mRNA_P-wetherbeei_contig20213.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20213.1.1
Unique NamemRNA_P-wetherbeei_contig20213.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A7Y5GH86_9BACT (Tetratricopeptide repeat protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7Y5GH86_9BACT)

HSP 1 Score: 101 bits (251), Expect = 2.570e-20
Identity = 112/351 (31.91%), Postives = 165/351 (47.01%), Query Frame = 1
Query:   61 ADQRVSVSRDIASLEHRLATHPQEVETMQQLAAALLAEVRIAPRAEMLARAEGLIARLLLVDAPR---ATALHAWHLLIAHRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLD-QHYGVAALARASHLRRLFGDLPGAIEL---AQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALALATDALSDLPAA--ALAVQARAQRALGNADAALALYRVATTRDLRAETLVE-TLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTA-ELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLL 1080
            A ++    + IAS    +A +P+ VE+   LA AL    R         +AE  +A  L ++ PR   A  + AW LL  HRF +AL  A        DD++     ADA  ELG Y +AE   Q +L+     V  L RA+HLR LFGD+ GA+EL   A + ++L+    +RAW+   +A L+L  G    A  LA +AL   P    ALA  A+ + + G  + A+AL R         E L E   +L  AG+++     + A     AR +  S  +  R  + ++   A     A  +AR E  +R DVY+    AW L +  K  EA+R    A+A    +P +
Sbjct:   15 AGEQSPAEQAIASAREAVAKNPKRVESHNALAMALARRARETADTSYYDQAEAALATSLKLE-PRNFEARKIQAWLLLGKHRFADALKLATELNREAADDVMVYGLLADAHVELGNYSQAEEAAQWMLNIGRSSVPGLTRAAHLRELFGDIGGALELMLSAFQRLALNE-NEERAWVLTQMAHLELVNGRKGQASKLAGEALRLFPEYHYALAQLAKIRASEGKPNEAVALLRKRYDTAPHPENLYELAAALKAAGRNKE-ARESFAEFEKAARAEMESWDNANRELIFYYTDHAGNPEEALRVARLEIARRRDVYTLDAYAWALHKNRKAAEARRQMAAALAVGVRDPNI 362          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A838E6R1_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Euzebyales bacterium TaxID=2740540 RepID=A0A838E6R1_9ACTN)

HSP 1 Score: 97.1 bits (240), Expect = 1.680e-18
Identity = 104/278 (37.41%), Postives = 135/278 (48.56%), Query Frame = 1
Query:  283 LIAHRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRA-VSLSTAGRDRAWLQLDLASLQLTAG---AAATALALATDALSDLPAAALAVQARAQRALGNADAALALYRVATTRDLRAETLVETLSLA-LAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAELAS-AASLARAEWLQRPD-VYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQWRCG 1095
            L  H+F +AL   R A  +      AL    DA  ELG YD A   +Q +LD   G+ AL+RAS+LR L GDLPGAI   Q+A ++ S    D A +Q  L  L    G   AAA+AL  A  AL     AA+  +AR   A G+ DAA+        R  R +  +    LA  AG+D+      +AL+  +  L AASG         F    AE    A  LAR  +  RPD V++A  LAW L R G    A RYA RA+   TA+PL+ +   
