mRNA_P-wetherbeei_contig2015.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2015.1.1
Unique NamemRNA_P-wetherbeei_contig2015.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A2J8A8J2_9CHLO (Alpha-1,3-mannosyltransferase CMT1 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A8J2_9CHLO)

HSP 1 Score: 177 bits (448), Expect = 5.120e-47
Identity = 112/303 (36.96%), Postives = 160/303 (52.81%), Query Frame = 1
Query:   13 CPFRLSRPAAQ-----ALRKRSYFIAALQRDVGEIFGAWQRELFKVVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDLRALNRGRIVMVPTARTAYDWDVF 906
            C FR  R AA      AL+ +S F+A    +  +I   +  EL KV+  L +A    VFVS+YES S+D++  EL+   +LL+ LGV H+V+       +   +   RI +LA +RN++L+PL  S + +D VL+ ND+ +CA   +DL  ++  GG        ADM+C+ DF      +  Q E+  YD W   D+ G  FRN  PY    E+  R           F A  P  VF+CW GM AV    F    +RFR  +  EC  SECEL+ RD+ A++  +IV++PTA  AY  DVF
Sbjct:   30 CGFREVRAAASQGSWLALKGKSVFVAVTFHNNQDILPTFFFELLKVILTLREAFEGTVFVSVYESGSTDLSAFELIQLQLLLERLGVEHEVV----TRGITRSEQEHRIRFLAKVRNLSLKPLLVSNRTFDTVLFFNDVYFCAQSALDLL-LLREGG--------ADMACSADF-----NRNDQGELAYYDIWASRDLHGRKFRNAPPYIGLPESWQR-----------FQARAPVPVFACWGGMAAVTATTFTTHGLRFRRNYDTECAASECELLCRDMWAVDLNKIVLLPTAIAAYTHDVF 303          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A835SLS8_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SLS8_CHLIN)

HSP 1 Score: 171 bits (432), Expect = 3.830e-44
Identity = 103/280 (36.79%), Postives = 148/280 (52.86%), Query Frame = 1
Query:   67 FIAALQRDVGEIFGAWQRELFKVVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDLRALNRGRIVMVPTARTAYDWDVF 906
            FIA    +  EI   +  EL ++V  L +A   +VFVS+YES S+D++  EL+   +LL+   +PH+V+     T +P      RI +LA +RN++++PL    ++YD VL++ND+ +CA   +D+  +   G         ADM C+ DF     G     E+  YD WV  D+ G  FRN  PY   +E+  R           F A  P  V+SCW GM AV G  F    +RFR     EC  SECEL+ RDL      +I+++PTA TAY +DVF
Sbjct:   64 FIAVTFHNNQEILPTFFFELLRLVLTLREAFGGDVFVSVYESGSTDLSAFELIQFRLLLERARIPHEVVT-RGITRMPTEH---RIDFLAKVRNLSIKPLLTGRREYDTVLFINDVYFCAQSALDVLLMRAAG---------ADMVCSADFYRNEKG-----ELAYYDIWVSRDLHGRKFRNSPPYIGLEESWQR-----------FQARSPVPVYSCWGGMAAVAGSAFGAHGIRFRRNFPTECAASECELLCRDLWGAGLSKIILLPTATTAYAYDVF 314          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A835XFG2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XFG2_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 1.270e-41
Identity = 106/286 (37.06%), Postives = 150/286 (52.45%), Query Frame = 1
Query:   49 LRKRSYFIAALQRDVGEIFGAWQRELFKVVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDLRALNRGRIVMVPTARTAYDWDVF 906
            LR +  FIA    +   +   +  EL ++V  L +A  + V+VS+YES S+D++  EL+   +LL  LGV H+ L+    T  P      RI +LA +RN++L+ L      YD VL+ ND+ +C    +D+  + T  G+   GG  ADM C+ DF     G     E+  YD WV  D+ G  FRN  PY   +E+  R           F+A  P  VFSCW GM AV   +F +  +RFR     EC  SECEL+ RD+  +N   IV++PTA  AY +DVF
Sbjct:    7 LRDKRIFIAVTFHNNQALLPTFFFELLRLVLTLREAFGAKVYVSVYESGSTDLSAFELIQCRLLLARLGVEHE-LVTRGLTRAPLDH---RIDFLARVRNLSLKRLLVDGGGYDTVLFFNDVFFCVESALDVLLLRT--GTTEKGG--ADMVCSADFNRNDNG-----ELAFYDIWVSRDLHGRKFRNLPPYIALEESWQR-----------FEARVPVPVFSCWGGMAAVAASVFTEHNIRFRRNQPTECAASECELLCRDMWGVNMSSIVLLPTAIAAYSYDVF 268          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A836BN70_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BN70_9CHLO)

