mRNA_P-wetherbeei_contig20195.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A523P034_9PROT (Methylhydantoinase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P034_9PROT) HSP 1 Score: 386 bits (992), Expect = 5.050e-129 Identity = 187/246 (76.02%), Postives = 224/246 (91.06%), Query Frame = 1
Query: 31 VIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
+++Q++VDP+TFEVLRSIFEYASERMSTVL+RASFSPILADMVDFSNAIYD + +LLSQAANCP+HLAAMKFSAEAII+Q+ L + GDV ++NDPY+GGTHINDMTFL+PIFFD +++AF VSRGHW+DLGGGAAGGQAF GTHIAGEGLRLPP+K+YE G+VR+D+LAI++ NTRTP +V+GD QAHVG L+A QEM+RAAEKYG+ATL AAMKQLQ+YTERIVR SIA++PDG Y AE+YA
Sbjct: 1 MVEQSQVDPITFEVLRSIFEYASERMSTVLQRASFSPILADMVDFSNAIYDADAQLLSQAANCPVHLAAMKFSAEAIIKQFGLDNIHEGDVIMVNDPYQGGTHINDMTFLTPIFFDSELLAFAVSRGHWLDLGGGAAGGQAFRGTHIAGEGLRLPPIKIYERGEVRDDILAILLCNTRTPHFVRGDLQAHVGCLRAGEQEMQRAAEKYGVATLTAAMKQLQKYTERIVRNSIAEIPDGTYTAEDYA 246
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A1Z9UJJ1_9GAMM (Methylhydantoinase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UJJ1_9GAMM) HSP 1 Score: 382 bits (982), Expect = 2.320e-127 Identity = 191/256 (74.61%), Postives = 220/256 (85.94%), Query Frame = 1
Query: 1 MDKKVKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
MD VK + V D +KVDPVTFEVLRSIFEYA++RMS+VL+RASFSPILADM+DFSNAIYD + +LLSQAANCPIHLAAMKFSAEAII++YP++ M+P DVYV+NDPYKGGTH ND+TF+ PIFF+G II FGVSRGHWMDLGGGAAGGQA GTHIAGEGLRLPPLK++ G+V +D+L II+NNTRTP +VKGD QAHVG LKAA E+ AAE+YG+ L AMKQLQEYTE IVRK I D+PDGEY AEEYA
Sbjct: 1 MDTLVKSNNLVEDGSKVDPVTFEVLRSIFEYAADRMSSVLQRASFSPILADMIDFSNAIYDADAQLLSQAANCPIHLAAMKFSAEAIIDKYPVNQMKPEDVYVVNDPYKGGTHXNDITFMMPIFFNGXIIGFGVSRGHWMDLGGGAAGGQAMDGTHIAGEGLRLPPLKIFSQGEVNQDILDIILNNTRTPHFVKGDLQAHVGCLKAADTELRAAAERYGIDVLTVAMKQLQEYTENIVRKGILDIPDGEYFAEEYA 256
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A2W5KM59_STANO (Methylhydantoinase n=1 Tax=Starkeya novella TaxID=921 RepID=A0A2W5KM59_STANO) HSP 1 Score: 353 bits (907), Expect = 4.360e-116 Identity = 174/254 (68.50%), Postives = 217/254 (85.43%), Query Frame = 1
Query: 7 KKVKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
K+ VD +V++ VDPVTFEVLR+ F+YA RM+T+++R SFSPILAD++DFSNAIYD E +LL+QAANCP+HLAAMK+SA+A I +YP+ T++PGDV LNDPY+GGTHIND+TF+ PIF+D II F VSRGHWMDLGGGAAGGQ+F GTHIAGEGLRLPPLKLY+ K+ EDLLAIIMNNTRTPF++KGD QAH+GALK+A E++RAA +YG ++AAM+QL YTERIVRKSI ++PDG+Y AE++A
Sbjct: 7 KQPGVDPSVLEDG-VDPVTFEVLRNTFDYACNRMATIMQRTSFSPILADVLDFSNAIYDAEVRLLAQAANCPVHLAAMKYSADAAIAKYPIDTLKPGDVIALNDPYQGGTHINDITFVMPIFYDEKIIGFAVSRGHWMDLGGGAAGGQSF-GTHIAGEGLRLPPLKLYQNYKINEDLLAIIMNNTRTPFFIKGDLQAHLGALKSAESELQRAAARYGAPVVQAAMRQLIGYTERIVRKSIEEIPDGDYTAEDFA 258
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: UPI001C955962 (hydantoinase B/oxoprolinase family protein n=2 Tax=Geminicoccus TaxID=489140 RepID=UPI001C955962) HSP 1 Score: 342 bits (877), Expect = 1.100e-111 Identity = 167/252 (66.27%), Postives = 210/252 (83.33%), Query Frame = 1
Query: 13 VKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
VKVD+ K+DP+TFEVLR+ F+YA +RMST+++R SFSPILAD++D+SNAIYD + +LLSQAANCP+HLAAM+FSA+A ++P+ T++PGDV LNDPY+GGTHIND+TF PIF +G+I+ F VSRGHWMDLGGGAAGGQ+F GTH+A EGLRLPP+KLYE ++ D LAIIMNNTRTP +VKGD QAH+GALK+A E++RAA +YG T+KAAM L YTERIVRKSI D+PDG+Y AE++A