Sbjct:  145 LSLHQFPDALELGRQAHEAAPFSAEALGVLVDAQVELGDYDAAAADLQRMLDVDPGLPALSRASYLRELNGDLPGAIRAMQQAGIAGSFNSYDVASVQALLGRLHFHNGDLEAAASALDRAEGALPGGVDAAIG-RARLVAARGDVDAAVDELAPVVERTPRPDAAILLAELARAAGRDEQ-AADAEALVRTLLTLQAASGQDVDLELAVFEADRAERPDEAVRLARDAYDARPDNVFAADALAWSLHRGGDSAGAVRYAERAVRLDTADPLIHFHAA 420          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: UPI0019AE3135 (Tetratricopeptide repeat protein n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI0019AE3135)

HSP 1 Score: 96.7 bits (239), Expect = 1.840e-18
Identity = 106/350 (30.29%), Postives = 159/350 (45.43%), Query Frame = 1
Query:   73 VSVSRDIASLEHRLATHPQEVETMQQLAAALLAEVRIAPRAEMLARAEGLIARLLLVDAPRATALHAWHLLI--AHRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRA-WLQLDLASLQLTAGAAATALALATDALSDLPAA--ALAVQARAQRALGNADAALALYRVATTRDLRAETLVETLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAELAS----AASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQWRCG 1095
            VS  R I +L+ RL  +P +V     L  ALL  VR      +  +AE  +   L  D     AL     L    H+F  AL     AR +      A     DALTELGRYDEA      ++     +A+  R ++ R L GD  G +E    A+S   +  +   W ++ L +L    GA   A    T AL+  P    A A  A+   A G+  AA+A Y     R    E ++    L  A  +QA   +  +L+  M +L+A +G       +E  L  A+  S    A ++A+A + + P++++A  LAW L+R GK  EA RY+T A+   T +  +++R G
Sbjct:   48 VSSERSINTLKARLRENPADVAAASTLGLALLQRVRETGDVGLYGQAEQALQTALTHDPKNPDALIGMGALANARHQFTAALDWGEQARAASPYRAAAYGVITDALTELGRYDEAAAAADQMVQTRPDLASYTRVAYQRELRGDTAGTVEAFDLAISAGGSITEHTVWTRVQLGNLHFNNGALDLAAETYTQALAISPQDDYAQAGLAKVAAARGDRVAAIASYEQIVARLPLPEFVIALGELYQAEGEQAKAEQQYSLVRAMQQLNAGAGMDVD---LELALFEADHGSDPQQALAMAQAAYGRHPNIHAADALAWALYRAGKPAEATRYSTEALQLGTRDAAMRFRAG 394          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A7V3BVZ6_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V3BVZ6_9ACTN)

HSP 1 Score: 94.7 bits (234), Expect = 8.820e-18
Identity = 109/344 (31.69%), Postives = 152/344 (44.19%), Query Frame = 1
Query:   91 IASLEHRLATHPQEVETMQQLAAALLAEVRIAPRAEMLARAEGLIAR-LLLVDAPRATALHAWHLL--IAHRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALA-----LATDALSDLPAAALAVQARAQRALGNADAALALYRVATTRDLRAETLVETLSL-ALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQWRCG 1095
            IA L+ RL   P++  ++  L  A + + RI        +AE  + R L LV    A AL     L    H F +AL   R A  +   D  A     DAL ELGRY +A    Q ++D    +A+ AR S+ R L GD+ GAIE  + A+S +    D AW    L  L+   G   +A +     L  DA + +P   LA  AR   A G+ D AL  YR    R    E +     L A  G+D  L     A++     +  A+G +       F     +  SA + A AEW +R  V+ A   AW L+  G+ DEA R + RA+A  T   L  +  G