HSP 1 Score: 162 bits (410), Expect = 2.180e-41
Identity = 99/263 (37.64%), Postives = 142/263 (53.99%), Query Frame = 1
Query:  121 ELFKVVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMS-RIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDLRALNRGRIVMVPTARTAYDWDVF 906
            EL KVV  L DA  + VFVS+YES S+D++  EL+    +L+ LGV ++V+     T    RD    RIA+LA +RN++++ L    ++YD VL+ NDI +CA   +D+  +   G         ADM C+ DF     GQ     +  YD W   D+ G  FRND+PY    ++  +           F +  P  VF+CW GM AV    F + R+RFR  +  EC  SECE++ RD+ A+N  +I ++PTA  AY  DVF
Sbjct:    3 ELLKVVVTLRDAFGATVFVSVYESGSTDLSAFELIQLRAVLEKLGVENEVV-----TRGVTRDPQEHRIAFLARVRNLSIKQLLVGREEYDTVLFFNDIYFCAQSALDVLLLRAAG---------ADMVCSADFNRNEKGQ-----LAFYDIWATRDLHGRKFRNDQPYVGLPDSWHK-----------FQSRLPVPVFACWGGMAAVTAAAFTEHRLRFRRNYPTECAASECEVLCRDMWAVNLTKIFLLPTAIAAYSHDVF 235          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A8J6CDD2_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDD2_DIALT)

HSP 1 Score: 152 bits (383), Expect = 1.420e-37
Identity = 106/309 (34.30%), Postives = 149/309 (48.22%), Query Frame = 1
Query:   43 QALRKRSYFIAALQRDVGEIFGAWQRELFKVVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLF-----ESPKDYDVVLYLNDILYCATDVVDLARVVTP-----------GGSAAGG----------GIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDLRALNRGRIVMVPTARTAY 891
            + LR+  YF+AAL     ++ G W REL K+V  LG+  + NVFVS+ ES+S D+T   L+    LL  +GV  ++   H          + RIA+LA LRN AL+PL           Y  VL+LND+ +CA  V++L   V             G S AG              ADM+C+VD+   T G      + +YD W  HD++G    N  P+     ++            AF   +PF V  CWNG+VA   D   +  +RFR     EC  SEC+L  RDL ++  GRI++VP  + AY
Sbjct:  180 RGLRRGRYFVAALLHQNAKVEGWWGRELVKLVLSLGNERMDNVFVSVLESNSGDLTSAMLLPLFELLGAIGVRARLWTAHTGP-----RPVGRIAFLAQLRNEALRPLLLEASTPGSAPYSHVLFLNDVYFCARGVLELLHHVRAEPSGGESDAREGASEAGDEGERRAPRAWAYAADMACSVDY---TSG------LSLYDKWAAHDLLGHALLNAPPHVRHAPSRD-----------AFARAEPFPVLGCWNGLVAFRADALVERGLRFRRNVPLECAASECDLFCRDLWSVGLGRILLVPRVKVAY 463          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A8H3CCS6_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3CCS6_9AGAM)

