mRNA_P-wetherbeei_contig20124.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI001E4B763C (iron ABC transporter substrate-binding protein n=1 Tax=Leptospira sp. severe_002 TaxID=2838237 RepID=UPI001E4B763C) HSP 1 Score: 398 bits (1022), Expect = 3.990e-137 Identity = 199/247 (80.57%), Postives = 217/247 (87.85%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE*RADRACAG 742
NTANLEVVLALKPDLILDVGSTSETF SLA+RVQEQTGI YALLDGRFDAAAA+YRTLG LTHR KE E+LA+YAEDTMKT+ RIA +P +RP Y+ARGPRGL+TGLGGSINVETIE+LGA+NVAAERKGGLAQVS+EQVLLWNPDVIVTIDRDFAA VKTDP+WA VAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDI+ L +DF + V A+ +R AG
Sbjct: 96 NTANLEVVLALKPDLILDVGSTSETFTSLAKRVQEQTGIPYALLDGRFDAAAATYRTLGALTHREKEGESLAKYAEDTMKTIRERIARIPDDKRPRTYFARGPRGLETGLGGSINVETIEYLGAKNVAAERKGGLAQVSIEQVLLWNPDVIVTIDRDFAASVKTDPMWAPVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIKPLAKDFYTRFYHVTPNDAQ--IERVLAG 340
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI002012A575 (iron ABC transporter substrate-binding protein n=4 Tax=Bradyrhizobium TaxID=374 RepID=UPI002012A575) HSP 1 Score: 349 bits (895), Expect = 9.100e-118 Identity = 179/247 (72.47%), Postives = 199/247 (80.57%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE*RADRACAG 742
NTANLE V+ALKPDLILDVGST+ T VSLA RVQEQTGI YALLDGRFDA AA+YR LG LT R +AE LA YAE T+ T++ R+ +P RP VYYARGPRGL+TGLGGSINVET+EFLGARNVAAE+KGGLA VSVEQVL WNP VIVTIDRDFAA V++D WA V AV+ GRVHLSPKLPFGWVDFPPSVNRL GLWWLAKILYP+ FPED+R LTRDF + + A+ DR AG
Sbjct: 102 NTANLESVIALKPDLILDVGSTTPTLVSLATRVQEQTGIPYALLDGRFDATAATYRLLGALTRR--DAEPLATYAEATLATITARVNRIPENERPRVYYARGPRGLETGLGGSINVETLEFLGARNVAAEQKGGLATVSVEQVLAWNPAVIVTIDRDFAANVRSDAQWAGVTAVRDGRVHLSPKLPFGWVDFPPSVNRLIGLWWLAKILYPQHFPEDMRELTRDFYSRFYHIAPSDAD--IDRVLAG 344
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: A0A140GW77_9HYPH (Iron ABC transporter periplasmic protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GW77_9HYPH) HSP 1 Score: 348 bits (894), Expect = 1.130e-117 Identity = 167/225 (74.22%), Postives = 190/225 (84.44%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDF 676
NTANLEVVL LKPDLILDVG S+T++SLA RVQEQTGI YALLDG+FDA ++YR LG LT R +AE ARYAE TM T+ +RIA +P + RP VYY RGPRGL+TGLGGSIN+ETIEFLGA NVAAERKGG+ VSVEQVL WNPDVI+TID FAA V+ DP+WA + AV++GRVHLSP LPFGWVDFPPSVNRL GLWWLAK+LYPEQFPED++ LTRDF
Sbjct: 96 NTANLEVVLQLKPDLILDVGYISDTYISLANRVQEQTGIPYALLDGKFDAMVSTYRKLGALTGRPDQAEGFARYAEQTMTTIKQRIAKIPESERPRVYYGRGPRGLETGLGGSINMETIEFLGAHNVAAERKGGIVNVSVEQVLAWNPDVIITIDGGFAASVRNDPLWAPIKAVQSGRVHLSPHLPFGWVDFPPSVNRLIGLWWLAKVLYPEQFPEDLKPLTRDF 320
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI001BC35DCD (Iron ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001BC35DCD) HSP 1 Score: 347 bits (890), Expect = 4.270e-117 Identity = 172/232 (74.14%), Postives = 197/232 (84.91%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAV 697
NTANLE V+ALKPDLI+DVGSTS TFVSLA+RVQ+QTGI YALLDGRFDA A SYR LG LT R + A++LA YAE+T+ T++ RI S+PAA RP V+YARGPRGL+TGLGGSINVETIE L ARNVA ++GGLA VS+EQVLLWNP+VIVTID+ FAA V++DP WASVAAV+ RVHLSPKLPFGWVDFPPSVNRL GLWWLAKILYPE+FPED+ TRDF + V
