mRNA_P-wetherbeei_contig2010.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2010.3.1
Unique NamemRNA_P-wetherbeei_contig2010.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: D8LIZ6_ECTSI (Chp-1 / RAR1 homologue n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIZ6_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 2.650e-111
Identity = 170/342 (49.71%), Postives = 216/342 (63.16%), Query Frame = 1
Query:    1 MKVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHME--------ANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCEKRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPVVPAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDD 1002
            MKVY+H+EEG D + H+TLKLTLP+KW+ +SPVR+L+LF+++YNKRKPD  LD++  H+E        A    L K DTIG ++ DR DV V  G T EG      A                      AT    AG     RCRN+GCN+ Y EA+NS  AC  HT PP+FHDT+KGWSCC+KRVYDWDEF+ + GC  G HSTVDPK+     PN  S  ++ AA P       P ++SI+++N  NP+A TAA   V S+ A  ++ TRRPDGTA  V  GCQ+DFVVAEN   +CR+H   PVFHD GK+W CCP  VKY+F+DF+ +PGC +G HDD
Sbjct:    1 MKVYVHFEEGSDAELHVTLKLTLPKKWNDESPVRLLKLFIDSYNKRKPDNQLDVDECHLETGASLDQGAEEQALAKGDTIGATITDRADVFVRPGATKEGMG--AAAXXXXXXXXXXXXXXXXXXXXXXATAPKRAG---ALRCRNFGCNQYYDEADNSDTACRFHTGPPIFHDTRKGWSCCKKRVYDWDEFEQLQGCQVGRHSTVDPKDRL--PPNPPSAEQEVAAKP------APVLKSIDNYNAENPEAATAAGSAVKSITA-KKKCTRRPDGTASCVNLGCQKDFVVAENQRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFMAVPGCCIGFHDD 328          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: A0A6V2Q7H8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Q7H8_HETAK)

HSP 1 Score: 334 bits (857), Expect = 8.880e-111
Identity = 171/336 (50.89%), Postives = 211/336 (62.80%), Query Frame = 1
Query:    1 MKVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHME-ANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCEKRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPVVPAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDDG 1005
            MKVY+HYEEG D   H TLKLTLP+KW      +VL+LF+E+YN + P   L++ +VH+E + G  ++  D + + M DR D+ V  G  P     P  A K   +   T                    ++G  RCRNYGCN+ Y EAEN  EAC HHTAPP+FHD +KGWSCC KRVYDWDEFQ I GC RGPHSTVDP+  FAASP  V+  + A A  P      P ++SI+ FN +NP+A TAA   V ++  + ++ TRR DGTAK    GCQRDFVVAEN P +C +H   PVFHDTGKYW+CCPG VKYDFDDF+ I GC  G H DG
Sbjct:    1 MKVYVHYEEGSDESLHKTLKLTLPKKWADKETNKVLDLFLESYNAKNPGNLLEMGSVHLENSRGQKMSGQDLVKDLMNDREDIHVRPGAPPAHQEAP--AAKEQKSEAQT--------------------NEGKLRCRNYGCNQWYLEAENGPEACGHHTAPPIFHDARKGWSCCAKRVYDWDEFQQIAGCARGPHSTVDPQVTFAASPT-VAAADAAEAKNPG-----PVLKSIDQFNEANPEAVTAAASAVQTLKVSGQKCTRRGDGTAKCTNKGCQRDFVVAENTPRSCTYHAANPVFHDTGKYWSCCPGKVKYDFDDFMKIAGCCTGYHQDG 308          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: A0A836CMP5_9STRA (Chp-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP5_9STRA)