HSP 1 Score: 129 bits (325), Expect = 1.070e-30
Identity = 101/315 (32.06%), Postives = 146/315 (46.35%), Query Frame = 1
Query:   13 CPFRLSRPAAQALRKRSYFIAALQRDVGEIFGAWQRELFKVVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRN----------DRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHR-------YECELSECELIGRDLRALNRGRIVMVPTARTAYDWDVF 906
            CP R     A +L ++  FIA       E+     REL  ++ +LG      VFVS+YE+ S D+T + L     +LD LG P++V+     T +  +++  RI+ LA +RN AL+PL + P ++D VL+LND+ +C TDV++L       G        A  +C +D+  R           IYD WV+  M G  F N          D  Y  + E              A +   PF+VFSCWNG+ A     F  A +RFR A            + SEC L   DL     GR+++VP  R AY  D++
Sbjct:  128 CPTRADPHYASSLYQKRVFIAINLLQNEELMPTLTRELVALIRVLGP---DRVFVSIYENASMDLTVMHLRLLCQILDALGTPYRVI-AQGLTELQQKENGHRISRLAAVRNAALEPLSD-PSEFDTVLWLNDVFHCHTDVLELLLQKQQQG--------AVQACGLDYGPRG---------LIYDRWVMRTMRGTPFYNQSDLVDFFSSDITYKARPEVLPSPQDALDK--AALERGDPFQVFSCWNGVTAFSASAF--ASLRFRTALNDPDSKDGVTDKASECYLSSVDLWKHGLGRVMIVPRVRVAYSLDIY 416          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A7S0Z7C4_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z7C4_9CHLO)

HSP 1 Score: 130 bits (328), Expect = 2.630e-30
Identity = 84/261 (32.18%), Postives = 137/261 (52.49%), Query Frame = 1
Query:  133 VVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDLRALNRG---RIVMVPTARTAYDWDVF 906
            +VY + D   S+ F+S+YES S+D T+  L   D  L  L + H+++LG     +P++    RIA+LA +RN+A+ P +E+P D+D +++LND++ CA+ V++L                AD+   +D++     Q  +     YDTWV  D+ G +FRN  PY    +   R           +  +QPF+VF+ W G V +  +L +K  +RFR +   EC   ECEL+ RDL  L+     ++++VP+    Y    F
Sbjct:  123 LVYNITDEHSSSCFISIYESGSADGTRQLLRAFDEDLHALSISHRLILGGRER-LPEQH---RIAFLADMRNMAMGPFYENPGDWDEIIFLNDVVTCASGVLELVHQKQYQN--------ADVVSGMDYV-----QHAKYGTLFYDTWVNKDIKGQSFRNGAPYIEDADTWSR-----------YVDMQPFQVFTTWAGGVVISANLLRKFTIRFRHSSTLECASCECELLIRDLWHLSGSQGLKVLVVPSVFVTYSLAEF 355          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A835XUT1_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XUT1_9CHLO)

HSP 1 Score: 129 bits (325), Expect = 3.290e-30
Identity = 83/224 (37.05%), Postives = 117/224 (52.23%), Query Frame = 1
Query:  238 LLDTLGVPHKVLLGHEATYVPDRDSMS-RIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDLRALNRGRIVMVPTARTAYDWDVF 906
            +L+ LGV H+V+     T    RD    RIA+LA +RN++++ L    ++YD VL+LND+ +     +DL  + T       GG  ADM C+ DF        +  E+  YD WV  D+ G  F N RP   QD    +           ++A  P  V SCW GM AV   +F +  +RFR     EC  SECEL+ RD+ A+N+  I+++PTA TAY  DVF
Sbjct:    4 VLEKLGVRHEVV-----TRGVTRDPQEHRIAFLARVRNLSIKQLLVGREEYDTVLFLNDVYFSVESALDLLLLRT---GKVEGGRGADMVCSADFYM------EGGELLFYDKWVARDLHGRKFGN-RPPFIQDAGSWQ----------RYEARHPLAVTSCWGGMAAVAASVFTEHNIRFRRNFPTECAASECELLCRDMWAVNKSAIILLPTAVTAYAHDVF 202          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A7S0WK29_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WK29_9CHLO)

