mRNA_P-wetherbeei_contig10057.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10057.3.1
Unique NamemRNA_P-wetherbeei_contig10057.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A1Z8VX09_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TMED62 TaxID=1986642 RepID=A0A1Z8VX09_9PROT)

HSP 1 Score: 74.7 bits (182), Expect = 3.400e-12
Identity = 60/186 (32.26%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   28 TSTLVGDVTTTVLKQDLSGSSAGASSVTLGTGSSGLSVRALSTTGTLSSLDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNVASGKSVTVNDTDAVLSASGL 585
            TS+L G +T T L   ++ S    SS+T+G+ S  L        G L+SLDV    + G+  T  +   T       +    G   ++++  + GNL V+G TTT+N++TIS++D N  +A  +  ++  DGAGLT+ +  GD T     + +T + W  ++  N+ASGK   +N++ ++LSA+ L
Sbjct:  400 TSSLTGTITNTQLAGSIANSKLSNSSITIGSDSIALGGSQTDING-LTSLDVDNVTIDGNTVTTSSGNLT-------IXXXXGTTTIADNAVISGNLTVNGTTTTINSTTISIDDKNFQVATGSADDAAADGAGLTVDSGDGDKT---FNFEATGDNWGASENLNLASGKVYKINNS-SILSATTL 573          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: B5LWD5_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWD5_9PHYC)

HSP 1 Score: 72.8 bits (177), Expect = 1.410e-11
Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 1
Query:  175 LDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNV 525
            LD++LG      T    F+ T+V F  P           +D+T+ GNL V+G    LNT+++ V+D+NI++ N A++++ I G G+++G+S+   T PTLLY+ T   W T+   NV
Sbjct:  364 LDIVLGG-----TEVANFEGTSVSFGTPATFD-------QDVTITGNLNVTGTQVVLNTTSVEVQDINIEMGNAASSHTDIHGGGISLGSSVAGITTPTLLYSETDARWETSVGLNV 468          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A1Z8VWR6_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TMED62 TaxID=1986642 RepID=A0A1Z8VWR6_9PROT)

HSP 1 Score: 72.4 bits (176), Expect = 2.130e-11
Identity = 57/186 (30.65%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   28 TSTLVGDVTTTVLKQDLSGSSAGASSVTLGTGSSGLSVRALSTTGTLSSLDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNVASGKSVTVNDTDAVLSASGL 585
            TS+L G +T T L   ++ S    SS+T+G+ S  L        G L+SLDV    + G+  T  +   T       +    G   ++++  + GNL V+G TTT+N++T++++D N  +A  A  ++  +GAG T+ +  GD T     + +T + W  ++  N+ASGK+  +N+T ++L+A+ L
Sbjct:  400 TSSLTGTITNTQLAGSIANSKLSNSSITIGSDSIALGGSQTDING-LTSLDVDNVTIDGNTVTTSSGNLT-------IXXXXGTTTIADNAVISGNLTVNGTTTTINSTTVAIDDKNFQVATGAADDAAANGAGFTVDSGDGDKT---FNFEATGDNWGASENLNLASGKAYKINNT-SILNATTL 573          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: Q9J3U5_ESV1K (EsV-1-56 n=2 Tax=root TaxID=1 RepID=Q9J3U5_ESV1K)

HSP 1 Score: 64.3 bits (155), Expect = 1.170e-8
Identity = 61/190 (32.11%), Postives = 91/190 (47.89%), Query Frame = 1
Query:   19 VGTTSTLVGDVTTTVLKQDLSGSSA-GASSVTLGTGSSGLSVRALSTTGTLSSLDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNVASGKSVTVNDTDAVLSASGL 585
            V  TS L GD T  V   D+SG+     S +T     +  +  AL+++ T   +D +LG+L+G+PTTA+T  ++A    V                            T+NT+ + VED  IDLA NATT++ +D  G T+G  +     P++LY      W+++ T NV S    TV      LS+SGL
Sbjct:  316 VSGTSLLTGDATV-VGNVDVSGNDLLNVSDITSSNALAEQATIALTSSATDPQIDFVLGDLAGTPTTAMTITESAATVNVXXXXXXXXXXXXXXXXXXXXX-------TVNTTEVRVEDKEIDLAYNATTHAELDQGGFTLGTDVTGIVVPSVLYNLADTRWDSSITMNVPSTNKFTVGGNVTELSSSGL 497          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A6J5T0J3_9CAUD (Uncharacterized protein n=1 Tax=uncultured Caudovirales phage TaxID=2100421 RepID=A0A6J5T0J3_9CAUD)