HSP 1 Score: 333 bits (855), Expect = 5.340e-110
Identity = 182/343 (53.06%), Postives = 210/343 (61.22%), Query Frame = 1
Query:    4 KVYLHYEEGEDTKRHMTLKLTLPRKWDGD-SPVRVLELFVEAYNKRKPDTPLDLENVHME-ANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCEKRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPVVPA------VRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQ-RDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDDG 1005
            KVYLHYEEG D + H TLKLTLPRKW  + SP++VLELF+E+YNK+KP TPL  E  H+E ++G+ L+  D IG+ M DR D+ V  G T  G            +   T + G        A     A  DGL RCRNYGC  RYAEA+N   AC HHTAPP+FHDTKKGWSCC KRVYDWDEFQAI GC  GPHSTVDPK   A S                             VRSIE +N +NP A TAA   + + AAA R  TRR DGTA+ +  GC+ +DFVVAEN   AC HH   PVFHDTGKYWACCP  VKY+FDDF+ IPGC  G H DG
Sbjct:    4 KVYLHYEEGSDAELHTTLKLTLPRKWVAEGSPMQVLELFIESYNKKKPQTPLSAEACHLENSDGLALSAGDVIGDVMRDREDIRVRPGATKPGK-----------SDVATAAAGGXXXXXXXAA----ADTDGLLRCRNYGCGARYAEADNHARACAHHTAPPVFHDTKKGWSCCAKRVYDWDEFQAIAGCATGPHSTVDPKVQIAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSIEAYNAANPQAATAAGSVLKAXAAAPR-CTRRADGTARCLNKGCKAQDFVVAENARDACTHHRLGPVFHDTGKYWACCPDRVKYEFDDFLAIPGCCRGYHQDG 330          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: W7U2Z9_9STRA (Chord family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2Z9_9STRA)

HSP 1 Score: 322 bits (825), Expect = 8.400e-106
Identity = 164/344 (47.67%), Postives = 211/344 (61.34%), Query Frame = 1
Query:    1 MKVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTP-LDLENVHME-ANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCEKRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPVVPAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDDGEQQPAEA 1026
            MK+Y+HYEE    ++ +TLKLTLP+ W     ++VLELF+E+YNK+K   P LD + VHME A GV L   + + + + DR D+ +  GP P       R   A L+               P   A      GL RC+NYGCN+ ++E  NS EAC  H APP+FHDTKKGWSCC KRVYDWDEF  I GCT G HS +DPKE+FA SP   +  +               ++SI++FN SNP+A  AA     SM  A  R T +PDG+A  +  GCQ+D+++ EN+P+ACR+H   PVFHD GKYW+CCPGTVKYDFDDF+ IPGC + SH DG Q+  EA
Sbjct:    1 MKLYVHYEEAGQDEKALTLKLTLPKSWAEQPLLQVLELFIESYNKKKTGLPPLDKDFVHMEKAGGVILPVGNIVSDMLSDRDDLYIRSGPGP------ARGKIAHLSSP-------------PNAHASSESSTGLLRCKNYGCNQSFSEENNSEEACRFHKAPPVFHDTKKGWSCCAKRVYDWDEFHTIEGCTTGRHSLIDPKEIFAPSPTLAAAAQAERGDCSNTSSAATVIKSIDEFNQSNPNAA-AACKTAASMTQAGTRCTVKPDGSATCLNKGCQKDYLLKENHPSACRYHAAGPVFHDAGKYWSCCPGTVKYDFDDFLKIPGCMLSSHYDGSQESLEA 324          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: A0A0N7L5F1_PLAHL (Chord family protein n=3 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5F1_PLAHL)

HSP 1 Score: 273 bits (698), Expect = 5.520e-87
Identity = 140/331 (42.30%), Postives = 187/331 (56.50%), Query Frame = 1