Sbjct:   60 IAGLQARLRDRPEDAGSLAALGLAYVQQARITADPSYYPKAEEALERSLALVPDGNADALVGLGALDLARHAFADALTWGRRAVAADPYDANARGVVGDALLELGRYRQAFRAFQAMVDTRPDIASYARVSYARELRGDVNGAIEAMELALSAAGTPADAAWASYQLGELEFGRGDVRSAASRYERGLELDA-TYVPN--LAGLARVTWARGDVDRALERYRDVVERYPSVEHVAALGDLYATLGRD-GLAAEQYAVVEATRAIARANGVNVDLEVALFDADHGDPVSALAAAEAEWARRKGVHVADAYAWALYANGRYDEAARISRRALALGTRNALFLFHAG 399          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: UPI000566FA4E (tetratricopeptide repeat protein n=1 Tax=Kitasatospora azatica TaxID=58347 RepID=UPI000566FA4E)

HSP 1 Score: 86.7 bits (213), Expect = 5.150e-15
Identity = 113/350 (32.29%), Postives = 153/350 (43.71%), Query Frame = 1
Query:   88 DIASLEHRLATHPQEVETMQQLAAALLAEVRIAPRAEMLARAEGLIARLLLVDAP-RATALHAWHLLIA--HRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALALATDALSDLPAAA--LAVQARAQRALGNADAALALYRVATTRD------LRAETLVETLSLALAGKDQALVLRTQALLAGMARLDAASG---GSDRRSFVEFHLLTAELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQWRCG 1095
            DIA L+ RL   PQ+   +  L    + + RI        +AE ++ + L +DA    TA+     L A  H F  AL  A+ A     D+       ADA T+LGRY ++   VQ ++D   G  +LARAS+   L GD+  A E   RA++ +    DRA+    LA L L  G   TALA A   L   P +A  L  +ARA+ ALGNADAALA Y  A  +       L    L+++L      + Q  V R      G  +L   +G    SD+  F   H    + A A SL       RP V      AW L   G   EA   + +A A      L  +  G
Sbjct:   70 DIAGLQERLREAPQDAPALGTLGLDYVQQARITVDPSYYPKAEAVLTQSLKLDAADNFTAMAGMAALEAARHNFASALDWAQRAIAVNPDNATLSGILADAYTQLGRYADSFDAVQHMVDLRPGTPSLARASYAWELRGDVNAATENMTRALNDANTPADRAFTLYHLAQLALENGDPKTALAHAEAGLRAAPGSAELLEGRARAEAALGNADAALADYTSAVAKVPQPSYVLELGELLQSLGRTREAEQQYQVFR------GEEKLFTDNGVALDSDQTLFEADH---GDPAKALSLGENGLRTRPFVEMHDAYAWALHVNGHDTEALEQSRQATALGMRNALFHYHQG 410          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A7V8Z2Z5_9ACTN (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8Z2Z5_9ACTN)

HSP 1 Score: 84.0 bits (206), Expect = 2.350e-14
Identity = 85/265 (32.08%), Postives = 128/265 (48.30%), Query Frame = 1
Query:  286 IAHRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALALATDALSDLPAAALAVQARAQRA--LGNADAALALYRVATTRD--LRAETLVETLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAE----LASAASLARAEWLQRPD-VYSAAQLAWVLWREGKRDEAQRYATRAI 1053
            + H+FDEA   A  A  +    +  L++ ADA  ELG Y EA   VQ +LD   GV AL+RAS+LR+L+GD+PGA+ L  +A + +      A +   L  +   AG  A ALA    A +  P  +LA+  RA+    LG  D A+ +    T R   L    L+  L  A    D+A        + G+ + +A +        V+  L  +     L +A + A A +  RPD +Y+A  +AW L R G+  EA  +  +A+
Sbjct:  102 VLHQFDEAHDLATRALDTDPTSIEGLAALADAQVELGHYQEAADTVQAMLDLDPGVPALSRASYLRQLYGDMPGALRLMHQARAAAGTPYLAAAVDSLLGEVYTAAGQPAEALAAYEQAENAWPGMSLAITGRARSLAMLGRTDEAIEILMAETERATALGPVILLADLLAAQGRGDEAADAYELVEVIGLLQEEAGA-------IVDLELAISRAGRGLDTAVASAEAVFAARPDNIYAADAMAWALHRTGRTAEAVAHIEQAL 359          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A3N6EXK0_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Streptomyces sp. ADI96-02 TaxID=1522760 RepID=A0A3N6EXK0_9ACTN)

