mRNA_P-wetherbeei_contig20149.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A1E4G075_9BACT (Uncharacterized protein (Fragment) n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4G075_9BACT) HSP 1 Score: 107 bits (267), Expect = 1.700e-27 Identity = 52/99 (52.53%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 133 GIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIATQ 429
GIPV+LP A +++SE + IVLT+ DG Y+LNKD V+ +L+ A+ L PGGLEA R+ +I LN DLS+QHRYV+ A+D+LRK+G+N+++IAT+
Sbjct: 6 GIPVNLPAAETSESESNHQPIVLTVKPDGRYFLNKDVVKLDELAGAIEAL----PGGLEAARKTNIVLNADLSSQHRYVMAALDELRKLGLNDFLIATE 100
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A1Q3MQP4_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium 55-13 TaxID=1895717 RepID=A0A1Q3MQP4_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 8.870e-23 Identity = 57/138 (41.30%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 16 FTQTKKKRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQD-SITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIAT 426
F + ++ + KIEIIPM+D MF LLVF++LSSLAL G+PV+LP A++A +Q + ++ +TI KD +LNK+ V L+ L A GG +A + S+ +N DL+ H VV +D+ R VG++++ IAT
Sbjct: 3 FKRRRELKKTKIEIIPMIDTMFFLLVFFMLSSLALTKMMGLPVNLPKASTAP-KQNATDLTVTIDKDQKVFLNKNEVSLTDLAPQLLAKA----GGPDAKLDEVSVVINADLAVPHGLVVKCIDEARSVGVSHFAIAT 135
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A356R318_9BACT (Biopolymer transporter ExbD n=2 Tax=Nitrospirales TaxID=189778 RepID=A0A356R318_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 1.970e-22 Identity = 55/141 (39.01%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 7 LQLFTQTKKKRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIATQ 429
++L TKKK +IEIIPM+D MF LLVF+++++L++ HG+PV+LP A+SA +++ ++I LT+T +G + NK+R++ P+L L L Q+ P S+ +N D H V+ MD +R G+ N IAT+
Sbjct: 11 MRLPAATKKKA--RIEIIPMIDTMFFLLVFFMIATLSMTIQHGMPVNLPTADSA-TDKVPDQISLTLTHEGTLFYNKERIDFPELEIRLKSLRQTDP-------DPSLVINADEEVPHGQVIKVMDIIRLAGIPNMAIATK 141
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: UPI0019ACCDB3 (Biopolymer transporter ExbD n=1 Tax=Gloeobacterales cyanobacterium ES-bin-313 TaxID=2812629 RepID=UPI0019ACCDB3) HSP 1 Score: 93.2 bits (230), Expect = 1.900e-21 Identity = 43/129 (33.33%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 46 KIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIATQA 432
+I ++P++DV+F +L F++L+S+ L G+P+DLP A +A+S+Q S+++ L++ K+G Y+LNK+ VE + A+ + P L + + D ++RYV+ +D+LRKV + +AT +
Sbjct: 18 EINVVPLIDVLFAILTFFVLASIFLTRQQGLPLDLPKATTAESKQMSQQVTLSVNKEGKYFLNKNYVELKDIGAAVKAQLDADPARL-------VVVAGDKKVEYRYVISLLDELRKVNATKFALATDS 139
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A402D559_9BACT (Outer membrane transport energization protein ExbD (TC 2. C.1. 1. 1) n=1 Tax=Capsulimonas corticalis TaxID=2219043 RepID=A0A402D559_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 4.000e-21 Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 16 FTQTKKKRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIATQAAA 438
F + ++ + KIEIIPM+D +F LLVF++LSSLAL G+PV+LP A +A ++Q++ ++ +TI K Y+NK V L AL A G S+ +N DL+ H VV ++D+ RKVG++ + IAT A
Sbjct: 3 FKRRRELKRTKIEIIPMIDTIFFLLVFFMLSSLALTRLDGLPVNLPKAATA-TKQQANDLTVTIDKSKQIYVNKTPVTMATLGAALLAAA----GPQADLNTASVVINADLTVPHGLVVGSIDEARKVGISRFSIATDPEA 138
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A524IKH7_9BACT (Biopolymer transporter ExbD n=1 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A524IKH7_9BACT) HSP 1 Score: 91.3 bits (225), Expect = 9.630e-21 Identity = 50/137 (36.50%), Postives = 82/137 (59.85%), Query Frame = 1
Query: 34 KRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIATQAAAPS 444
K+ P+IEIIPM+D MF LLVF+++++L++ HG+PV LP A S+ ++ E + LT+T++G Y NK+ + L + L L Q+ + + S+ +N D H V+ MD +R G+ + IATQ ++ S