Query:   13 LHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHMEANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCE-KRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPVVPAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDD 1002
            +HYE+G + +  +TLK+ LP KW G +   + + FVE YN +KP+  LD   +H+E  G  +   D +  + V + D L  +    +  PKP+RA  +A                     A +  D    +C+N+GC K+Y E ENS +AC HH+ PPLFHD KKGW CC  K VYDWD+F+ I  C  G HS V P E FAASP   +    AA    A VP   +++SIED+N  NPDA TA     +S  A      +R DG A  V  GCQ+++VV EN   +C+HH  PPVFHD GK+W+CCP  VKYDFD F+ +PGC V +H D
Sbjct:    1 MHYEDGTEVQT-LTLKMVLPSKWAGHTVDYLKDFFVEHYNTKKPENVLDATEMHLEKKGNAILFGDELLHTAVQKYDDLFLK--PGKSMPKPVRAQNSA---------------------ASVTSDAKYKQCKNHGCQKKYLEEENSDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCVTGRHSDVGPNEKFAASPTVAAAENAAANSASATVPPASSLKSIEDYNQKNPDAVTAVSAAKSSQTAP---PPKRTDGKANCVNYGCQQEYVVVENTDTSCKHHAGPPVFHDAGKFWSCCPKDVKYDFDSFLKVPGCVVSAHTD 304          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: K3X7U4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7U4_GLOUD)

HSP 1 Score: 272 bits (695), Expect = 2.960e-86
Identity = 140/336 (41.67%), Postives = 195/336 (58.04%), Query Frame = 1
Query:    4 KVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHMEANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCE-KRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPV--VPAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDD 1002
            KVY+H+EEG D   H+TLK+TLP KW   +   + E FVE YN +KP++ LD    H+E     L   + +  ++    D+ +  G + +   KP++A   A      Q+                     L +C+N+GC K++AE +N  EAC HH  PP FHD KKGWSCC  K VYDWD+F+ IP C    HS V P   FA SP  ++  E+A A   A VP    P ++SI+D+N +NP+A TA    V+++ +A   +  R DG A+ V  GCQ+++VVAEN+P +C HHT PPVFHD GK+W+CCP  VKYDF+ F+ +PGC   +H D
Sbjct:   18 KVYMHFEEGADAALHLTLKMTLPSKWASHTVDYLKEFFVEHYNTKKPESKLDGALFHLERKSTALHGDELLHYAVQKHDDLFLKSGASTK---KPVKAEGVAKKAAAAQN---------------------LLQCKNFGCAKKFAEEDNHDEACHHHAQPPTFHDMKKGWSCCSSKMVYDWDDFEKIPACKVSRHSVVAPSAQFAKSPTVLA-AENAEALGAASVPAPAAPVLKSIDDYNKTNPNAVTAVSAAVDNLTSA---APARTDGKARCVNYGCQKEYVVAENSPTSCTHHTGPPVFHDAGKFWSCCPKNVKYDFESFLQVPGCATAAHRD 325          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: A0A8K1FGH1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH1_PYTOL)

HSP 1 Score: 272 bits (695), Expect = 4.060e-86
Identity = 142/336 (42.26%), Postives = 191/336 (56.85%), Query Frame = 1
Query:    4 KVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHMEANGVTLTKADTIGESMVDR-GDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCE-KRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPN-AVSPGEDAAAGPPAEVPVVPAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDD 1002