HSP 1 Score: 84.3 bits (207), Expect = 3.040e-14
Identity = 103/341 (30.21%), Postives = 148/341 (43.40%), Query Frame = 1
Query:   91 IASLEHRLATHPQEVETMQQLAAALLAEVRIAPRAEMLARAEGLIARLLLV----DAPRATALHAWHLLIAHRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALALATDALSDLP--AAALAVQARAQRALGNADAALALYRVATTRDLRAETLVETLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQWRCG 1095
            + SL  R+   P + E    L  A + + R         RAE  + R L V    +AP AT + A      HRF  AL  AR A  +      A    ADALT+LGRY+E+   VQ + D     AALARAS+   L GD   A+EL  R++  +    + A+ +  L++L L +G A  AL  A   L+ +P  AA L  +ARA+  LG    A+A +  A       + L+    L L+  D A       +L     L  + G +     + F     + A+A  + R    +RP +     L W L R G+  EA   A  A+   TA     +  G
Sbjct:   69 VESLRARVRRLPSDAEGWAALGMAYVQQARSTADPATYGRAEAALRRSLDVQPSGNAPAATGMGALEAA-RHRFGHALTWARRAVEANPYSAPAHGVLADALTQLGRYEESFEAVQRMCDLKPDSAALARASYSWELRGDTGRAVELMTRSLGAAGTPAETAFARTHLSTLALESGRAQAALRHAEAGLAAVPGDAALLEARARARTVLGQTPGAVADFTAALAVAPLPQYLLGLGDLRLSVGDTAGAEAQYDVLRAQETLRRSGGEAADADAILFEADHGDPATAVRMGRTAVRERPFLAVHDALGWALHRAGRDREALEQADSALRLGTASAPFHYHRG 408          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A8J6I474_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Longispora sp. TaxID=1929489 RepID=A0A8J6I474_9ACTN)

HSP 1 Score: 83.2 bits (204), Expect = 6.910e-14
Identity = 100/343 (29.15%), Postives = 143/343 (41.69%), Query Frame = 1
Query:   82 SRDIASLEHRLATHPQEVETMQQLAAALLAEVRIAPRAEMLARAEGLIARLLLVDAPRATALHAWHLLIA---HRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALALATDALSDLP--AAALAVQARAQRALGNADAALALYRVATTRDLRAETLVETLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQWRCG 1095
            S  IA  E R+   P +  T+  L  A +   R         RA+  + + L V +      H     +A   H F  AL  A  A  +      A    ADAL ELGRYDE    VQ ++D     ++ ARAS+   L GD  GA    +RA+  + +    ++    L  L   AG    A +    +L+  P    + A +AR   A G    ALA YR  TTR      L E   L  A  D +       L+    RL AA G +       F     +  +A + A+A + +RP++++A  LAW L   G+  EA  YA +A    T   LL++  G
Sbjct:   49 SAAIARAERRVRELPGDWVTLADLGLAYVERARATGDPSYYTRAQAALEKSLAVRSSENAGAHLGLGALAAARHDFTGALTHADDAIATDAYMAAAHGVRADALIELGRYDEGSAAVQRMIDLRPDASSYARASYALELRGDTDGARHALERALQSAPSVAATSFALYQLGELAFHAGDLDAASSRYEQSLARNPEDVGSRAGRARVLAARGQTKKALAEYRTLTTRLPNPAYLAEYGDLLAASGDMSGAKAQYDLVRVTQRLLAAQGMNTDLELALFDADHEQPTTALTAAQAAYAKRPNIFAADALAWALHANGRSVEALPYARQAQRLETRNALLRYHLG 391          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A6G2YJW5_9ACTN (Tetratricopeptide repeat protein n=4 Tax=Streptomyces TaxID=1883 RepID=A0A6G2YJW5_9ACTN)

