mRNA_P-wetherbeei_contig20140.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A6N7GKQ6_9HYPH (MFS transporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GKQ6_9HYPH) HSP 1 Score: 343 bits (879), Expect = 2.530e-114 Identity = 185/264 (70.08%), Postives = 219/264 (82.95%), Query Frame = 1
Query: 1 EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLRIVMRR 792
+DL+ VL +FA +LP GSVVMMLAGPY M +GWQALWL+NGA L +ALVVAR+ E TQ ++L N+ AVLGAPGP+LLALAFG YTFQY+A+AGLLP LLVDRMGLSI+AAGT+SA+ VAANA GNMSAGALLR+GV W+I A AF VGLA GIFS+A PV +VA+LAA SLGLTGL+PGSI+AAAP+LAPTSA+LAI LGLI QVTN+GNL GP +MA V+ LGW+GAPLLFAGVA+AGV +AL+LR V+RR
Sbjct: 128 KDLEPVLAVFAAHLPFGSVVMMLAGPYAMTFGWQALWLINGAIVLGYALVVARMQFDETATTQAAAPSVLSNLGAVLGAPGPVLLALAFGTYTFQYLALAGLLPALLVDRMGLSIAAAGTVSAIAVAANAVGNMSAGALLRFGVPVWSIMAGAFTFVGLAAVGIFSSAAPVMLVAILAAASLGLTGLVPGSIYAAAPRLAPTSAVLAIALGLINQVTNLGNLAGPTSMAFTVQALGWSGAPLLFAGVAIAGVTIALLLRAVLRR 391
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A1W6ZSV0_9HYPH (MFS domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZSV0_9HYPH) HSP 1 Score: 319 bits (817), Expect = 6.210e-105 Identity = 167/264 (63.26%), Postives = 207/264 (78.41%), Query Frame = 1
Query: 1 EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLRIVMRR 792
D +TVL +F Y+P+GSV+MM+AGP+++AYGWQ LW+VNG L++A +VA L + E P NPGRA+LPNI+ VLGAPGP+LLALAFGIYTFQY AMAGLLPTLLVDRMGLSIS AG I+A TVAANA GNM AGAL+R+G W I A F VGLA FG+FS +PVAV+AV+A+ SL +TG+IP SI AAAP+ A +SALLAIVLGL+ Q TN+GNL GPA MA +V+ GW AP+LF GV +AG+ ++L+LR M+
Sbjct: 128 RDRETVLAVFGAYMPIGSVIMMVAGPHLVAYGWQTLWIVNGVVVLVYAALVAFLPLHEEAPPANPGRAVLPNIKQVLGAPGPILLALAFGIYTFQYAAMAGLLPTLLVDRMGLSISTAGAITAATVAANAVGNMFAGALVRFGAPLWGITAFGFSFVGLASFGVFSEGLPVAVIAVMASASLAVTGVIPASIFAAAPRFAASSALLAIVLGLVNQATNLGNLTGPAVMAFIVQHFGWVRAPMLFVGVTIAGLTISLLLRQAMKH 391
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A521VU73_9HYPH (MFS transporter n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VU73_9HYPH) HSP 1 Score: 282 bits (722), Expect = 1.460e-90 Identity = 158/261 (60.54%), Postives = 193/261 (73.95%), Query Frame = 1
Query: 10 DTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLRIVMRR 792
V L+ YLP G+ MML GPY+MA+GWQALW+VNG AL++A+ ++RL I EPP + GRA+L N R VLGAPGP LL L FGIYTFQY A+ GL+PTLLV ++GLSI AAG ISALTVAANA GN+SAGAL+R GV WA+ A +F GLA FGIFS A+PV +VA+LA LSL LTG IPGSI AAAP AP+ ALLA+ +GL+ Q +NIG L GPAA+ V+ GW APL+F VAG+A AL+LR + +R