            KVY+HYEEG + + H+TLK+TLP KW G +   +   FV+ YN +KPD  L+    H+E     +   D +  + V++  D+ +  GP+    PKP  A KA                        +A +  L +C+NYGC  +Y EA+N  +AC HH  PPLFHDTKKGW CC  K VYDWD+F+ I  C  G HSTV+P   FAASP  A++    A           P ++SI+D+N  NP+A TA         +    +  R DG A+ V  GCQ+++VVAEN+  AC HHT PPVFHD GKYW+CCP  VKYDF+DF+ +PGC   +H+D
Sbjct:   29 KVYMHYEEGAE-ELHVTLKMTLPSKWAGHTVDYLKAFFVDHYNTKKPDNKLEASEYHLEKKNHNVLYGDDLLHTAVEKYEDIFLKAGPSTTRPPKP-EAAKA------------------------VAVNKNLLQCKNYGCRAKYDEADNHDQACRHHMKPPLFHDTKKGWQCCSSKMVYDWDDFEKIEPCAVGRHSTVEPSAQFAASPTVALAESAGAXXXXXXXXXXXPVLKSIDDYNQKNPNAVTAVSAATEEKVST---AAGRTDGKARCVNFGCQKEYVVAENHEQACTHHTGPPVFHDAGKYWSCCPKAVKYDFEDFLKVPGCATAAHND 335          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: A0A5D6Y7M6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7M6_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.370e-85
Identity = 143/338 (42.31%), Postives = 190/338 (56.21%), Query Frame = 1
Query:    4 KVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHMEANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCCE-KRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPVV------PAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSH 996
            KVY+HY+E  D   H+TLK+TLP KW G +   + E FVE YN +KPD  LD    H+E     L   + +  ++    D+ +  GP+   + KP++A       T T            A  +G A    L +C+N+GC +++AE+EN   AC HH  PP FHD KKGWSCC  K VYDWD+F+ IP C  G HS   P   FA SP  ++  E A                 P ++SI+D+N  NP+A TA    +++  AA   +  R DG A+ V  GCQ++FVVAEN P AC HHT PPVFHD GK+W+CCP  VKYDFD F+ +PGC + SH
Sbjct:   19 KVYMHYDESADAALHLTLKMTLPSKWAGHTVDYLKEFFVEHYNTKKPDEQLDAAQFHLERKNAPLHGDELLHFAVQKHDDLFLRAGPS---TTKPVKA------ETTT------------AAASGRASAQHLLQCKNFGCAQKFAESENHERACRHHAQPPTFHDMKKGWSCCSSKMVYDWDDFEKIPTCQLGRHSPDSPATEFAKSPTVLA-AEGAXXXXXXXXXXXXXXXXXPVLKSIDDYNKKNPNAVTAVSAAIDTQTAA---APVRADGKARCVNYGCQQEFVVAENAPDACVHHTGPPVFHDAGKFWSCCPKLVKYDFDSFLKVPGCAIASH 331          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: A0A6G0XA72_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA72_9STRA)

HSP 1 Score: 256 bits (653), Expect = 5.410e-80
Identity = 144/337 (42.73%), Postives = 189/337 (56.08%), Query Frame = 1
Query:    4 KVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHME-ANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCC-EKRVYDWDEFQAIPGCTRGPHSTVDPKELFAASPNAVSPGEDAAAGPPAEVPVVPA--VRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDD 1002
            KVYLH+EEGE+   H+TLKLT+P KW G +  R+ E F+E YN+RKPD  ++    H+E + G  L   +TI E + +R D+ V  GP+                 TF        R  F            L +C+N+GC +++ +A N   AC HHT PP FHD KKGW CC EK  YDW+EF+ I  C  G HS V       A+P A   G  A   P    P  PA  ++SI+D+N  NPDA TA    V+++ A   +   R DG AK V  GCQ+++VVAENN  +C HH   PVFHD+GKYW+CCP  +KYDFD+F+ IP C V +H D