HSP 1 Score: 62.8 bits (151), Expect = 3.590e-8
Identity = 52/152 (34.21%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  133 LSVRALSTTGTLSSLDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNAT-TNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNVASGKSVTVNDTDAVLSASGL 585
            L +   + T T + ++ + G  +G   TA   K   VD    ++L AG  V + +L + GNL V+G TTT+N++T+SV+D NI L +  T T+   DG G+T+  +    T  T+LY+     W+ ++  N+ +GK+  +N T +VLS S L
Sbjct:   85 LQISGTAITATAAEINKLAGVTAG---TASASKALVVDANKDIDL-AGGSVAAANLVLSGNLTVNGTTTTINSTTMSVDDKNIVLGDVTTPTDVTADGGGITLKGT----TDKTILYSDAISAWSLSENLNIVTGKAFEINGT-SVLSGSAL 227          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A8J6SWM0_9CYAN (Uncharacterized protein n=1 Tax=Trichocoleus sp. FACHB-40 TaxID=2692870 RepID=A0A8J6SWM0_9CYAN)

HSP 1 Score: 59.3 bits (142), Expect = 5.590e-7
Identity = 39/98 (39.80%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  295 DLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNAT-TNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNVASGKSVTVNDTDAVLSASGL 585
            DL + GNLVV+G TTT+N++T++V+D+NI L + A  T++  +G G+T+      AT  T+++ S+   W  ++ +N+ SGKS  +N+ + VL+A+GL
Sbjct:  113 DLIINGNLVVNGTTTTINSATLTVDDINIVLGDVAPPTDATANGGGITLKG----ATDKTIVWDSSNTNWTCSEHWNLLSGKSYKINNVN-VLTATGL 205          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A2E9UI38_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E9UI38_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 1.970e-6
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1
Query:  277 PVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNVAS 531
            PV  S ++ + GNL V G TTT+N++T+S+ D N+ LA++A  ++  + AG+TI    G    PT+LY ST +TW  +K F   S
Sbjct:  310 PVGDSGEVVILGNLKVEGTTTTVNSTTVSINDKNLVLADSAADSAEANDAGITIN---GPPIKPTILYKSTTDTWELSKKFTTPS 391          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A2E8R838_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E8R838_9FLAO)

HSP 1 Score: 57.4 bits (137), Expect = 2.660e-6
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  166 LSSLDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTI-GASIGDATPPTLLYASTAETWNTNKTFNV 525
            LS LDV    L G+  ++ +  +  +D          P   S DL +QGNL V G TTT+N++T+S+ D+N+ LA++A   +  DGAG+TI GAS       TL Y ++ + W  NK  N+
Sbjct:  301 LSRLDVDNIRLDGNTISSTSGAEMFID--------PNPAGDSGDLIIQGNLTVRGTTTTINSATVSINDLNLVLADSAGNAAAADGAGITINGASA------TLTYGASNDRWAFNKGLNL 407          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A1Z8TZ53_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TMED56 TaxID=1986792 RepID=A0A1Z8TZ53_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 3.600e-6
Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 1
Query:  166 LSSLDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDLTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTI-GASIGDATPPTLLYASTAETWNTNKTFNV 525
            LS LDV    L G+  ++ +  +  +D          P   S DL +QGNL V G TTT+N++T+S+ D+N+ LA++A   +  DGAG+T+ GAS       TL Y ++ + W  NK  N+
Sbjct:  303 LSRLDVDNLRLDGNTLSSTSGAEMFID--------PNPAGDSGDLIIQGNLTVRGTTTTINSATVSINDLNLVLADSAGNAAAADGAGITVNGASA------TLTYGASNDRWAFNKGLNL 409          
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Match: A0A382TAR4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382TAR4_9ZZZZ)

HSP 1 Score: 56.6 bits (135), Expect = 3.670e-6
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 1
Query:  193 NLSGSPTTAV----TFKDTAVDFYV-PVNLHAGPVVMSED---LTVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTIGASIGDATPPTLLYASTAETWNTNKTFNVAS--GKSVTVNDTD 561
            NL+G+P  +V    +   T   +   P +    P  + ++   + + GNL V G TTT+N++T++V+D+N+ LA+ A  ++  +GAGLTI     D    TLLY     +W+ NK  NV    G S TV+  D
Sbjct:  133 NLTGTPNLSVGTIGSGNITTTGYLAGPASFTIDPATVGDNTGTVVIAGNLQVDGTTTTINSTTMTVDDLNLVLASGAANSAAANGAGLTI-----DGASATLLYTHATTSWDMNKPLNVTGNIGVSGTVDGVD 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10057.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A1Z8VX09_9PROT3.400e-1232.26Uncharacterized protein (Fragment) n=1 Tax=Alphapr... [more]
B5LWD5_9PHYC1.410e-1135.90Uncharacterized protein n=1 Tax=Feldmannia species... [more]
A0A1Z8VWR6_9PROT2.130e-1130.65Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
Q9J3U5_ESV1K1.170e-832.11EsV-1-56 n=2 Tax=root TaxID=1 RepID=Q9J3U5_ESV1K[more]
A0A6J5T0J3_9CAUD3.590e-834.21Uncharacterized protein n=1 Tax=uncultured Caudovi... [more]
A0A8J6SWM0_9CYAN5.590e-739.80Uncharacterized protein n=1 Tax=Trichocoleus sp. F... [more]
A0A2E9UI38_9BACT1.970e-641.18Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A2E8R838_9FLAO2.660e-637.19Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A1Z8TZ53_9BACT3.600e-636.36Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A382TAR4_9ZZZZ3.670e-633.83Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10057contigP-wetherbeei_contig10057:1444..2184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1137745.H6WFV8_9CAUD
Model size585
Max annot lvl10662|Myoviridae
Hectar predicted targeting categoryother localisation
Exons2
Evalue0.000119
EggNOG OGs4QKHU@10662|Myoviridae
Cds size585
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185852.217755-CDS-P-wetherbeei_contig10057:1443..16171683185852.217755-CDS-P-wetherbeei_contig10057:1443..1617Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10057 1444..1617 +
1683185852.2278948-CDS-P-wetherbeei_contig10057:1773..21841683185852.2278948-CDS-P-wetherbeei_contig10057:1773..2184Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10057 1774..2184 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10057.3.1prot_P-wetherbeei_contig10057.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10057 1444..2184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10057.3.1