Sbjct: 131 QAVFALWGVYLPGGAAAMMLGGPYLMAFGWQALWIVNGVVALIFAVGLSRLDIAEPPLPRVDGRAILANARRVLGAPGPALLGLTFGIYTFQYAALTGLMPTLLVHQLGLSIPAAGFISALTVAANAFGNLSAGALMRLGVPIWAVIAVSFGFQGLAAFGIFSQALPVWMVALLACLSLALTGAIPGSIFAAAPNYAPSPALLAVAIGLVNQTSNIGALAGPAALGAFVQAFGWAQAPLVFVAATVAGIAAALLLRRLRQR 391
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A833LM88_9HYPH (MFS transporter n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833LM88_9HYPH) HSP 1 Score: 261 bits (667), Expect = 2.870e-82 Identity = 147/264 (55.68%), Postives = 187/264 (70.83%), Query Frame = 1
Query: 1 EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLRIVMRR 792
D D V + YLP GS +MML GP + A GW+ LWLVNG AL +A VAR+ +PP + RAL NI V+ APGPLLLA FGIYTF Y A+ GLLP LLVDR+GL I+AAG +SALT AN GN+ AGAL+R G WA+AA+ FVV+G++GF IFS+ +PV V+A +AA +L ++GLIP SI AAAP+L ++ALL+I +GL +N+G LLGP A+A V+R GW+GAP LF GV VAG+A A+ LR V+RR
Sbjct: 128 SDSDRVFACWGVYLPAGSALMMLLGPLIAAPGWRMLWLVNGVLALAYAAAVARVVAAQPPAAETT-RALT-NIARVIRAPGPLLLATIFGIYTFHYFALTGLLPALLVDRLGLGIAAAGMVSALTALANGIGNLLAGALIRMGAPLWAVAAAGFVVMGISGFAIFSSQLPVVVIATVAAATLVISGLIPASIFAAAPRLTASAALLSITIGLAMNGSNLGQLLGPVALAAFVQRFGWDGAPFLFVGVMVAGLAAAMTLRAVLRR 389
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A127ETJ2_9HYPH (Major facilitator transporter n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ETJ2_9HYPH) HSP 1 Score: 241 bits (615), Expect = 1.560e-74 Identity = 139/265 (52.45%), Postives = 183/265 (69.06%), Query Frame = 1
Query: 1 EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLRIVMRRV 795
DLDT+L L+A YLP G+ +MML GP V+ GW+ LWL NGA L A+++ LA+ P PG N VL + LLLA FG+YTFQ+MAMAGLLPTLL++R GLS++ AG I+ALT ANAAGN SAG LLR GV W + AF ++G+A FGIFS + + V +LA SLGLTGLIPGS+ AAAP++AP A+L + LGLI Q +N+G+LLGPA + +V+ GW+ A +LFA +A+ G+A AL LR+ + +V
Sbjct: 129 RDLDTILSLWAAYLPSGAAIMMLVGPTVLEQGWRMLWLGNGALCLAAAMLLFFLAL--PDVAAQPGGRRFGNAGIVLRSKAALLLATTFGLYTFQFMAMAGLLPTLLIERAGLSVATAGMITALTWVANAAGNASAGLLLRAGVPMWTVPLGAFSLMGVAAFGIFSAGLSLTTVVILACTSLGLTGLIPGSVFAAAPRVAP--AMLVLTLGLINQGSNVGSLLGPAVLGSLVQHFGWDSAWILFAAIALCGIAAALGLRVALGKV 389
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A537MSS2_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MSS2_9PROT) HSP 1 Score: 225 bits (573), Expect = 3.430e-68 Identity = 126/259 (48.65%), Postives = 179/259 (69.11%), Query Frame = 1
Query: 1 EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLR 777
+D D V +A Y GSV++MLAGP + +GW++LW G AL +ALVV +A P G+ L +IR ++ PGP+LLALAFG Y+ QY A+ GLLPTLLV+R+GL++++AG ISA+ + AN G +SAG +LR G WA+ A+AF + A FGIF +M VA VAVLA SLG+TG++P SI+AAAP+ AP ALLA+ +G++ Q +++G+++GP+ + VERLGW+ +P LFA + G+AVAL +R