HSP 1 Score: 82.8 bits (203), Expect = 9.680e-14
Identity = 90/273 (32.97%), Postives = 125/273 (45.79%), Query Frame = 1
Query:  292 HRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALALATDALSDLPA--AALAVQARAQRALGNADAALALYRVATTRD------LRAETLVETLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQW 1086
            HRF EAL  AR A  S      A    ADALT+LGRY+E+   VQ + D      ALARAS+   L GD   A +L +++   +    D+A+    LA+L L +G  +TA+ LA   L+ LP   A L  +ARA  ALG    A++ Y  A          L    L E+L      ++Q  VLR Q       +L  A+GG      V F     +  +A ++ R    QRP +     +AW L R G+  EA   A  A+   T     ++
Sbjct:  132 HRFAEALTWARRATTSDPYSAPAQGVLADALTQLGRYEESYAAVQRMTDLRPDSGALARASYSWELRGDTKRARDLMEKSYQAAGTPSDKAFALTHLATLALESGNPSTAVGLANTGLAALPGDPALLEARARAHTALGQNRQAVSDYTTAIAAAPLPQYLLGLGDLQESLGHPEKAEEQYNVLRAQD------KLRKANGGVADVDGVLFEADHGDPDTAVTMGRTALRQRPFLAVHDAMAWALHRAGRDSEAIEQADLALELGTVSAPFRY 398          
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Match: A0A537ZIE5_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZIE5_9ACTN)

HSP 1 Score: 82.0 bits (201), Expect = 1.790e-13
Identity = 103/350 (29.43%), Postives = 143/350 (40.86%), Query Frame = 1
Query:   76 SVSRDIASLEHRLATHPQEVETMQQLAAALLAEVRIAPRAEMLARAEGLIARLLLVDAP---RATALHAWHLLIAHRFDEALVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAALARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGAAATALA-------LATDALSDLPAAALAVQARAQRALGNADAALALYRVATTRDLRAETLVETLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLLTAELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAYHTAEPLLQWRCG 1095
            S+++ IASL+ RL T P +   +  L  A + + R+        +AEG++ R L + A     A        L  H F  AL     AR     +        DA  ELGRY EA G  QT++D    +A+ AR S+ R L GD+ GA+   + A   +   +D AW    L  L    G  A A A       LA D +   P A L   A+   A G A  A+  Y     R    E ++    +        L  R  AL+    RL  A+G +       F         A + ARAEW +R  +  A  L W L+  G+  EA  YA  A+A  T   L  +  G
Sbjct:   63 SLAQAIASLQERLRTAPGDWRGLADLGLAYVQQARVTADPSFYPKAEGVLERSLQLQAGGNFEAMVGMGALGLARHDFSGALRWGERARALNPYNGNVYGVIGDAQVELGRYREAFGTFQTMVDTRPDLASYARVSYARELQGDVGGALAAMRTAEKAAGTPQDAAWASYQLGELYFAGGRPARAEAAYRRGVELAPDYVP--PHAGL---AKVDWANGRAGRAIREYGWVVARFPSPEYVIALGDVYAKSGRSRLAERQYALVRVEERLFRANGVNVDLELALFDADHGRPTDALAAARAEWGRRHSINVADALGWALYANGRYREAAPYARAALALGTRNALFMFHAG 407          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20213.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y5GH86_9BACT2.570e-2031.91Tetratricopeptide repeat protein n=1 Tax=Bryobacte... [more]
A0A838E6R1_9ACTN1.680e-1837.41Tetratricopeptide repeat protein n=1 Tax=Euzebyale... [more]
UPI0019AE31351.840e-1830.29Tetratricopeptide repeat protein n=1 Tax=Roseiflex... [more]