Sbjct:   18 KVYLHFEEGEEAN-HLTLKLTIPSKWSGATIDRLKEFFLETYNERKPDNKVNPVEYHLERSEGRILRGDETIHEMIKNRDDIYVKPGPS-----------------TFKH------RKDFADEERERQQPKDLIQCKNFGCREKFNDANNHATACKHHTQPPTFHDGKKGWQCCMEKLAYDWEEFEKIAPCAVGFHSAVG-----LAAPKAEPTGFGAPI-PILAAPAAPATALKSIDDYNEKNPDAVTA----VSAIKAPKPKPAPRADGKAKCVNYGCQKEYVVAENNDTSCPHHAGAPVFHDSGKYWSCCPKVIKYDFDEFLKIPPCVVTAHSD 320          
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Match: A0A024U7E8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7E8_9STRA)

HSP 1 Score: 253 bits (646), Expect = 5.420e-79
Identity = 139/339 (41.00%), Postives = 190/339 (56.05%), Query Frame = 1
Query:    4 KVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDTPLDLENVHMEANGVTLTKAD-TIGESMVDRGDVLVARGPTPEGSPKPLRACKAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAENSREACLHHTAPPLFHDTKKGWSCC-EKRVYDWDEFQAIPGCTRGPHSTVD----PKELFAASPNAVSPGEDAAAGPPAEVPVVPAVRSIEDFNTSNPDATTAAXXXVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVFHDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDD 1002
            K+YLH+EEG++   H+TLKLT+P KW G +  R+ E F++ YN+RKPD  +D    H+E +     + D TI +++ +R D+ V  GP                      S   H +         +A  D L +C+N+GC +++   EN   AC HHT PP FHDTKKGW CC EK VYDW++F+ I  C  G HST      PKE            E    G P  V   PAV+SI+++N +NP+A TA    V++ A  S+ +  R DG A+ V  GCQ+++VVAENN  AC HH   P+F D GK+W+CCP  VKYDFD+F+ IP C V +H D
Sbjct:   18 KIYLHFEEGDEAN-HLTLKLTIPSKWSGATVDRLKEFFLDTYNERKPDNKVDPNAYHLERSENRALRGDETIHDTIKNRDDIYVKLGP----------------------STYKHKKDLADEERERLAPKD-LVQCKNFGCREKFNPVENHASACKHHTKPPTFHDTKKGWQCCTEKLVYDWEQFELIEPCAVGFHSTTGIAPPPKE------------ESTGFGAPVLVVPAPAVKSIDEYNQNNPNAVTA----VSAAAPKSKPAAVRTDGKARCVNYGCQKEYVVAENNERACPHHVGAPIFRDAGKHWSCCPKIVKYDFDEFLKIPPCVVTAHTD 316          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2010.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIZ6_ECTSI2.650e-11149.71Chp-1 / RAR1 homologue n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6V2Q7H8_HETAK8.880e-11150.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CMP5_9STRA5.340e-11053.06Chp-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A... [more]
W7U2Z9_9STRA8.400e-10647.67Chord family protein n=2 Tax=Monodopsidaceae TaxID... [more]
A0A0N7L5F1_PLAHL5.520e-8742.30Chord family protein n=3 Tax=Plasmopara halstedii ... [more]
K3X7U4_GLOUD2.960e-8641.67Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FGH1_PYTOL4.060e-8642.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y7M6_9STRA2.370e-8542.31Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0XA72_9STRA5.410e-8042.73Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024U7E8_9STRA5.420e-7941.00Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2010contigP-wetherbeei_contig2010:2943..6103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIZ6
PFAMsCHORD
Model size1029