Sbjct: 129 KDRDVVFGCWAVYFAAGSVIVMLAGPLLAVFGWRSLWFSTGLLALAYALVVWWIAPAPPAAAPASGQGL-GDIRRIIRMPGPILLALAFGFYSIQYHALTGLLPTLLVERLGLTLASAGLISAIAIIANGIGGVSAGFMLRRGFRLWALFAAAFAFMAAAAFGIFGASMTVAGVAVLATASLGITGMLPASIYAAAPRFAPQPALLALTVGIVVQASHLGHVVGPSMLGAWVERLGWSSSPALFAAIGCGGLAVALGIR 386
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A1Q4D9Y3_9HYPH (MFS domain-containing protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4D9Y3_9HYPH) HSP 1 Score: 204 bits (519), Expect = 6.330e-60 Identity = 119/262 (45.42%), Postives = 172/262 (65.65%), Query Frame = 1
Query: 1 EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLA--IQEPPPTQN-PGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLR 777
D D V+ +++ Y+P+G V++MLAGP+V A GW+ LWL NG A+L+A V+A +A + Q+ P R+ L N R VL GP++LAL+F +YT Y A+ GL+PTL++DR+GLSI+ AG + ALT+ NA GN+SAG L R GV W + A +FV++ GIFS P A+VA LA +S+G +G++PGS+ AP P LL++ LG+I Q + IG LGPAA+ + GW+ AP+LF + V G+A++ LR
Sbjct: 141 RDDDMVMSVWSSYVPIGMVMIMLAGPWVAAGGWRLLWLGNGVLAILYAGVLALVAPTVAVRSGVQSAPRRSALDNARDVLRLRGPVVLALSFCLYTVHYHALVGLMPTLMIDRLGLSITTAGALVALTIFFNAIGNLSAGWLNRVGVPPWMLLAISFVLMATMSLGIFSPYAPAALVAALACVSVGFSGVVPGSVFVCAPSYTPRPELLSVTLGVIVQASTIGQFLGPAALGAWADNFGWSSAPILFVTLGVMGLALSFALR 402
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: UPI000E311A95 (MFS transporter n=1 Tax=Pelagibacterium sediminicola TaxID=2248761 RepID=UPI000E311A95) HSP 1 Score: 192 bits (489), Expect = 1.310e-55 Identity = 109/253 (43.08%), Postives = 159/253 (62.85%), Query Frame = 1
Query: 16 VLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALML 774
V L+A Y+P+G+V +MLAGP++M W+ LW++NG A A++V L + P + +I AV+ A P+LLALAF +YT QY A+ LPT LVDRMGL ++ AGT+SAL +A N AGN++AG +LR G WA+ F +GL+ F IF P+ + A + LGL L+P SI P+L ++ LA+ +G++ Q ++IG L GPA +AL +E GW G P LFA +A+ G+A+A++L
Sbjct: 133 VFALWASYMPVGTVAIMLAGPWLMQGDWRLLWILNGLLAAGHAILVLTLGRRGQPVAGKRVNPSVKDILAVVRAGTPVLLALAFTLYTIQYFALTTFLPTFLVDRMGLPLATAGTVSALALAVNIAGNIAAGFILRMGAPLWALFVVVFSTIGLSSFAIFHAGSPLVLAVAAAGVCLGLAALLPSSIIVTMPRLLASNQQLALAMGMVQQASSIGQLAGPALLALCIEWQGWGGVPYLFAAIAIGGLAIAVVL 385
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A562FDN8_9HYPH (Putative MFS family arabinose efflux permease n=2 Tax=unclassified Aminobacter TaxID=2644704 RepID=A0A562FDN8_9HYPH) HSP 1 Score: 182 bits (461), Expect = 1.640e-51 Identity = 108/258 (41.86%), Postives = 151/258 (58.53%), Query Frame = 1
Query: 16 VLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVVARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLRIVMR 789