>prot_P-wetherbeei_contig10057.3.1 ID=prot_P-wetherbeei_contig10057.3.1|Name=mRNA_P-wetherbeei_contig10057.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=195bp
MDDTLYVGTTSTLVGDVTTTVLKQDLSGSSAGASSVTLGTGSSGLSVRAL
STTGTLSSLDVILGNLSGSPTTAVTFKDTAVDFYVPVNLHAGPVVMSEDL
TVQGNLVVSGVTTTLNTSTISVEDVNIDLANNATTNSMIDGAGLTIGASI
GDATPPTLLYASTAETWNTNKTFNVASGKSVTVNDTDAVLSASGL
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mRNA from alignment at P-wetherbeei_contig10057:1444..2184+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10057.3.1 ID=mRNA_P-wetherbeei_contig10057.3.1|Name=mRNA_P-wetherbeei_contig10057.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig10057:1444..2184+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGACACGCTGTACGTGGGCACTACGAGCACCCTGGTGGGCGATGT CACCACGACCGTCCTCAAGCAGGACCTCAGCGGCAGCAGCGCCGGTGCTT CCTCGGTGACCCTCGGCACCGGATCCAGCGGTCTCTCCGTCCGCGCCCTC TCCACCACAGGAACCCTGAGTTCGGTCAGCCCCCAGTTCCAGGTCAAGCC CACGAGCGTGGAGGTGACCCAGCAGCTCAACATGAACAGCAACCAGGTGA ATGGTGTCACCAACATTCTCAAGGACAGCGCCGGCTCCAAGGGGACCAAG CTTGCTTTCACGAGCGGCACCGTCCCGGAGCTCGACGTGATCCTTGGCAA CCTGTCCGGATCGCCCACCACGGCGGTGACCTTCAAGGACACGGCTGTTG ACTTTTACGTTCCGGTCAACCTTCATGCCGGTCCGGTTGTCATGTCCGAG GACCTCACGGTCCAGGGTAATTTGGTGGTCTCTGGTGTCACAACTACGCT TAACACGAGTACTATTTCGGTGGAAGACGTGAACATTGATCTTGCGAACA ACGCTACAACTAATTCGATGATTGATGGCGCTGGTCTGACGATTGGTGCC AGCATTGGCGATGCCACGCCACCCACTCTGCTCTACGCGTCGACGGCGGA GACATGGAACACCAATAAGACTTTCAATGTGGCGAGCGGCAAAAGTGTCA CGGTCAATGATACCGATGCAGTGCTCTCGGCCAGTGGTCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10057:1444..2184+

>mRNA_P-wetherbeei_contig10057.3.1 ID=mRNA_P-wetherbeei_contig10057.3.1|Name=mRNA_P-wetherbeei_contig10057.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=585bp|location=Sequence derived from alignment at P-wetherbeei_contig10057:1444..2184+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGACACGCTGTACGTGGGCACTACGAGCACCCTGGTGGGCGATGT
CACCACGACCGTCCTCAAGCAGGACCTCAGCGGCAGCAGCGCCGGTGCTT
CCTCGGTGACCCTCGGCACCGGATCCAGCGGTCTCTCCGTCCGCGCCCTC
TCCACCACAGGAACCCTGAGTTCGCTCGACGTGATCCTTGGCAACCTGTC
CGGATCGCCCACCACGGCGGTGACCTTCAAGGACACGGCTGTTGACTTTT
ACGTTCCGGTCAACCTTCATGCCGGTCCGGTTGTCATGTCCGAGGACCTC
ACGGTCCAGGGTAATTTGGTGGTCTCTGGTGTCACAACTACGCTTAACAC
GAGTACTATTTCGGTGGAAGACGTGAACATTGATCTTGCGAACAACGCTA
CAACTAATTCGATGATTGATGGCGCTGGTCTGACGATTGGTGCCAGCATT
GGCGATGCCACGCCACCCACTCTGCTCTACGCGTCGACGGCGGAGACATG
GAACACCAATAAGACTTTCAATGTGGCGAGCGGCAAAAGTGTCACGGTCA
ATGATACCGATGCAGTGCTCTCGGCCAGTGGTCTG
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