HSP 1 Score: 130 bits (327), Expect = 3.640e-30
Identity = 83/246 (33.74%), Postives = 131/246 (53.25%), Query Frame = 1
Query:  163 SNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQKARVRFRAAHRYECELSECELIGRDL---RALNRGRIVMVPTARTAY 891
            +N F+S+YES S+D T+L L   ++ L  LG+P+K ++        D D   RIA+LA +RN  L P +E    +D V++LNDI+ CA+ +++L  +V           DA++   +D++        +  V  YDTWV  D++G +F N +P+   + +  R           F + +PF+VF+ W G V +   LFQ  RVRFR +   EC   ECEL+ RDL      N  ++++VP+   AY
Sbjct:  173 NNCFISVYESGSTDSTRLLLKSIEVHLSRLGIPYKFVVD---ALQRDLDE-HRIAFLATIRNEVLAPFYEDVSAWDEVIFLNDIITCASSILEL--IVQKAHH------DAEVVSGMDYVVNA-----KRGVLFYDTWVNKDILGQSFNNQQPFVKDEHSWER-----------FKSRKPFQVFTTWAGGVVITASLFQNPRVRFRHSGLLECASCECELLIRDLWHYSGTNGLKVMVVPSVYVAY 390          
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Match: A0A8H3GS75_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3GS75_9AGAM)

HSP 1 Score: 126 bits (317), Expect = 1.580e-29
Identity = 104/329 (31.61%), Postives = 150/329 (45.59%), Query Frame = 1
Query:    1 AHLPCPFRLSRPAAQALRKRSYFIAALQRDVGEIFGAWQRELFKVVYLLGDATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVPDRDSMSRIAYLALLRNVALQPLFE-SPKDYDVVLYLNDILYCATDVVDLARVVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGMNFRN---------------DRPYA---CQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGDLFQK-ARVRFRAAHR-------YECELSECELIGRDLRALNRGRIVMVPTARTAYDWDVF 906
            A+  CP R     + AL  +  FIA       E+     REL  ++ +LG      VFVS+YE+ S D+T + L     +LD LG P+KV+     T +  ++   RI+ L+ LRN A++PL E +P ++D VL+LND+ +C TDV++L       G        A  +CA+DF  +           IYD WV+  M G  F N                RP+     +D+              A +   PF+VFSCWNG+ A    +F     +RFR A            + SEC L   DL     G+I++VP  R AY  DV+
Sbjct:  128 AYPSCPTRSDEQYSSALYTKRTFIAINLLQNEELMPTLTRELIALIRVLGP---DRVFVSVYENASMDLTVMHLRLLCKVLDALGTPYKVV-AKGLTELQQKEHGHRISRLSALRNAAMEPLQELNPLEFDNVLWLNDVFHCHTDVLELLLQKQKQG--------AVQACALDFGPKG---------LIYDRWVLRTMRGQPFYNYSDLVDFFSSDITNKPRPWVLPLAEDDNDKS----------ALEKGNPFQVFSCWNGVTAFSASVFAPPVSLRFRTALNDANSTDGVTDKASECYLSSVDLWKAGMGKIMVVPRVRVAYSLDVY 425          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2015.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2J8A8J2_9CHLO5.120e-4736.96Alpha-1,3-mannosyltransferase CMT1 n=1 Tax=Tetraba... [more]
A0A835SLS8_CHLIN3.830e-4436.79Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A835XFG2_9CHLO1.270e-4137.06Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A836BN70_9CHLO2.180e-4137.64Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A8J6CDD2_DIALT1.420e-3734.30Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A8H3CCS6_9AGAM1.070e-3032.06Hypothetical protein n=1 Tax=Rhizoctonia solani Ta... [more]
A0A7S0Z7C4_9CHLO2.630e-3032.18Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A835XUT1_9CHLO3.290e-3037.05Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A7S0WK29_9CHLO3.640e-3033.74Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A8H3GS75_9AGAM1.580e-2931.61Hypothetical protein n=1 Tax=Rhizoctonia solani Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2015contigP-wetherbeei_contig2015:2489..3987 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog242159.ABP00608
PFAMsCAP59_mtransfer
Model size906
Max annot lvl3041|Chlorophyta
KEGG koko:K13690
Hectar predicted targeting categorymitochondrion
Exons2
Evalue3.36e-29
EggNOG OGs28JAD@1|root,2QRP7@2759|Eukaryota,3808P@33090|Viridiplantae,34M4W@3041|Chlorophyta
DescriptionCryptococcal mannosyltransferase 1
Cds size906
COG categoryS
CAZyGT69
BRITEko00000,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186192.4364398-CDS-P-wetherbeei_contig2015:2488..31661683186192.4364398-CDS-P-wetherbeei_contig2015:2488..3166Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2015 2489..3166 +
1683186192.4521081-CDS-P-wetherbeei_contig2015:3759..39871683186192.4521081-CDS-P-wetherbeei_contig2015:3759..3987Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2015 3760..3987 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2015.1.1prot_P-wetherbeei_contig2015.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2015 2489..3987 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2015.1.1