V +A Y+P+G+ VM+L GP +M W+ LW +NG A A+++ L +E L +I AV A P+LLA F +YT QY A+ LPT L+++MGLS+ AAGT+SAL V ANA GN+SAG +LR G W+I A F +G+ G IF + PV V A L LGL L+P SI P+L ++ LA+ LG++ Q ++IG L GPA +A E GW G P LF +A G+ +A++ R +R
Sbjct: 133 VFAFWAAYMPVGAAVMILLGPALMQGDWRWLWTLNGIVAAAHAVLIFALRPKEAVAVARRASPTLGDIAAVFRAGTPVLLAFTFALYTIQYFALTTFLPTFLIEKMGLSLEAAGTVSALAVVANAIGNISAGFILRMGAPLWSIFAVVFTTIGVCGVAIFHPSSPVEVSVTAAGLCLGLAALMPSSILVTMPRLLSSNQQLALALGIVQQASSIGQLGGPALLAFWTEWQGWGGVPYLFVLIAACGLTIAMVARKALR 390
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Match: A0A1H6GQB3_MAGFU (Predicted arabinose efflux permease, MFS family n=1 Tax=Magnetospirillum fulvum TaxID=1082 RepID=A0A1H6GQB3_MAGFU) HSP 1 Score: 163 bits (413), Expect = 2.250e-44 Identity = 106/260 (40.77%), Postives = 144/260 (55.38%), Query Frame = 1
Query: 1 EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVV-ARLAIQEPPPTQNPGRALLPNIRAVLGAPGPLLLALAFGIYTFQYMAMAGLLPTLLVDRMGLSISAAGTISALTVAANAAGNMSAGALLRWGVSTWAIAASAFVVVGLAGFGIFSNAMPVAVVAVLAALSLGLTGLIPGSIHAAAPKLAPTSALLAIVLGLIGQVTNIGNLLGPAAMALVVERLGWNGAPLLFAGVAVAGVAVALMLR 777
ED T L+A ++P G V M+A P + GW+ LWL A L+AL+ RL Q+P R L ++R APGP+LLAL F YT Y+A+ G LPTLL++RMG++ AG ++A AAN GN++ G LLRWGV W A + + + FGIF PV + L L + GL+PG + AP AP L+ + LGLI Q +NIG + GP + V GW+ A L AGV + G A+ L+LR
Sbjct: 130 EDRHTAFGLWACFMPFGMAVSMMAAPLLPLIGWRGLWLGMAAFLALYALLAWVRLPAATGHGGQSPSR-LWHDLRQTASAPGPVLLALIFACYTTAYIALTGFLPTLLIERMGVTAGQAGMMTAAVAAANILGNLATGPLLRWGVPRWIPIILANLTIAGSAFGIFLPFTPVPLAYGLCLLLSAVGGLLPGCVLGGAPPYAPDPRLVPVTLGLIMQGSNIGQVTGPVLVGAAVAGWGWSAAAPLMAGVTLTGAALTLVLR 388 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20140.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20140.1.1 >prot_P-wetherbeei_contig20140.1.1 ID=prot_P-wetherbeei_contig20140.1.1|Name=mRNA_P-wetherbeei_contig20140.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=268bp EDLDTVLPLFAGYLPLGSVVMMLAGPYVMAYGWQALWLVNGAAALLWALVback to top mRNA from alignment at P-wetherbeei_contig20140:5..808+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20140.1.1 ID=mRNA_P-wetherbeei_contig20140.1.1|Name=mRNA_P-wetherbeei_contig20140.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig20140:5..808+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20140:5..808+ >mRNA_P-wetherbeei_contig20140.1.1 ID=mRNA_P-wetherbeei_contig20140.1.1|Name=mRNA_P-wetherbeei_contig20140.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig20140:5..808+ (Phaeothamnion wetherbeei SAG_119_79)back to top |