Sbjct: 8 KKKPRIEIIPMIDTMFFLLVFFMIATLSMTIQHGMPVSLPTAESS-TDSLDEHVSLTLTREGTLYYNKEAITLQVLEKRLANLRQT-------SSKPSLLINADEQIPHGQVIKVMDLIRLSGITSMSIATQPSSDS 136
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A0U1KWL4_9FIRM (Biopolymer transport protein ExbD/TolR n=1 Tax=Sporomusa ovata TaxID=2378 RepID=A0A0U1KWL4_9FIRM) HSP 1 Score: 90.9 bits (224), Expect = 1.550e-20 Identity = 51/132 (38.64%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 28 KKKRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIA 423
K + +IEIIPM+D MF LLVF++L+SL + + +PV+LP A Q +Q+ + I LT+TKDGN + +K+++ P L ++ QS+ + +Q S+ +N D S +H VV M+ +R+ G+N IA
Sbjct: 6 KPLKKARIEIIPMIDTMFFLLVFFMLASLTMTNQFSLPVNLPHAAGIQDKQQ-QVITLTLTKDGNIFYDKEQIATPA-DAVLRLVHQSK-----SDKQTSVIINADRSVEHGRVVELMEAIRQSGLNRIAIA 130
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A1F9HML3_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_02_44_9 TaxID=1797873 RepID=A0A1F9HML3_9DELT) HSP 1 Score: 90.1 bits (222), Expect = 2.940e-20 Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 28 KKKRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIATQAAAPSP 447
K+ + +IEIIPM+D MF LLVF+++++L++ G+PV+LP A +++S+ K ++I +T++KDG Y NK ++ +L L A PG L + ++ D H VV MD+++ G+N IAT+ P
Sbjct: 8 KQPKKARIEIIPMIDTMFFLLVFFMIATLSMSVMRGMPVNLPKAEASKSDLK-DDISVTLSKDGYVYFNKQEIKRAELPTLLLAEASKNPGIL-------VMISADEEVSHGNVVELMDEIKTAGINRLAIATKKKDKKP 139
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A402BLQ2_9FIRM (Biopolymer transport protein ExbD n=1 Tax=Sporomusaceae bacterium TaxID=1917525 RepID=A0A402BLQ2_9FIRM) HSP 1 Score: 89.0 bits (219), Expect = 7.090e-20 Identity = 53/139 (38.13%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 7 LQLFTQTKKKRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIA 423
+++ T KK +IEIIPM+D MF LLVF+++++L++ S +PV+LP AN AQ++ K + LT+TKD + +K+ V P+ EA LAQ +Q S+ +N D S +H VV MD +R++G+ + +A
Sbjct: 1 MKISRNTPKK--VRIEIIPMIDTMFFLLVFFMIATLSMASQSSLPVNLPHANGAQND-KQQVYTLTLTKDNQLFCDKEPVASPE--EAAQRLAQR-----SKDQQMSVIINADRSVEHGRVVELMDAIRQLGITRFAVA 129
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Match: A0A1V5C3M3_9DELT (Biopolymer transport protein ExbD n=1 Tax=Syntrophorhabdus sp. PtaU1.Bin050 TaxID=1811703 RepID=A0A1V5C3M3_9DELT) HSP 1 Score: 89.0 bits (219), Expect = 7.880e-20 Identity = 52/136 (38.24%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 34 KRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLPGANSAQSEQKSEEIVLTITKDGNYYLNKDRVEGPKLSEALTVLAQSRPGGLEATRQDSITLNVDLSAQHRYVVFAMDQLRKVGMNNYVIATQAAAP 441
K+ +IEIIPM+D MF LLVF++++SL++ G+PV+LP A SA+ E K + I LT+TK G +++ D V +E LA R +E ++ + D SA+H VV MD +R+VG++ + A P
Sbjct: 9 KKKARIEIIPMIDTMFFLLVFFMVASLSMTVQRGLPVNLPHAASARDEVK-QVITLTVTKGGRLFVDNDEVSSS--AEVAARLADRRKADVEL----AVLIKADRSAEHGRVVDLMDAVRQVGVSRIAVGVTANVP 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20149.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20149.1.1 >prot_P-wetherbeei_contig20149.1.1 ID=prot_P-wetherbeei_contig20149.1.1|Name=mRNA_P-wetherbeei_contig20149.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp MPLQLFTQTKKKRSPKIEIIPMVDVMFLLLVFYILSSLALHSNHGIPVDLback to top mRNA from alignment at P-wetherbeei_contig20149:348..797- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20149.1.1 ID=mRNA_P-wetherbeei_contig20149.1.1|Name=mRNA_P-wetherbeei_contig20149.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig20149:348..797- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20149:348..797- >mRNA_P-wetherbeei_contig20149.1.1 ID=mRNA_P-wetherbeei_contig20149.1.1|Name=mRNA_P-wetherbeei_contig20149.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig20149:348..797- (Phaeothamnion wetherbeei SAG_119_79)back to top |