Sbjct: 95 NTANLETVIALKPDLIIDVGSTSTTFVSLAQRVQDQTGIPYALLDGRFDATAESYRLLGALTQRQQPADSLAAYAEETLSTITGRIGSIPAAERPRVFYARGPRGLETGLGGSINVETIEML-ARNVAGVQRGGLANVSIEQVLLWNPEVIVTIDQTFAANVRSDPAWASVAAVQKNRVHLSPKLPFGWVDFPPSVNRLIGLWWLAKILYPERFPEDLNERTRDFYKRFYHV 325
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI001CD4ACCD (iron ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. BRP22 TaxID=2793821 RepID=UPI001CD4ACCD) HSP 1 Score: 343 bits (880), Expect = 1.360e-115 Identity = 173/238 (72.69%), Postives = 193/238 (81.09%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE 715
NTANLE VLALKPDL+LDVGST+ TF SLA RVQEQTGI YALLDGRF+A A++YR LG LTHR +AE A Y+E T+ T+ RI VP +RP VYYARGPRGL+TGLGGSINVETIEFLGARNVAAE +GGLA VSVEQVL+WNP VIVTIDRDFAA V+ D W V AV+AGRVHL+PKLPFGWVDFPPSVNRL GLWWLAKILYP+ F ED+R LTRDF + V A+
Sbjct: 95 NTANLESVLALKPDLLLDVGSTTPTFASLAARVQEQTGIPYALLDGRFEATASAYRLLGALTHR--DAEPFAAYSETTLATIKARIDRVPEDQRPRVYYARGPRGLETGLGGSINVETIEFLGARNVAAETRGGLATVSVEQVLVWNPQVIVTIDRDFAANVQNDAQWRQVDAVRAGRVHLAPKLPFGWVDFPPSVNRLIGLWWLAKILYPDHFDEDVRGLTRDFYSRFYHVTPSDAD 330
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI000463C727 (ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. ARR65 TaxID=1040989 RepID=UPI000463C727) HSP 1 Score: 343 bits (880), Expect = 1.360e-115 Identity = 172/238 (72.27%), Postives = 194/238 (81.51%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE 715
NTANLE VLALKPDLILD+GST+ TF SLA RVQEQTGI YALLDGRF+A A++YR LG LTHR +AE LA Y E T+ T+ R+ + +RP VYYARGPRGL+TGLGGSINVETIEFLGARNVAAER+GGLA VS+EQVL+WNP VIVTIDRDFA GV++DP WA AV+AGRV+LSPKLPFGWVDFPPSVNRL GLWWLA+I YP F EDIRALTRDF + V A+
Sbjct: 95 NTANLESVLALKPDLILDIGSTTPTFASLAARVQEQTGIPYALLDGRFEATASTYRQLGALTHR--DAEPLAAYTEKTLSTIKARVNEIAQDQRPRVYYARGPRGLETGLGGSINVETIEFLGARNVAAERQGGLATVSMEQVLVWNPQVIVTIDRDFADGVRSDPQWAQAEAVRAGRVYLSPKLPFGWVDFPPSVNRLIGLWWLARIFYPGHFDEDIRALTRDFYSRFYHVSPSDAD 330
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI001B8A47F1 (iron ABC transporter substrate-binding protein n=2 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI001B8A47F1) HSP 1 Score: 343 bits (879), Expect = 1.930e-115 Identity = 176/247 (71.26%), Postives = 195/247 (78.95%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE*RADRACAG 742
NTANLE VLALKPDLILDVGST+ TF SLA RVQEQT I YALLDGRF+A A+YR LG LTHR +AE LA YAE T+ T+ R+ +P RP VYYARGPRGL+TGLGGSINVET+EFLGARNVA ++KGGLA VSVEQVL WNP VI+TIDRDFAA V DP WA VAAV+ RVHLSPKLPFGWVDFPPSVNRL GLWWLAKILYP FPED+R LTRDF + V + A+ +R AG
Sbjct: 95 NTANLEAVLALKPDLILDVGSTAATFASLAARVQEQTKIPYALLDGRFEAIPATYRLLGALTHR--DAEPLAAYAEQTLTTIRTRLDRIPQHERPRVYYARGPRGLETGLGGSINVETLEFLGARNVAGDQKGGLATVSVEQVLAWNPSVIITIDRDFAANVGRDPQWADVAAVRDRRVHLSPKLPFGWVDFPPSVNRLIGLWWLAKILYPNYFPEDMRGLTRDFYSRFYHVTPQDAD--IERVLAG 337
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI001BABA036 (iron ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. JYMT SZCCT0180 TaxID=2807666 RepID=UPI001BABA036) HSP 1 Score: 343 bits (879), Expect = 2.070e-115 Identity = 172/238 (72.27%), Postives = 194/238 (81.51%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE 715
NTANLE VLA KPDLILDVGSTS TFVSLA +VQEQTGI YALLDGRF A +YRTLG+L R ++AE LARYAEDT+KT+ R+A V A RP VYYARGPRGL TGLGGSINVETIE LG RNVA E +GGLA VS+EQVL+WNPDVIVTID++FAA V++D WASV AV+ RVHLSPK+PFGWVDFPPSVNRL GLWWLAK+LYPE+FPED+R LT DF + V A+
