Y    L + + +  +   +  A+    +  +A GQ  DIALL YTSGTTG PKGVI TH +L   A+   + L+V  H EYLSY+PLSW TEQW GV +G+M P+RV+FAE PDQ+QEAIRELA D++F GPRQWESLAA VH RM+DA   RQ +V WGL IGR V     E    P W R LLPLA+ LVL PLRDQLGLKR RIAMTGGAA APD+ RLFAAMGV +RN+YGCSE GL+  H
Sbjct:    1 MSSDGPRTVPQWLAHNARERARLVGHRYKCRGIWREFNWAQIHDRTVGIAFGLLALGAKAGDTVMLIGENRPEIFWAEWAAMAIGAKTVTLYPDASEQELRYIATDSQAVCIFADDQEQVDKALPVAAGLDGLAHVVYWEPGGMQAYRDPALRSLEQMIESGAALRLAEPGRVDACIAAGQADDIALLAYTSGTTGNPKGVITTHRALLGCAEQFQKALQVEPHGEYLSYVPLSWITEQWVGVVMGMMLPLRVNFAERPDQVQEAIRELAVDVLFLGPRQWESLAAGVHTRMIDAGPVRQAMVKWGLGIGRAVHVARIEGREPPRWPRLLLPLAEMLVLGPLRDQLGLKRVRIAMTGGAATAPDVVRLFAAMGVRMRNIYGCSEYGLVSAH 391          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: A0A4Q5PM01_9BURK (Long-chain fatty acid--CoA ligase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5PM01_9BURK)

HSP 1 Score: 457 bits (1175), Expect = 1.420e-153
Identity = 225/386 (58.29%), Postives = 274/386 (70.98%), Query Frame = 1
Query:   16 PQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            PQT PQWL +NA  R   V QR+K  GVW++F+W  + ++   IA GL + GV+ G TV+LIGENRPE++WAEWAAMAIGAK V LYPDA+  E+ Y+A D+QAVCVFA+DQEQVDK L VA   + L  ++YWE GGLW+Y    L + + L  A  P+  A     +  +A GQ  DIALL YTSGTTG PKGVI TH ++   A+     L+     EYLSY+PLSW TEQW GV LG+M P+RV+FAE PDQ+QEAIRELA D++F GPRQWESLAA VH RM+DA   RQ LV WGL++GR V     E   +P   R LLPLA+ LVL PLRDQLGLKR ++AMTGGAA APD+ RLFAAMGV +RN+YGCSE GL+  H
Sbjct:    7 PQTAPQWLAYNARERGTLVGQRYKCRGVWQQFTWAKIHEQAERIAFGLLSLGVKPGNTVMLIGENRPEIFWAEWAAMAIGAKTVTLYPDASAQELRYIAEDSQAVCVFADDQEQVDKALGVAEGSAILKDIIYWEPGGLWAYREPSLKSLEQLIEAGAPLRTAQPDRVQASIAAGQADDIALLAYTSGTTGNPKGVITTHRAMLGCAEQFQMALKATPGSEYLSYVPLSWITEQWVGVVLGMMLPLRVNFAERPDQVQEAIRELAVDVLFLGPRQWESLAAGVHTRMIDAGWLRQSLVKWGLSVGRAVHVARMEGREAPVLPRLLLPLAELLVLSPLRDQLGLKRVKLAMTGGAATAPDVVRLFAAMGVRMRNIYGCSEYGLVSAH 392          
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Match: UPI001BE670E6 (AMP-binding protein n=2 Tax=Variovorax paradoxus TaxID=34073 RepID=UPI001BE670E6)

HSP 1 Score: 418 bits (1075), Expect = 2.310e-138
Identity = 206/386 (53.37%), Postives = 267/386 (69.17%), Query Frame = 1
Query:   16 PQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIALGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEIDYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMAGLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKGVIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRPMRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQKLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKRARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH 1173
            PQT+PQWL++N+  R   V  R+K+ G+W+E++W  + ++VR  A GL A+G++RGQTV++IGENRPE+YW EWAAMAIGAK V LYPD++E E+ YVA DA+ V +FAEDQEQVDK L        +  + Y E GGLW Y    L + +AL      +     Q  +Q + +GQ  DIALL YTSGTTG PKGVI TH +L   A+ L + L +  H EYLSYIPLSW  EQW GVTLG+  PMRV+FAE PDQ+ EAIRELA D++  GPRQWE+LA+ V +RM+DA   R+K+V+W L  G+ V     E  TS   AR    +A+  VLR LRDQLGLKR ++A+TGGAA++PD+ RLFA MG+ LRN+Y CSE G++  H