Sbjct: 6 VKVDS------KIDPITFEVLRNTFQYACDRMSTIMQRTSFSPILADILDYSNAIYDPQLRLLSQAANCPVHLAAMQFSADASTARFPIDTLKPGDVIALNDPYQGGTHINDITFTMPIFHEGEILGFAVSRGHWMDLGGGAAGGQSF-GTHVAAEGLRLPPIKLYENYEINRDFLAIIMNNTRTPHFVKGDLQAHLGALKSAETELQRAATRYGTETIKAAMSDLIGYTERIVRKSIEDIPDGDYTAEDFA 250
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A0W1G0Z0_9SPHN (Methylhydantoinase n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A0W1G0Z0_9SPHN) HSP 1 Score: 338 bits (867), Expect = 2.380e-111 Identity = 159/241 (65.98%), Postives = 205/241 (85.06%), Query Frame = 1
Query: 46 KVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
++DP+TFEVLRS+F+Y +RM+T L+R+SFSPIL+DM+DFSNAIYD +LL+QAANCP+HLAAMKFSAEA + +YP+ T+ PGDV V+NDPY+GGTHIND++F+ PI+F D+I F VSRGHWMDLGGGAAGGQAF GTHIA EGLRLPPLK+Y K+ +DLL II+NNTRTP +V+GD QAH G L++A QE++RA +YG+ T AM+Q+Q+YTER+VR +I+++PDGEYE E+YA
Sbjct: 9 QIDPITFEVLRSVFDYTCDRMATTLQRSSFSPILSDMLDFSNAIYDRNLQLLAQAANCPVHLAAMKFSAEAAVRKYPVETLSPGDVLVVNDPYQGGTHINDISFIMPIYFGKDLIGFAVSRGHWMDLGGGAAGGQAF-GTHIAAEGLRLPPLKIYSEYKINQDLLDIILNNTRTPHFVQGDLQAHFGCLRSAEQELQRACARYGVETTVKAMEQVQKYTERMVRAAISNIPDGEYEGEDYA 248
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A386UTQ5_9RHOB (N-methylhydantoinase n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A386UTQ5_9RHOB) HSP 1 Score: 340 bits (873), Expect = 4.050e-111 Identity = 163/240 (67.92%), Postives = 207/240 (86.25%), Query Frame = 1
Query: 49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
+DP+TFEV+RSIFE+AS+RM+TV++R+SFSPILADM+DFSNAIYD + LLSQAANCP+HLAAMKFSAE ++ + ++ GDV VLNDPY+GGTHIND+TF PI+F ++I + VSRGHWMDLGGG AGGQAF+ THIA EGLRLPPLK++ GK+ EDL+AII+NNTRTP ++KGDTQAH+GAL AA QEM+RA E+YG+ T++AAMK++Q YTE++VR+SI +PDG YEAE+YA
Sbjct: 9 IDPITFEVMRSIFEFASDRMATVMQRSSFSPILADMLDFSNAIYDADLHLLSQAANCPVHLAAMKFSAEEAVKGIGAANIREGDVLVLNDPYRGGTHINDITFTKPIYFKKELIGYAVSRGHWMDLGGGGAGGQAFS-THIAAEGLRLPPLKIFSGGKLNEDLMAIILNNTRTPHFIKGDTQAHLGALLAAEQEMQRACERYGVDTVRAAMKKIQAYTEKMVRESIRSIPDGVYEAEDYA 247
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A132BRL8_9RHOB (Acetophenone carboxylase delta subunit n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A132BRL8_9RHOB) HSP 1 Score: 340 bits (873), Expect = 4.530e-111 Identity = 158/240 (65.83%), Postives = 207/240 (86.25%), Query Frame = 1
Query: 49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
VD VTFEVLR+ FEYA RMST+++R SFSPILAD++DFSNA+YD E +LL+QAANCP+HLAAM++SA+A +YP+ TM+PGD+Y LNDPY+GGTHIND+TF+ P+F++ +++ F VSRGHWMDLGGGAAGG +F+ TH+A EGLR+PP+KLYE ++ D LAIIMNNTRTPF+++GD QAH+GAL+AA QE++RAA +YG+ T+KAAMK+L YTERI+RKSI ++PDG Y AE++A
Sbjct: 12 VDAVTFEVLRNTFEYACNRMSTIMQRTSFSPILADILDFSNAVYDPELRLLAQAANCPVHLAAMQYSADAAARKYPIETMKPGDIYALNDPYQGGTHINDITFIMPVFYEEEVLGFAVSRGHWMDLGGGAAGGMSFS-THVAAEGLRIPPIKLYENYEINPDFLAIIMNNTRTPFFIEGDLQAHLGALRAAEQELQRAARRYGLQTVKAAMKELIGYTERIIRKSIEEIPDGVYYAEDFA 250
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: UPI001BA47F49 (hydantoinase B/oxoprolinase family protein n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BA47F49) HSP 1 Score: 340 bits (871), Expect = 1.040e-110 Identity = 165/249 (66.27%), Postives = 211/249 (84.74%), Query Frame = 1