A0A7V3BVZ6_9ACTN8.820e-1831.69Tetratricopeptide repeat protein n=1 Tax=Actinomyc... [more]
UPI000566FA4E5.150e-1532.29tetratricopeptide repeat protein n=1 Tax=Kitasatos... [more]
A0A7V8Z2Z5_9ACTN2.350e-1432.08Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A3N6EXK0_9ACTN3.040e-1430.21Tetratricopeptide repeat protein n=1 Tax=Streptomy... [more]
A0A8J6I474_9ACTN6.910e-1429.15Tetratricopeptide repeat protein n=1 Tax=Longispor... [more]
A0A6G2YJW5_9ACTN9.680e-1432.97Tetratricopeptide repeat protein n=4 Tax=Streptomy... [more]
A0A537ZIE5_9ACTN1.790e-1329.43Tetratricopeptide repeat protein n=1 Tax=Actinomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20213contigP-wetherbeei_contig20213:144..1238 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1449346.JQMO01000003_gene6881
PFAMsTPR_16,TPR_19,TPR_8
Model size1095
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue8.14e-16
EggNOG OGsCOG0457@1|root,COG0457@2|Bacteria,2GJD3@201174|Actinobacteria
DescriptionTetratricopeptide repeat
Cds size1086
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186193.6448922-UTR-P-wetherbeei_contig20213:143..1521683186193.6448922-UTR-P-wetherbeei_contig20213:143..152Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20213 144..152 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186193.655668-CDS-P-wetherbeei_contig20213:152..12381683186193.655668-CDS-P-wetherbeei_contig20213:152..1238Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20213 153..1238 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20213.1.1prot_P-wetherbeei_contig20213.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20213 153..1238 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20213.1.1

>prot_P-wetherbeei_contig20213.1.1 ID=prot_P-wetherbeei_contig20213.1.1|Name=mRNA_P-wetherbeei_contig20213.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp
MLRWLAIVLVVSTPLVMADQRVSVSRDIASLEHRLATHPQEVETMQQLAA
ALLAEVRIAPRAEMLARAEGLIARLLLVDAPRATALHAWHLLIAHRFDEA
LVAARHARHSGGDDLLALSSEADALTELGRYDEAEGVVQTLLDQHYGVAA
LARASHLRRLFGDLPGAIELAQRAVSLSTAGRDRAWLQLDLASLQLTAGA
AATALALATDALSDLPAAALAVQARAQRALGNADAALALYRVATTRDLRA
ETLVETLSLALAGKDQALVLRTQALLAGMARLDAASGGSDRRSFVEFHLL
TAELASAASLARAEWLQRPDVYSAAQLAWVLWREGKRDEAQRYATRAIAY
HTAEPLLQWRCG
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mRNA from alignment at P-wetherbeei_contig20213:144..1238+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20213.1.1 ID=mRNA_P-wetherbeei_contig20213.1.1|Name=mRNA_P-wetherbeei_contig20213.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1095bp|location=Sequence derived from alignment at P-wetherbeei_contig20213:144..1238+ (Phaeothamnion wetherbeei SAG_119_79)