Max annot lvl2759|Eukaryota
KEGG koko:K13458
KEGG Pathwayko04626,map04626
Hectar predicted targeting categoryother localisation
GOsGO:0002252,GO:0002376,GO:0002679,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008324,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009626,GO:0009814,GO:0009816,GO:0009817,GO:0009987,GO:0012501,GO:0015075,GO:0015318,GO:0016020,GO:0017016,GO:0017048,GO:0019899,GO:0022857,GO:0022890,GO:0031072,GO:0031267,GO:0031647,GO:0033554,GO:0034050,GO:0034220,GO:0042742,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045087,GO:0045730,GO:0046872,GO:0046914,GO:0050821,GO:0050832,GO:0050896,GO:0051020,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0051716,GO:0051879,GO:0055085,GO:0065007,GO:0065008,GO:0098542,GO:0098655
Exons8
Evalue4.34e-112
EggNOG OGsKOG1667@1|root,KOG1667@2759|Eukaryota
Ec32 ortholog descriptionchp-1 / RAR1 homologue
Ec32 orthologEc-20_002120.1
Descriptionnegative regulation of Rho-dependent protein serine/threonine kinase activity
Cds size1029
COG categoryS
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2010.3.1prot_P-wetherbeei_contig2010.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2010 2943..6103 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186190.9311829-CDS-P-wetherbeei_contig2010:2942..30961683186190.9311829-CDS-P-wetherbeei_contig2010:2942..3096Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 2943..3096 -
1683186190.9433932-CDS-P-wetherbeei_contig2010:3546..35961683186190.9433932-CDS-P-wetherbeei_contig2010:3546..3596Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 3547..3596 -
1683186190.9523473-CDS-P-wetherbeei_contig2010:3819..39681683186190.9523473-CDS-P-wetherbeei_contig2010:3819..3968Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 3820..3968 -
1683186190.961973-CDS-P-wetherbeei_contig2010:4331..44421683186190.961973-CDS-P-wetherbeei_contig2010:4331..4442Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 4332..4442 -
1683186190.971365-CDS-P-wetherbeei_contig2010:4717..48301683186190.971365-CDS-P-wetherbeei_contig2010:4717..4830Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 4718..4830 -
1683186190.980587-CDS-P-wetherbeei_contig2010:5137..52871683186190.980587-CDS-P-wetherbeei_contig2010:5137..5287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 5138..5287 -
1683186190.989432-CDS-P-wetherbeei_contig2010:5523..56401683186190.989432-CDS-P-wetherbeei_contig2010:5523..5640Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 5524..5640 -
1683186190.9983716-CDS-P-wetherbeei_contig2010:5918..61031683186190.9983716-CDS-P-wetherbeei_contig2010:5918..6103Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2010 5919..6103 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2010.3.1