>prot_P-wetherbeei_contig2015.1.1 ID=prot_P-wetherbeei_contig2015.1.1|Name=mRNA_P-wetherbeei_contig2015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
AHLPCPFRLSRPAAQALRKRSYFIAALQRDVGEIFGAWQRELFKVVYLLG
DATLSNVFVSLYESHSSDVTQLELVGADMLLDTLGVPHKVLLGHEATYVP
DRDSMSRIAYLALLRNVALQPLFESPKDYDVVLYLNDILYCATDVVDLAR
VVTPGGSAAGGGIDADMSCAVDFLARTPGQEQQDEVRIYDTWVVHDMMGM
NFRNDRPYACQDEAQVRCGFLFSSFLVAFDALQPFEVFSCWNGMVAVDGD
LFQKARVRFRAAHRYECELSECELIGRDLRALNRGRIVMVPTARTAYDWD
VF
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mRNA from alignment at P-wetherbeei_contig2015:2489..3987+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2015.1.1 ID=mRNA_P-wetherbeei_contig2015.1.1|Name=mRNA_P-wetherbeei_contig2015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1499bp|location=Sequence derived from alignment at P-wetherbeei_contig2015:2489..3987+ (Phaeothamnion wetherbeei SAG_119_79)
GCACACCTGCCATGCCCATTTCGCCTGTCCCGTCCTGCCGCACAGGCGCT GCGGAAACGGAGCTACTTCATTGCGGCGCTGCAGCGCGACGTCGGCGAAA TATTCGGCGCCTGGCAGCGCGAGCTCTTCAAGGTCGTCTACCTGCTGGGT GACGCCACGCTCAGCAACGTCTTCGTGTCGCTCTACGAGTCGCACAGCTC CGATGTGACCCAGCTGGAGCTGGTCGGGGCCGACATGCTCTTGGACACAC TCGGCGTGCCGCACAAGGTGCTGCTCGGCCACGAGGCCACCTATGTACCA GACCGTGACTCCATGAGCCGCATCGCCTACTTGGCGCTGCTCCGCAACGT GGCGCTGCAGCCGCTCTTCGAGTCACCGAAGGACTACGACGTCGTCCTCT ACCTCAACGACATTCTCTACTGCGCCACCGACGTCGTCGACCTGGCGCGC GTCGTCACGCCCGGCGGCTCGGCGGCGGGGGGCGGTATCGACGCGGACAT GTCGTGCGCGGTGGATTTTCTGGCGCGAACCCCCGGGCAGGAGCAGCAAG ACGAGGTGCGTATCTACGACACGTGGGTGGTGCACGACATGATGGGCATG AACTTCCGCAACGACCGACCCTACGCCTGCCAGGACGAGGCGCAGGTGCG TTGTGGCTTTCTTTTCTCTAGTTTTCTTGTCGAGAGGGCTTTTGGTTTGT TCGAGCTGGCGGCTCTCTTTCCCTTTTGAGATTCGTTTCAGGGATTTACG CGTTTAAGGAGAGGTTCAGGGTTTGGTTTGGAGTAATGGCTTTCAATTTG AGCGTCCATCCAGTTTGAGCCATCGTTCTCCTGGGCGGGATGGGCGGGGA GAACTTTCTTTCCTCTTGTCCAAGAAATCAAAAAAATTGTGATTTCAAAA CTCGACCAAAGAAAGGGTAGATGGGGAGGGAATTTTCTTTCGCAAAGCAA AGCGGTTTGGTGGCTTCCAGCCGTCATTGCGAGCGGTGGCCGTGTGGGCC TTAAGATGATTCTTGCTTTCTTTCTGCGGCAAGAACGCCGGACTTCTTGC TGCCCTCCTTCTCTTTTTTCTCTTTCCGTCGGGAAAAAAACATAGCGCAA CTCCACCCACTTCTTACCGCTCCACTTTCTTGCTCCACCTTGCCACCCTC GTTCCACCTCGCTCTCCTCCCTCCCTTTCCCGTTATCCTCGCTTCTCTTC CCTTTTCCACTCCTTTCAACCCGCTTCAACACGCCTGCCCCATCGCGGCC CCGCCCTTTCACTGTGGATAGGTGGCCTTCGACGCGCTGCAGCCGTTCGA GGTCTTTTCGTGCTGGAACGGCATGGTGGCGGTGGATGGCGACTTGTTCC AGAAGGCGCGCGTCCGCTTCCGGGCGGCACACCGCTACGAGTGCGAGCTT TCCGAATGCGAGCTCATCGGCCGCGACCTGCGCGCGCTAAACCGCGGTAG AATCGTAATGGTGCCGACGGCGCGGACGGCGTACGACTGGGACGTGTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2015:2489..3987+

>mRNA_P-wetherbeei_contig2015.1.1 ID=mRNA_P-wetherbeei_contig2015.1.1|Name=mRNA_P-wetherbeei_contig2015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig2015:2489..3987+ (Phaeothamnion wetherbeei SAG_119_79)
GCACACCTGCCATGCCCATTTCGCCTGTCCCGTCCTGCCGCACAGGCGCT
GCGGAAACGGAGCTACTTCATTGCGGCGCTGCAGCGCGACGTCGGCGAAA
TATTCGGCGCCTGGCAGCGCGAGCTCTTCAAGGTCGTCTACCTGCTGGGT
GACGCCACGCTCAGCAACGTCTTCGTGTCGCTCTACGAGTCGCACAGCTC
CGATGTGACCCAGCTGGAGCTGGTCGGGGCCGACATGCTCTTGGACACAC
TCGGCGTGCCGCACAAGGTGCTGCTCGGCCACGAGGCCACCTATGTACCA
GACCGTGACTCCATGAGCCGCATCGCCTACTTGGCGCTGCTCCGCAACGT
GGCGCTGCAGCCGCTCTTCGAGTCACCGAAGGACTACGACGTCGTCCTCT
ACCTCAACGACATTCTCTACTGCGCCACCGACGTCGTCGACCTGGCGCGC
GTCGTCACGCCCGGCGGCTCGGCGGCGGGGGGCGGTATCGACGCGGACAT
GTCGTGCGCGGTGGATTTTCTGGCGCGAACCCCCGGGCAGGAGCAGCAAG
ACGAGGTGCGTATCTACGACACGTGGGTGGTGCACGACATGATGGGCATG
AACTTCCGCAACGACCGACCCTACGCCTGCCAGGACGAGGCGCAGGTGCG
TTGTGGCTTTCTTTTCTCTAGTTTTCTTGTGGCCTTCGACGCGCTGCAGC
CGTTCGAGGTCTTTTCGTGCTGGAACGGCATGGTGGCGGTGGATGGCGAC
TTGTTCCAGAAGGCGCGCGTCCGCTTCCGGGCGGCACACCGCTACGAGTG
CGAGCTTTCCGAATGCGAGCTCATCGGCCGCGACCTGCGCGCGCTAAACC
GCGGTAGAATCGTAATGGTGCCGACGGCGCGGACGGCGTACGACTGGGAC
GTGTTC
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