CTGAACGTAATGTTGCGCTGGCTCGCGATAGTGCTGGTAGTGAGCACGCC ACTCGTGATGGCCGATCAACGTGTGTCCGTGAGCCGCGACATCGCGAGCC TGGAACACAGGCTGGCCACACATCCACAGGAAGTGGAGACCATGCAGCAG CTCGCCGCCGCGCTGCTGGCTGAAGTGCGCATTGCGCCGCGCGCCGAGAT GTTGGCGCGCGCAGAAGGTCTCATAGCGCGCCTGCTGCTTGTGGATGCCC CGCGTGCCACTGCGCTCCATGCCTGGCACCTGTTGATAGCGCATCGCTTT GACGAGGCATTGGTGGCCGCGCGGCATGCCCGTCACAGCGGCGGTGACGA CTTGCTGGCGCTGAGCAGCGAAGCCGATGCCTTGACCGAGCTCGGGCGTT ATGACGAAGCGGAAGGGGTGGTACAGACACTGCTCGACCAGCACTATGGT GTCGCGGCGCTGGCGCGTGCCTCGCATCTTCGTCGGCTGTTCGGCGATCT GCCGGGCGCCATTGAGCTAGCGCAAAGAGCCGTGAGCCTCAGCACTGCCG GCCGCGATCGCGCCTGGTTACAACTCGATCTCGCGAGCTTGCAGTTGACA GCCGGTGCAGCGGCTACGGCCCTGGCGCTGGCAACAGACGCGCTTTCGGA CTTGCCTGCAGCGGCGCTCGCGGTGCAGGCCCGCGCGCAGCGTGCTCTCG GTAATGCCGACGCCGCGCTGGCGCTCTATCGAGTGGCGACAACACGTGAC TTGCGCGCCGAAACCCTGGTCGAAACCTTGTCACTGGCACTCGCCGGCAA AGACCAGGCGCTGGTGCTGCGCACCCAAGCCTTGCTCGCTGGCATGGCGC GACTCGATGCCGCCAGTGGCGGTAGCGACCGACGTAGCTTCGTCGAATTT CATCTGTTGACCGCTGAGCTCGCGAGTGCCGCAAGCCTGGCGCGTGCCGA ATGGCTGCAACGCCCCGATGTCTACAGTGCCGCGCAACTCGCCTGGGTAT TGTGGCGCGAGGGTAAGCGCGACGAAGCGCAGCGCTACGCGACGCGCGCG ATTGCCTACCACACTGCCGAGCCCTTACTTCAATGGCGCTGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20213:144..1238+

>mRNA_P-wetherbeei_contig20213.1.1 ID=mRNA_P-wetherbeei_contig20213.1.1|Name=mRNA_P-wetherbeei_contig20213.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig20213:144..1238+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTGCGCTGGCTCGCGATAGTGCTGGTAGTGAGCACGCCACTCGTGAT
GGCCGATCAACGTGTGTCCGTGAGCCGCGACATCGCGAGCCTGGAACACA
GGCTGGCCACACATCCACAGGAAGTGGAGACCATGCAGCAGCTCGCCGCC
GCGCTGCTGGCTGAAGTGCGCATTGCGCCGCGCGCCGAGATGTTGGCGCG
CGCAGAAGGTCTCATAGCGCGCCTGCTGCTTGTGGATGCCCCGCGTGCCA
CTGCGCTCCATGCCTGGCACCTGTTGATAGCGCATCGCTTTGACGAGGCA
TTGGTGGCCGCGCGGCATGCCCGTCACAGCGGCGGTGACGACTTGCTGGC
GCTGAGCAGCGAAGCCGATGCCTTGACCGAGCTCGGGCGTTATGACGAAG
CGGAAGGGGTGGTACAGACACTGCTCGACCAGCACTATGGTGTCGCGGCG
CTGGCGCGTGCCTCGCATCTTCGTCGGCTGTTCGGCGATCTGCCGGGCGC
CATTGAGCTAGCGCAAAGAGCCGTGAGCCTCAGCACTGCCGGCCGCGATC
GCGCCTGGTTACAACTCGATCTCGCGAGCTTGCAGTTGACAGCCGGTGCA
GCGGCTACGGCCCTGGCGCTGGCAACAGACGCGCTTTCGGACTTGCCTGC
AGCGGCGCTCGCGGTGCAGGCCCGCGCGCAGCGTGCTCTCGGTAATGCCG
ACGCCGCGCTGGCGCTCTATCGAGTGGCGACAACACGTGACTTGCGCGCC
GAAACCCTGGTCGAAACCTTGTCACTGGCACTCGCCGGCAAAGACCAGGC
GCTGGTGCTGCGCACCCAAGCCTTGCTCGCTGGCATGGCGCGACTCGATG
CCGCCAGTGGCGGTAGCGACCGACGTAGCTTCGTCGAATTTCATCTGTTG
ACCGCTGAGCTCGCGAGTGCCGCAAGCCTGGCGCGTGCCGAATGGCTGCA
ACGCCCCGATGTCTACAGTGCCGCGCAACTCGCCTGGGTATTGTGGCGCG
AGGGTAAGCGCGACGAAGCGCAGCGCTACGCGACGCGCGCGATTGCCTAC
CACACTGCCGAGCCCTTACTTCAATGGCGCTGCGGC
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