>prot_P-wetherbeei_contig2010.3.1 ID=prot_P-wetherbeei_contig2010.3.1|Name=mRNA_P-wetherbeei_contig2010.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=343bp
MKVYLHYEEGEDTKRHMTLKLTLPRKWDGDSPVRVLELFVEAYNKRKPDT
PLDLENVHMEANGVTLTKADTIGESMVDRGDVLVARGPTPEGSPKPLRAC
KAALTPTFTQSVGFHCRPHFPATVAGMAGDDGLSRCRNYGCNKRYAEAEN
SREACLHHTAPPLFHDTKKGWSCCEKRVYDWDEFQAIPGCTRGPHSTVDP
KELFAASPNAVSPGEDAAAGPPAEVPVVPAVRSIEDFNTSNPDATTAAAA
AVNSMAAASRRSTRRPDGTAKRVEPGCQRDFVVAENNPAACRHHTKPPVF
HDTGKYWACCPGTVKYDFDDFVTIPGCTVGSHDDGEQQPAEA*
back to top

mRNA from alignment at P-wetherbeei_contig2010:2943..6103-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2010.3.1 ID=mRNA_P-wetherbeei_contig2010.3.1|Name=mRNA_P-wetherbeei_contig2010.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3161bp|location=Sequence derived from alignment at P-wetherbeei_contig2010:2943..6103- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGTCTACCTGCACTATGAGGAAGGAGAGGACACCAAGCGCCACAT GACGCTGAAGCTTACGCTTCCTCGCAAGTGGGACGGCGACTCACCGGTCC GAGTACTAGAACTGTTCGTGGAGGCTTACAATAAGAGGAAGCCGGACACG CCGCTGGACTTGGAAAATGTGCACATGGAAGCGAAGTGAGTCGAAACATG TTTGGATAGAAGAACAGACAAATATCCCCGTATCGGAAGAGGAAAGGATG TTCTTTTTCGCTTGTTTGCAGATTTAATTCCAACTTTGATTGACATGATG GGGAAATGTCGCGGCGAAAGGATGCCGTTTAGGTGCACAAAATCTTTGCA ACAGCGCTTTGTCCTTATTTTGCCCGTTCTTGCTTGCCCTGGCAATCTCT CTTCACCTTTTCGTCGGGAGTGCCCTGGCCCACGCCCCCTTTACCTTCGC CTGACCGGCTCAGCGGGGTGACGCTGACCAAGGCGGACACCATCGGCGAG AGCATGGTCGACCGGGGCGATGTTTTGGTGGCGCGGGGTCCGACGCCGGA GGGGAGCCCCAAGCCATTGCGTGCCTGTAAGTGTTTTTCCCCCCCTTTTT TTCTTTTAGCGAGCTTCTTCTGGCTTTTCGCGGTGCCGTTGGATCATTAT CATTTTGATGTCTTTTGCCGTAACGTTCCAGCCGGTCAGCACAGCCTCGG TGATGCAAAAAAGTTTTACTTCCTGTCGCTCCAGATGCACATGCACGTTC ACGCAAGCAGTCGGGAGCGCGGAGATCAACTATGTAGTCGCTTAGAATGC GTTTACGGCAGCTCAGGGCCGCTCTAACGCCGACTTTCACCCAATCTGTG GGTTTCCACTGTCGGCCGCACTTCCCAGCAACTGTGGCCGGGATGGCCGG CGACGACGGGCTGTCGCGGTGCCGGAACTACGGCTGCAACAAGCGCTATG CAGAGGCGGAGAACAGGTGCGGGGGCTTGATGCGATGGCGGTGACAACAC CAGCTGTCCCTATTTCTTTTTCAAAGTCTTTTTGTTATTCTTGTGGAGGA AAATACCCTTCTCGTGTCCCGGTATATTTACCCAGTAACGAACTTTGAAC ACGTGCGAGATGCGATCGGTCCTCGCTCATTTGCACCGAATATCCCCACC TAGTGCATTCCCTCTTTTGCACCGATTGACTCCCGTTGACGTGAAAACTG GAACGGGAACCGACGCGAAAATCTTATACTCTTGGGGAAACGTTTGTTTG CCGCGCGACGTGTGATGTGACAGCCGCGAGGCGTGCCTGCACCACACGGC GCCGCCGCTGTTCCACGACACCAAGAAGGGGTGGAGCTGCTGCGAGAAGC GCGTCTATGACTGGGACGAATTCCAGGCCATCCCAGGTAGGCGGCCGGCA GTTCGTTCAGTTCCAAGGCGGTTTCCATTTGGGGAAACCTTGGCGTTCTT CAGGTTCCGTCTTACCCTTGCTGGTACTAACGTTCCGCGAGGCAAAGCCA TGGCTAGAAGATACTTCCTCAAGTCGCAGCGTAGCGGCTGGCTTCCCTAT TTTTTCCAAACCGAACTGTTGGCGGCGAAGGCTCCTTGCCGCGTTGATGG AGGGGTCCTGTTTATCTTCTTATGCCCTGCTTTCTGTGCCTGTCAATTCG GGAAAGGGCAGGGTGCACCCGCGGGCCCCACAGCACCGTGGACCCAAAAG AGCTCTTCGCGGCGTCTCCGAACGCCGTCAGCCCCGGCGAGGACGCAGCG GCCGGCCCCCCGGCAGAGGTGCGTTTTCAAGAGTCGGATCGGATCCGTTG CTGCGTCTACGGAGTTGCGTACTCGCGAAGGCGTGCTGCTTGCGTTTCCA