Sbjct:    3 PQTVPQWLLYNSRERAPLVGHRYKQRGIWREYTWRQIYEKVRGAAFGLLAQGIERGQTVMVIGENRPEIYWVEWAAMAIGAKTVTLYPDSSEDELRYVADDAEVVAIFAEDQEQVDKSLTALPHCPLIRAIFYCEPGGLWDYRQPNLRSLEALVEGGLSLARESPQRIDQEIERGQTDDIALLAYTSGTTGSPKGVITTHRALLDCAERLRRALEIQPHSEYLSYIPLSWVPEQWFGVTLGMSLPMRVNFAERPDQVPEAIRELAVDVIVLGPRQWENLASGVFSRMIDAGWLRRKMVEWALAAGKKVNLARIEGGTSTLSARLANVVAEWSVLRGLRDQLGLKRVKVAITGGAAMSPDVVRLFAGMGIALRNIYACSEFGIVSAH 388          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20250.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0T2YQB8_9BURK2.500e-23280.57AMP-binding domain-containing protein n=2 Tax=Hydr... [more]
A0A315BP95_9BURK3.120e-22879.79AMP-binding domain-containing protein n=1 Tax=Limn... [more]
A0A3A4RF86_9BURK3.580e-22879.43Long-chain fatty acid--CoA ligase n=2 Tax=Comamona... [more]
UPI0005ABFE513.020e-22679.34AMP-binding protein n=1 Tax=Variovorax paradoxus T... [more]
A0A4Q5XTV2_9BURK8.080e-22378.17Long-chain fatty acid--CoA ligase n=1 Tax=Comamona... [more]
A0A520GDL1_9BURK2.690e-18268.91Acyl-CoA synthetase n=1 Tax=Variovorax sp. TaxID=1... [more]
A0A4Q5VSI8_9BURK3.640e-16975.64Acyl-CoA synthetase (Fragment) n=1 Tax=Comamonadac... [more]
A0A0Q7AF21_9BURK3.960e-15859.34AMP-binding domain-containing protein n=2 Tax=Rhiz... [more]
A0A4Q5PM01_9BURK1.420e-15358.29Long-chain fatty acid--CoA ligase n=1 Tax=Comamona... [more]
UPI001BE670E62.310e-13853.37AMP-binding protein n=2 Tax=Variovorax paradoxus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20250contigP-wetherbeei_contig20250:64..1236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1123504.JQKD01000004_gene5063
PFAMsAMP-binding
Model size1173
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.82e-124
EggNOG OGsCOG1022@1|root,COG1022@2|Bacteria,1MU4D@1224|Proteobacteria
DescriptionAmp-dependent synthetase and ligase
Cds size1173
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186194.65536-CDS-P-wetherbeei_contig20250:63..12361683186194.65536-CDS-P-wetherbeei_contig20250:63..1236Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20250 64..1236 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20250.2.1prot_P-wetherbeei_contig20250.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20250 64..1236 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20250.2.1

>prot_P-wetherbeei_contig20250.2.1 ID=prot_P-wetherbeei_contig20250.2.1|Name=mRNA_P-wetherbeei_contig20250.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=391bp
MSEHNPQTLPQWLVHNAATRPNEVAQRHKRDGVWKEFSWTAVRDEVRAIA
LGLRARGVQRGQTVLLIGENRPELYWAEWAAMAIGAKAVALYPDATEAEI
DYVAGDAQAVCVFAEDQEQVDKVLPVAARHSGLHTVVYWETGGLWSYTMA
GLMAWDALKTAAHPVGPADAQWFEQVVAQGQGSDIALLTYTSGTTGEPKG
VIATHASLQHNADLLSQTLRVPEHCEYLSYIPLSWATEQWAGVTLGLMRP
MRVSFAEAPDQIQEAIRELACDMVFFGPRQWESLAARVHARMLDAPRWRQ
KLVDWGLNIGRLVRADTPENHTSPWWARALLPLADALVLRPLRDQLGLKR
ARIAMTGGAAVAPDIFRLFAAMGVMLRNVYGCSEVGLMPVH
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mRNA from alignment at P-wetherbeei_contig20250:64..1236+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20250.2.1 ID=mRNA_P-wetherbeei_contig20250.2.1|Name=mRNA_P-wetherbeei_contig20250.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig20250:64..1236+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGAACATAATCCCCAGACCCTGCCGCAATGGCTGGTGCACAACGC GGCCACGCGCCCGAACGAGGTGGCGCAACGGCACAAGCGCGATGGCGTGT GGAAAGAATTCAGCTGGACCGCCGTGCGCGACGAAGTGCGCGCCATCGCA CTGGGTCTGCGCGCCCGCGGCGTGCAGCGCGGCCAGACCGTGCTGCTGAT CGGTGAGAACCGGCCCGAGCTCTATTGGGCCGAATGGGCCGCCATGGCCA TCGGTGCGAAGGCCGTGGCGCTGTACCCCGACGCCACGGAAGCCGAGATC GACTACGTGGCCGGTGACGCACAGGCCGTGTGCGTGTTCGCGGAAGACCA GGAACAGGTCGACAAGGTGTTGCCGGTGGCGGCCAGGCACAGCGGCCTGC ACACCGTCGTCTACTGGGAAACCGGTGGTCTGTGGTCCTACACGATGGCG GGCCTGATGGCCTGGGACGCGCTGAAGACCGCGGCCCATCCGGTCGGGCC GGCGGACGCGCAATGGTTCGAACAGGTGGTGGCGCAGGGCCAGGGCAGCG ACATCGCGCTGCTCACCTACACCTCGGGCACCACCGGCGAGCCCAAGGGC GTGATCGCCACGCACGCCTCGCTGCAGCACAACGCCGATCTGCTCTCGCA GACGCTGCGGGTGCCCGAGCACTGCGAGTACCTGTCGTACATCCCGCTGT CGTGGGCGACCGAACAATGGGCGGGGGTCACGCTCGGCCTCATGCGGCCC ATGCGCGTGAGCTTCGCCGAAGCGCCCGACCAGATCCAGGAAGCGATCCG CGAGCTGGCCTGCGACATGGTCTTCTTCGGCCCGCGCCAATGGGAAAGCC TGGCCGCGCGCGTGCACGCCCGCATGCTCGACGCGCCGCGCTGGCGGCAG AAGCTGGTGGACTGGGGATTGAACATCGGGCGCCTGGTGCGCGCCGACAC GCCCGAGAACCACACCAGCCCCTGGTGGGCACGCGCGCTGCTGCCCCTGG CCGATGCGCTGGTGCTGCGCCCGCTGCGCGACCAGCTCGGCCTCAAGCGC GCGCGCATCGCGATGACCGGTGGCGCGGCCGTGGCGCCCGACATCTTCCG GCTCTTCGCCGCCATGGGCGTGATGCTGCGCAACGTGTATGGCTGCAGCG AGGTCGGCCTGATGCCGGTGCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20250:64..1236+

>mRNA_P-wetherbeei_contig20250.2.1 ID=mRNA_P-wetherbeei_contig20250.2.1|Name=mRNA_P-wetherbeei_contig20250.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig20250:64..1236+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGAACATAATCCCCAGACCCTGCCGCAATGGCTGGTGCACAACGC
GGCCACGCGCCCGAACGAGGTGGCGCAACGGCACAAGCGCGATGGCGTGT
GGAAAGAATTCAGCTGGACCGCCGTGCGCGACGAAGTGCGCGCCATCGCA
CTGGGTCTGCGCGCCCGCGGCGTGCAGCGCGGCCAGACCGTGCTGCTGAT
CGGTGAGAACCGGCCCGAGCTCTATTGGGCCGAATGGGCCGCCATGGCCA
TCGGTGCGAAGGCCGTGGCGCTGTACCCCGACGCCACGGAAGCCGAGATC
GACTACGTGGCCGGTGACGCACAGGCCGTGTGCGTGTTCGCGGAAGACCA
GGAACAGGTCGACAAGGTGTTGCCGGTGGCGGCCAGGCACAGCGGCCTGC
ACACCGTCGTCTACTGGGAAACCGGTGGTCTGTGGTCCTACACGATGGCG
GGCCTGATGGCCTGGGACGCGCTGAAGACCGCGGCCCATCCGGTCGGGCC
GGCGGACGCGCAATGGTTCGAACAGGTGGTGGCGCAGGGCCAGGGCAGCG
ACATCGCGCTGCTCACCTACACCTCGGGCACCACCGGCGAGCCCAAGGGC
GTGATCGCCACGCACGCCTCGCTGCAGCACAACGCCGATCTGCTCTCGCA
GACGCTGCGGGTGCCCGAGCACTGCGAGTACCTGTCGTACATCCCGCTGT
CGTGGGCGACCGAACAATGGGCGGGGGTCACGCTCGGCCTCATGCGGCCC
ATGCGCGTGAGCTTCGCCGAAGCGCCCGACCAGATCCAGGAAGCGATCCG
CGAGCTGGCCTGCGACATGGTCTTCTTCGGCCCGCGCCAATGGGAAAGCC
TGGCCGCGCGCGTGCACGCCCGCATGCTCGACGCGCCGCGCTGGCGGCAG
AAGCTGGTGGACTGGGGATTGAACATCGGGCGCCTGGTGCGCGCCGACAC
GCCCGAGAACCACACCAGCCCCTGGTGGGCACGCGCGCTGCTGCCCCTGG
CCGATGCGCTGGTGCTGCGCCCGCTGCGCGACCAGCTCGGCCTCAAGCGC
GCGCGCATCGCGATGACCGGTGGCGCGGCCGTGGCGCCCGACATCTTCCG
GCTCTTCGCCGCCATGGGCGTGATGCTGCGCAACGTGTATGGCTGCAGCG
AGGTCGGCCTGATGCCGGTGCAC
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