Sbjct: 96 NTANLETVLAAKPDLILDVGSTSATFVSLAEKVQEQTGIPYALLDGRFAGIAGTYRTLGELIGRTEDAEKLARYAEDTLKTILDRVAPVAAGDRPKVYYARGPRGLSTGLGGSINVETIEMLG-RNVAGETQGGLANVSIEQVLVWNPDVIVTIDQEFAANVRSDAAWASVKAVRDNRVHLSPKMPFGWVDFPPSVNRLIGLWWLAKLLYPERFPEDLRTLTADFYSRFYHVTPTAAQ 332
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: UPI001FCEE444 (iron ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium algeriense TaxID=634784 RepID=UPI001FCEE444) HSP 1 Score: 342 bits (877), Expect = 4.160e-115 Identity = 174/247 (70.45%), Postives = 196/247 (79.35%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE*RADRACAG 742
NTANLE VLALKPDLILDVGST+ TFVSLA RVQEQTGI YALLDGRF+ A+YR LG+LT R +AE LA Y E+T+ + R+ +P RP YYARGPRGL+TGLGGSINVETIE+LGARNVA ERKGGL VS+EQVLLWNPDVIVTIDRDFAA V++D +W VAAV++GRVHLSPKLPFGWVDFPPSVNRL GLWWLA+I YP+ F EDIR LTRDF + V A+ DR AG
Sbjct: 97 NTANLESVLALKPDLILDVGSTAPTFVSLAARVQEQTGIPYALLDGRFEVMPATYRLLGKLTLR--DAEPLAAYTEETLVKIQARVNRIPENERPRAYYARGPRGLETGLGGSINVETIEYLGARNVAGERKGGLTTVSIEQVLLWNPDVIVTIDRDFAANVRSDALWREVAAVRSGRVHLSPKLPFGWVDFPPSVNRLIGLWWLAQIFYPDHFQEDIRTLTRDFYTRFYHVTPSDAD--LDRVLAG 339
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Match: A0A0R3KI95_9BRAD (ABC transporter substrate-binding protein n=5 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3KI95_9BRAD) HSP 1 Score: 341 bits (875), Expect = 8.100e-115 Identity = 173/238 (72.69%), Postives = 194/238 (81.51%), Query Frame = 2
Query: 2 NTANLEVVLALKPDLILDVGSTSETFVSLARRVQEQTGISYALLDGRFDAAAASYRTLGQLTHRAKEAEALARYAEDTMKTVSRRIASVPAARRPSVYYARGPRGLDTGLGGSINVETIEFLGARNVAAERKGGLAQVSVEQVLLWNPDVIVTIDRDFAAGVKTDPVWASVAAVKAGRVHLSPKLPFGWVDFPPSVNRLAGLWWLAKILYPEQFPEDIRALTRDFXXXXHAVLSRHAE 715
NTANLE VLALKPDLILDVGSTS TFVSLA RVQEQT I YALLDGRF A A +YRTLG L R +++E LARYAEDT+KT+ RI + A RP VYYARGPRGL TGLGGSINVETIE LG RNVA E +GGLA VS+EQVL+WNPDVIVTID++FAA V+ DP WA+V AV+ R+HLSPK+PFGWVDFPPSVNRL GLWWLAKILYPE+FPED+RALT DF + V A+
Sbjct: 95 NTANLETVLALKPDLILDVGSTSATFVSLADRVQEQTSIPYALLDGRFAAIAETYRTLGALIGRREDSEKLARYAEDTLKTILGRIEPIARAERPKVYYARGPRGLSTGLGGSINVETIEMLG-RNVAGETQGGLANVSIEQVLVWNPDVIVTIDQEFAATVRKDPSWAAVKAVRDNRIHLSPKMPFGWVDFPPSVNRLIGLWWLAKILYPERFPEDLRALTTDFYARYYHVTPSPAQ 331 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20124.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20124.1.1 >prot_P-wetherbeei_contig20124.1.1 ID=prot_P-wetherbeei_contig20124.1.1|Name=mRNA_P-wetherbeei_contig20124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp QHREPRGGAGAEARSHSRRRLDQRDVRFAGAARAGADRHFLCLARRTFRCback to top mRNA from alignment at P-wetherbeei_contig20124:491..1242- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20124.1.1 ID=mRNA_P-wetherbeei_contig20124.1.1|Name=mRNA_P-wetherbeei_contig20124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=752bp|location=Sequence derived from alignment at P-wetherbeei_contig20124:491..1242- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20124:491..1242- >mRNA_P-wetherbeei_contig20124.1.1 ID=mRNA_P-wetherbeei_contig20124.1.1|Name=mRNA_P-wetherbeei_contig20124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig20124:491..1242- (Phaeothamnion wetherbeei SAG_119_79)back to top |