CTTCCATCCTTCCGGGACATGCGTTCGGAGGGAACCCGCTGTTGCCGTTC ACCATGACATATGCAGCGCTGTTAGGGACTCGAAAATTGCAAGGAGCAAT TTTCGGTATCGGGTCCCATTGATTGGTTCCGTGACGTCGATACATGTTCT CGTTTTTTGCCAAGAGCGTACAATGGCTGCAAACGCGCAGCCGTCATCTG TCAAACGCATCCCTTTCATACAAATTATGCATTCGTGGCCTGCTGTGCAC TTTTGCTTCCCTCTTTTCTTTCTTTCAGATGGCAGCGGTGGTCCCGGCGG TGCGGTCGATTGAGGACTTCAACACCTCCAACCCCGACGCCACCACGGCG GCGGCGGCGGCCGTCAACAGCATGGCGGCTGCCTCCCGGAGAAGCACCCG TCGCCCCGACGGCACCGCAAAGCGAGTCGAGCCAGTATCTGAACCTCCAA ATGTCGTTTTGTTTGAAGACTCCAGGAAGTGTGCTCTAGCGTTAGGTTTT TTTAATGCTGTGTATTTGGTGTAAAGAAGAAAGCGTCTCGTTTAAATTTG AGCTGTTGGCGGGATGCTGATGCGCTCTTGCCCCTGCCGTCACTTTGTTG TTGGTTGCCGGTTGTCATTACGGCTGCCGTCCGCCTCTTTTCAGGTGTTT GAACAAGGGGTGTCAGAGGGATTTCGTTGTGGCAGAAAACAATCCAGCTG CGTGCAGGTGAGAGAAGATCGGTAAACCTCTAGCATGAACAACATCAGGT TTTTTTGCGATACAGGCTCTCGCAGTTTGTAGCGTCTATGTCGTTAGTAT CTGTAGACGCGCGCTGTTCTATACCGGCGCAGCTGAAGCACGTGCGAGTG AGAGCGGAGGCAACTCCCTTCTGAGACGGGGGGCATCGTGGCCCTAGCTG CACTAGTGGCGGGGCGCAACTGATGCGCAACAGGCAGCGCACGTCACCAA TTACAATCCCTTTCCGTTTTCGTCTCGCTACTTCCGTCTTTTTGTTCGTC CGTCCACGACCTTTCTTTCCCTTGGCCCTCCGCCCCACCTGACACAACGT GACCGATTTCTTCGCCTGCCTGCCTGCCCCTGCACCGGCACCTTCCGGCG CCCGTCCGCTTGCGGCGCTGTGCCGCCCGGCGCGCGATGCTTTCCTCGCC CGCGCAGGCACCACACGAAGCCACCAGTGTTCCACGACACCGGCAAGTAC TGGGCCTGCTGCCCCGGCACGGTCAAGTACGACTTCGACGACTTTGTCAC CATCCCAGGCTGCACCGTCGGCTCCCACGACGACGGCGAGCAGCAGCCGG CGGAAGCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig2010:2943..6103-

>mRNA_P-wetherbeei_contig2010.3.1 ID=mRNA_P-wetherbeei_contig2010.3.1|Name=mRNA_P-wetherbeei_contig2010.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1029bp|location=Sequence derived from alignment at P-wetherbeei_contig2010:2943..6103- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGTCTACCTGCACTATGAGGAAGGAGAGGACACCAAGCGCCACAT
GACGCTGAAGCTTACGCTTCCTCGCAAGTGGGACGGCGACTCACCGGTCC
GAGTACTAGAACTGTTCGTGGAGGCTTACAATAAGAGGAAGCCGGACACG
CCGCTGGACTTGGAAAATGTGCACATGGAAGCGAACGGGGTGACGCTGAC
CAAGGCGGACACCATCGGCGAGAGCATGGTCGACCGGGGCGATGTTTTGG
TGGCGCGGGGTCCGACGCCGGAGGGGAGCCCCAAGCCATTGCGTGCCTGT
AAGGCCGCTCTAACGCCGACTTTCACCCAATCTGTGGGTTTCCACTGTCG
GCCGCACTTCCCAGCAACTGTGGCCGGGATGGCCGGCGACGACGGGCTGT
CGCGGTGCCGGAACTACGGCTGCAACAAGCGCTATGCAGAGGCGGAGAAC
AGCCGCGAGGCGTGCCTGCACCACACGGCGCCGCCGCTGTTCCACGACAC
CAAGAAGGGGTGGAGCTGCTGCGAGAAGCGCGTCTATGACTGGGACGAAT
TCCAGGCCATCCCAGGGTGCACCCGCGGGCCCCACAGCACCGTGGACCCA
AAAGAGCTCTTCGCGGCGTCTCCGAACGCCGTCAGCCCCGGCGAGGACGC
AGCGGCCGGCCCCCCGGCAGAGGTGCCGGTGGTCCCGGCGGTGCGGTCGA
TTGAGGACTTCAACACCTCCAACCCCGACGCCACCACGGCGGCGGCGGCG
GCCGTCAACAGCATGGCGGCTGCCTCCCGGAGAAGCACCCGTCGCCCCGA
CGGCACCGCAAAGCGAGTCGAGCCAGGGTGTCAGAGGGATTTCGTTGTGG
CAGAAAACAATCCAGCTGCGTGCAGGCACCACACGAAGCCACCAGTGTTC
CACGACACCGGCAAGTACTGGGCCTGCTGCCCCGGCACGGTCAAGTACGA
CTTCGACGACTTTGTCACCATCCCAGGCTGCACCGTCGGCTCCCACGACG
ACGGCGAGCAGCAGCCGGCGGAAGCCTGA
back to top