Query: 25 TAVIDQT-KVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
TA +D + ++DPVTFEVLR+ FEYA RM+T+++R SFSPILAD++DFSNAIYD + +LL+QAANCP+HLAAM++SA+A I ++P+ T++PGDV LNDPY+GGTHIND+TF PIFF G++I F VSRGHWMDLGGGAAGG +F+ THIA EGLRLPP+KLY+ ++ ED LAIIMNNTRTP Y++GD QAH+GALK+A E++RAAE+YG+ T+KAAM +L YTERIVRKSI +PDG Y AE++A
Sbjct: 7 TAKLDVSDRIDPVTFEVLRNTFEYACSRMTTIMQRTSFSPILADILDFSNAIYDSKVRLLAQAANCPVHLAAMQYSADAAIARFPIETLKPGDVIALNDPYQGGTHINDITFTMPIFFKGELIGFAVSRGHWMDLGGGAAGGMSFS-THIAAEGLRLPPIKLYQNYEINEDYLAIIMNNTRTPHYIRGDLQAHLGALKSAEAELQRAAERYGVETVKAAMNELIGYTERIVRKSIEAIPDGVYSAEDFA 254
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A1V0GN80_9RHOB (Methylhydantoinase n=3 Tax=Paracoccus yeei TaxID=147645 RepID=A0A1V0GN80_9RHOB) HSP 1 Score: 339 bits (869), Expect = 1.620e-110 Identity = 164/240 (68.33%), Postives = 205/240 (85.42%), Query Frame = 1
Query: 49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
+DP+TFEV+RSIFE+AS+RM+TVL+R+SFSPILADM+DFSNAIYD + +LLSQAANCP+HLAAMKFSAE + + GDV VLNDPY+GGTHIND+TF PIF+ G +I +GVSRGHWMDLGGG AGGQAF+ THIA EGLRLPPLK+Y GK+ EDLLAII+NN+RTP ++KGD QAH+GAL AA QEM+RA ++YG+ T++AAMK++Q YTE++VR+SI +P+G YEAE+YA
Sbjct: 9 IDPITFEVMRSIFEFASDRMATVLQRSSFSPILADMLDFSNAIYDADLQLLSQAANCPVHLAAMKFSAEEAVRGVGPQNVHEGDVLVLNDPYRGGTHINDITFTKPIFYKGALIGYGVSRGHWMDLGGGGAGGQAFS-THIAAEGLRLPPLKIYSGGKLNEDLLAIILNNSRTPHFIKGDVQAHLGALLAAEQEMQRACDRYGVDTVRAAMKKIQAYTEKMVRESIRTIPNGIYEAEDYA 247
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A7H9C004_PARPN (Hydantoinase B/oxoprolinase family protein n=7 Tax=Proteobacteria TaxID=1224 RepID=A0A7H9C004_PARPN) HSP 1 Score: 338 bits (867), Expect = 3.230e-110 Identity = 163/240 (67.92%), Postives = 205/240 (85.42%), Query Frame = 1
Query: 49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
+DP+TFEV+RSIFE+AS+RM+TVL+R+SFSPILADM+DFSNAIYD + +LLSQAANCP+HLAAMKFSAE ++ + GDV VLNDPY+GGTHIND+TF PIF+ G +I +GVSRGHWMDLGGG AGGQAF+ THIA EGLRLPPLK+Y GK+ EDLLAII+NN+RTP ++KGD QAH+GAL AA QE++RA ++YG+ T++AAMK++Q YTE++VR SI +P+G YEAE+YA
Sbjct: 9 IDPITFEVMRSIFEFASDRMATVLQRSSFSPILADMLDFSNAIYDADLQLLSQAANCPVHLAAMKFSAEEAVKGVGPQNVHEGDVLVLNDPYRGGTHINDITFTKPIFYKGQLIGYGVSRGHWMDLGGGGAGGQAFS-THIAAEGLRLPPLKIYSGGKLNEDLLAIILNNSRTPHFIKGDVQAHLGALLAAEQELQRACDRYGVDTVRAAMKKIQAYTEKMVRGSIRTIPNGVYEAEDYA 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20195.1.1 >prot_P-wetherbeei_contig20195.1.1 ID=prot_P-wetherbeei_contig20195.1.1|Name=mRNA_P-wetherbeei_contig20195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp MDKKVKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILAback to top mRNA from alignment at P-wetherbeei_contig20195:472..1239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20195.1.1 ID=mRNA_P-wetherbeei_contig20195.1.1|Name=mRNA_P-wetherbeei_contig20195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig20195:472..1239+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20195:472..1239+ >mRNA_P-wetherbeei_contig20195.1.1 ID=mRNA_P-wetherbeei_contig20195.1.1|Name=mRNA_P-wetherbeei_contig20195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig20195:472..1239+ (Phaeothamnion wetherbeei SAG_119_79)back to top |