prot_P-wetherbeei_contig20086.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20086.2.1
Unique Nameprot_P-wetherbeei_contig20086.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length79
Homology
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BLAST of mRNA_P-wetherbeei_contig20086.2.1 vs. uniprot
Match: UPI0019857874 (AAA family ATPase n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019857874)

HSP 1 Score: 127 bits (319), Expect = 1.970e-32
Identity = 62/79 (78.48%), Postives = 73/79 (92.41%), Query Frame = 0 
Query:    1 MVAECEAQIARIGNDKLYIGHGRALLGTIAIRRGQFERAHELLVDSLAMYRAVESNFDIAGSLAQQGFLALRRKDPAQA 79
            MVAECE +IA+IG+DKLYIGHGRALLGTIAIRRG F+RA++LL +SL +YRAVES FDIAGSLAQQGFLALR+ +PA+A
Sbjct:  526 MVAECEVEIAKIGSDKLYIGHGRALLGTIAIRRGDFQRANQLLTESLDLYRAVESKFDIAGSLAQQGFLALRQNEPARA 604
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BLAST of mRNA_P-wetherbeei_contig20086.2.1 vs. uniprot
Match: UPI0019B66E1F (Winged helix-turn-helix domain-containing protein n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI0019B66E1F)

HSP 1 Score: 113 bits (282), Expect = 2.140e-27
Identity = 55/67 (82.09%), Postives = 62/67 (92.54%), Query Frame = 0 
Query:    1 MVAECEAQIARIGNDKLYIGHGRALLGTIAIRRGQFERAHELLVDSLAMYRAVESNFDIAGSLAQQG 67
            MVAECEA++A+IG DKLYIGHGRALLGTIAIRRG FERA +LL +SLA+YR+VES FDIAGSLAQQG
Sbjct:  675 MVAECEAEMAKIGGDKLYIGHGRALLGTIAIRRGHFERASQLLTESLALYRSVESKFDIAGSLAQQG 741
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BLAST of mRNA_P-wetherbeei_contig20086.2.1 vs. uniprot
Match: UPI0019939AA6 (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI0019939AA6)

HSP 1 Score: 81.6 bits (200), Expect = 8.610e-18
Identity = 38/79 (48.10%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:    1 MVAECEAQIARIGNDKLYIGHGRALLGTIAIRRGQFERAHELLVDSLAMYRAVESNFDIAGSLAQQGFLALRRKDPAQA 79
            ++ +CE +   +G D LY+GH  AL G IA+RRG  +RA+++  D L +YR ++S FD+AG L+QQG LALRR   A A
Sbjct:   31 LLRDCETETQVLGGDPLYLGHCCALRGNIAVRRGDLDRANDMPADGLLLYRKIDSQFDVAGILSQQGLLALRRGGAAAA 109
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20086.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI00198578741.970e-3278.48AAA family ATPase n=1 Tax=Rhodoferax sp. TaxID=504... [more]
UPI0019B66E1F2.140e-2782.09Winged helix-turn-helix domain-containing protein ... [more]
UPI0019939AA68.610e-1848.10Uncharacterized protein n=1 Tax=Chitinophagaceae b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 3..79
e-value: 2.9E-6
score: 28.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20086contigP-wetherbeei_contig20086:935..1171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20086.2.1mRNA_P-wetherbeei_contig20086.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20086 935..1171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20086.2.1 ID=prot_P-wetherbeei_contig20086.2.1|Name=mRNA_P-wetherbeei_contig20086.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
MVAECEAQIARIGNDKLYIGHGRALLGTIAIRRGQFERAHELLVDSLAMY
RAVESNFDIAGSLAQQGFLALRRKDPAQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf