mRNA_P-wetherbeei_contig20083.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536Y253_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y253_9PROT) HSP 1 Score: 447 bits (1149), Expect = 4.180e-153 Identity = 253/338 (74.85%), Postives = 288/338 (85.21%), Query Frame = 1
Query: 4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDAAAS 1017
PVVA A DVNVYL+GLGTVTPLKTVTVRSRVDG+L++VLF+EGQ V+EG+LLAEIDPRP+QA LMQ+EGQMARDQALLANARID +RYR L AQDSIAKQ VDTQEALVXXXXXXXXXXXXXXXXXX TYSR+TAPI GRLGLR VD GNIVRS DANGLVVITQLQP+T I+TI QDNL V++R++SGER+PV+A+DR+QK KLASGTL +VDNQID TGT+KLKAQF N+DA LFPNQFVNVRML+DTR T VP+AA+ RG +G FVYVVKEDRTV LR V G AE D +ESG+ PGELVV +G DRLR+GAKVE+P + A A+
Sbjct: 84 PVVAAAARTGDVNVYLSGLGTVTPLKTVTVRSRVDGELVKVLFKEGQAVKEGDLLAEIDPRPYQAQLMQFEGQMARDQALLANARIDFERYRTLYAQDSIAKQQVDTQEALVXXXXXXXXXXXXXXXXXXLQVTYSRITAPISGRLGLRLVDPGNIVRSGDANGLVVITQLQPITAIFTIPQDNLPNVMQRLRSGERLPVEAYDREQKKKLASGTLTSVDNQIDPATGTIKLKAQFPNEDASLFPNQFVNVRMLLDTRRGATLVPNAAVVRGGQGTFVYVVKEDRTVELRKVSVGVAEGDGLSVESGLAPGELVVVEGSDRLRDGAKVEIPDRAARAA 421
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536YP86_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YP86_9PROT) HSP 1 Score: 444 bits (1141), Expect = 5.970e-152 Identity = 234/343 (68.22%), Postives = 275/343 (80.17%), Query Frame = 1
Query: 4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDA-AASGKGG 1029
P++A A DVN+YL+GLGTVTPLKTVTVRSRVDG+L+RVLF+EGQ+V+EG+LLAEIDPRP+QA L Q+ GQMARDQALLANARIDL+RYR L QDSIAKQ VDTQEALV Y+R+TAP+ GRLGLR VD GNIVRS DANGLVVITQLQP+TV++TI QDNL +++R++SGER+PV+A+DR QKVKLASG LLTVDNQID +TGTVKLKAQF N+DA LFPNQFVNVRML+DTR + T VP+A++ RG +G FVYVVKEDRTV LR V G AE D +ESG+ PGELVV +G DRLR+GAKVE+P + A AA GKGG
Sbjct: 79 PILAAAARTGDVNIYLSGLGTVTPLKTVTVRSRVDGELVRVLFKEGQVVKEGDLLAEIDPRPYQAQLAQFGGQMARDQALLANARIDLERYRTLYTQDSIAKQQVDTQEALVRQYEGTVKADQGQVDNVRLQLAYARITAPVGGRLGLRLVDPGNIVRSGDANGLVVITQLQPITVVFTIPQDNLPSLMQRLRSGERLPVEAYDRQQKVKLASGALLTVDNQIDPSTGTVKLKAQFPNEDAGLFPNQFVNVRMLLDTRRDATLVPNASVVRGGQGTFVYVVKEDRTVELRKVSVGMAEGDDLSVESGLAPGELVVVEGSDRLRDGAKVEIPDRAASAAPGKGG 421
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536SPX7_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SPX7_9PROT) HSP 1 Score: 433 bits (1114), Expect = 4.170e-148 Identity = 242/338 (71.60%), Postives = 284/338 (84.02%), Query Frame = 1
Query: 4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDAAAS 1017
PVVA A +N+YL GLGTVTPLKTVTVRSRVDG+L++V FREGQ+V EG+LLAEIDPRP+QA L Q+EGQMARDQALLANARID++RYR L AQDSIAKQ VDTQEALV XXXXXXXXXXXXXXXXX TYSR+TAP GRLGLR VD GNIVR+ DANGLVVITQLQP+T I+TI QD+L V++R++SGE++PVDA+DR+QK KLA+GTLL+VDNQID TGT++LKAQF N D LFPNQFVNVRML+DTR E T VP+AA+ RG +G FVYV+ EDRTV LR V G AE D+ +ESG+ PGELVV +G DRLR+GAKVE+P + A+A+
Sbjct: 62 PVVAAAARSGAINIYLNGLGTVTPLKTVTVRSRVDGELVKVSFREGQVVTEGDLLAEIDPRPYQAQLTQFEGQMARDQALLANARIDVERYRTLYAQDSIAKQQVDTQEALVRXXXXXXXXXXXXXXXXXLQLTYSRITAPSSGRLGLRLVDAGNIVRAGDANGLVVITQLQPITAIFTIPQDSLPGVMQRLRSGEKLPVDAYDREQKKKLAAGTLLSVDNQIDPATGTIRLKAQFPNGDGNLFPNQFVNVRMLLDTRREATLVPNAAVVRGGQGTFVYVINEDRTVALRKVVAGMAEGDSVSVESGLAPGELVVVEGSDRLRDGAKVEIPDRAASAA 399
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: UPI000550EDE4 (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Herbaspirillum sp. RV1423 TaxID=1443993 RepID=UPI000550EDE4) HSP 1 Score: 410 bits (1053), Expect = 2.700e-137 Identity = 225/329 (68.39%), Postives = 272/329 (82.67%), Query Frame = 1
Query: 4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVE 990
PV A DV++YLTGLG VTP T TVRSRVDGQLM++ F+EGQLV+EG+LLAE+DPRP+Q A+ Q EGQ+ARDQALL+ A++DL RYR LL QDSIA Q VDTQ ALV XXXXXXXXXXXXXXXXX TYSRVTAP+ GRLGLRQVD+GNIV SSD NG+V+ITQ+QP+TV+++I +DN+ V+K++Q+G+++ DA+DRDQK KLA G LLT+DNQ+D TTGTVKLKAQF N D LFPNQFVN+RML+D R T +P+AA+QRG++GLFVYVVK D TVT+R+VKTGPA+ D T IE G+ GE VV DG+DRLREGAKVE
Sbjct: 88 PVGVAVARTSDVDIYLTGLGGVTPTATATVRSRVDGQLMKLHFKEGQLVKEGDLLAELDPRPYQVAVTQAEGQLARDQALLSAAQLDLKRYRTLLEQDSIASQQVDTQAALVKXXXXXXXXXXXXXXXXXLQLTYSRVTAPVSGRLGLRQVDIGNIVHSSDTNGIVIITQVQPITVVFSIPEDNIPAVMKQLQAGKKLATDAWDRDQKNKLAGGMLLTIDNQVDATTGTVKLKAQFPNTDYALFPNQFVNIRMLLDVRQGATVIPTAAIQRGSKGLFVYVVKSDNTVTVRNVKTGPAQGDITAIEDGVASGETVVVDGIDRLREGAKVE 416
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A5F0LAN9_9BURK (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=6 Tax=Herbaspirillum TaxID=963 RepID=A0A5F0LAN9_9BURK) HSP 1 Score: 409 bits (1050), Expect = 6.130e-137 Identity = 225/329 (68.39%), Postives = 273/329 (82.98%), Query Frame = 1
Query: 4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVE 990
PV A DVN+YLTGLG VTP T TVRSRVDGQLM++ F+EGQLV+EG+LLAE+D RP+Q A+ Q EGQ+ARDQA L A++DL RYR LL+QDSIA Q VDTQ ALV XXXXXXXXXXXXXXXXXX TYSRVTAP+ GRLGLRQVD+GNIV SSD NG+V+ITQ+QP+T +++I +DN+ V+K++Q+G+++ DA+DRDQK KLASG LLT+DNQ+D TTGT+KLKAQF N D LFPNQFVN+RML+DTR + T+P+AALQRG++GLF+YVVK D TVT+R+VKTGPA+ D T IE G+ GE VV DG+DRLREGAKVE
Sbjct: 66 PVGVAVAKISDVNIYLTGLGGVTPTATATVRSRVDGQLMKLHFKEGQLVKEGDLLAELDARPYQVAVTQAEGQLARDQAQLGAAQLDLKRYRTLLSQDSIAGQQVDTQAALVKXXXXXXXXXXXXXXXXXXQLTYSRVTAPVSGRLGLRQVDIGNIVHSSDTNGIVIITQVQPITAVFSIPEDNIPAVMKQLQAGKKLATDAWDRDQKNKLASGVLLTIDNQVDATTGTIKLKAQFPNTDYALFPNQFVNIRMLLDTRKDAITIPTAALQRGSKGLFIYVVKSDNTVTVRNVKTGPAQGDITAIEDGVASGETVVVDGIDRLREGAKVE 394
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536ZKP7_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZKP7_9PROT) HSP 1 Score: 405 bits (1040), Expect = 1.070e-136 Identity = 214/336 (63.69%), Postives = 258/336 (76.79%), Query Frame = 1
Query: 1 MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDA 1008
+PVVA PA + ++VYL+ LGTVTP VTVRSRVDGQLM+V FREGQLV+ GELLAEIDPRPF+ L Q +GQ+A+DQALL NA++DL+RYR LL+QDSI+KQ VDTQE+LV YSRVTAPI G +GLRQVD GNI+ +SD +GLVVITQLQP+TVI+ I +DNL V+ R++SG V VDA+DR QK KLA+G LLT DNQIDTTTGTVKL+A+FANDD+ LFPNQFVNVRM +TRT T VPSAA+ RGA G FVY+VK+D +VT+ VK GP + + T IESGI PG+LVV DG D+LREGAKVEL + +A
Sbjct: 69 LPVVAAPARQGSIDVYLSALGTVTPRNMVTVRSRVDGQLMQVAFREGQLVKTGELLAEIDPRPFEVQLTQAQGQLAKDQALLKNAQLDLERYRTLLSQDSISKQQVDTQESLVRQYEGTVKADQGQVDNAKLQLVYSRVTAPISGVVGLRQVDPGNIIHASDTSGLVVITQLQPITVIFPIPEDNLPQVVARLKSGTPVSVDAWDRAQKTKLATGKLLTFDNQIDTTTGTVKLRAEFANDDSALFPNQFVNVRMAAETRTGATLVPSAAVLRGAPGTFVYLVKDDHSVTVAPVKLGPVQGETTAIESGIAPGDLVVVDGTDKLREGAKVELITPEA 404
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: J3DB21_9BURK (RND family efflux transporter, MFP subunit n=3 Tax=Herbaspirillum TaxID=963 RepID=J3DB21_9BURK) HSP 1 Score: 406 bits (1044), Expect = 1.090e-135 Identity = 208/329 (63.22%), Postives = 255/329 (77.51%), Query Frame = 1
Query: 4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVE 990
PV A DVNVYLTGLG VTP T TVRSRVDGQLM++ F+EGQLV++G+LLAE+D RP++ A+ Q EGQ+ARDQALL A++DL RYR LLAQDSIA Q VDTQ ALV TYSRVTAP+ GR GLRQVD+GNIV SSD +G+V+ITQ+QP+T I++I +DN+ V+K++Q+G+++ DA+DR+QK KLASGTLLT+DNQ+D TTGTVKLKAQF N D LFPNQFVN+RML+DTR T +PSAA+QRG++GLFVYVVK+D +VT+R+VKTGP E D T IE G+ GE VV DG+DRLREGAKVE
Sbjct: 90 PVGVALAKTADVNVYLTGLGGVTPTATATVRSRVDGQLMKLHFKEGQLVKQGDLLAELDARPYEVAVTQAEGQLARDQALLNAAQLDLKRYRTLLAQDSIASQQVDTQAALVKQYEGTVKSDQGNLASARLQLTYSRVTAPVSGRTGLRQVDIGNIVHSSDTSGIVIITQVQPITTIFSIPEDNIPAVMKQLQAGKKLATDAWDREQKNKLASGTLLTIDNQVDATTGTVKLKAQFPNTDFALFPNQFVNIRMLLDTRQGATVIPSAAIQRGSKGLFVYVVKQDNSVTVRNVKTGPTEGDVTAIEDGVASGETVVVDGIDRLREGAKVE 418
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536TEE1_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TEE1_9PROT) HSP 1 Score: 400 bits (1027), Expect = 9.350e-135 Identity = 209/331 (63.14%), Postives = 253/331 (76.44%), Query Frame = 1
Query: 1 MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVEL 993
+PVVA PA + ++VY+ LGTVTP VTV SRVDGQL+R+ FREGQ+VR GELLAEIDPRPF+ L Q +G MARDQALL NA++DL+RYR LL+QDSI+KQ VDTQE+LV TY+RVTAPI G +GLRQVD GNIV +SD NGLVVITQLQP+TVI+ I +DNL V++R+++G + VDA+DR QKVKLA+G LLT DNQIDTTTGTVKL+A+F NDD+ LFPNQFVNVRM + R T VPSAA+ RGA G FVY+VK+DR+VT+ VK GP + + T IESG+ PG+LVV DG D+LREGAKVEL
Sbjct: 68 LPVVAAPARQGSIDVYINALGTVTPRNMVTVHSRVDGQLIRIAFREGQVVRAGELLAEIDPRPFEVQLTQAQGLMARDQALLKNAQLDLERYRTLLSQDSISKQQVDTQESLVRQYEGAVKNDQGQIDNARLQLTYARVTAPIGGVVGLRQVDAGNIVHASDTNGLVVITQLQPITVIFPIPEDNLPQVVQRLKAGNPIAVDAWDRAQKVKLATGKLLTFDNQIDTTTGTVKLRAEFPNDDSALFPNQFVNVRMAAEPRAGATLVPSAAVLRGAPGTFVYLVKDDRSVTVAPVKLGPVQGETTAIESGVAPGDLVVVDGTDKLREGAKVEL 398
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A1F3ZTS7_9PROT (Biotin_lipoyl_2 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZTS7_9PROT) HSP 1 Score: 401 bits (1030), Expect = 2.120e-134 Identity = 205/333 (61.56%), Postives = 254/333 (76.28%), Query Frame = 1
Query: 4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSK 1002
PVVA A K DV++++ GLGTVTPL+TVTVRSRV+GQLMRV F+EGQ+V++G+LLAEIDPRPF+ Q +GQ+ RDQALLANAR+DL+RYR LLAQDSIAKQ VD+QEALV TYSR+TAPI GR GLR +D GNIVR DA G+VVITQ P+ V++T+ QD L V+KR+QSG+++ V+A+DR+QK +LASG L VDN +DTTTGTVKLKA FANDD LFPNQFVNVRM ++T + T +PSAA+QRG +G+FVYVVK+D TVT R VK GP + I +GI+PGE VV DG+DRLREGA+V+L +
Sbjct: 79 PVVAANARKGDVDIFINGLGTVTPLRTVTVRSRVEGQLMRVHFQEGQVVKDGQLLAEIDPRPFEVQFKQADGQLVRDQALLANARLDLERYRTLLAQDSIAKQQVDSQEALVRQYEGVVRSDQSQVDSARLQLTYSRITAPIAGRTGLRLIDPGNIVRGGDATGIVVITQTTPIAVLFTVPQDALPAVIKRVQSGDKLQVEAWDREQKARLASGALTAVDNLVDTTTGTVKLKASFANDDGALFPNQFVNVRMKLETASGQTVIPSAAIQRGGQGMFVYVVKDDDTVTARPVKLGPIDGQRVAIAAGIKPGERVVVDGIDRLREGARVQLTKR 411
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: UPI001BBE4699 (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BBE4699) HSP 1 Score: 398 bits (1022), Expect = 3.250e-134 Identity = 203/324 (62.65%), Postives = 247/324 (76.23%), Query Frame = 1
Query: 1 MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLR 972
+PVVA P K D+ VYL GLGTV P VTVR+RVDGQLM+V F+EGQ+V+ G LLAEIDPRPFQ L Q EGQMARDQALL NARID +RYR L+AQDSIA+Q +DTQEALV Y+R+TAP GR+GLRQVD GNIVR+SDANGLVVI QLQP TV++T+ +D+L ++KR+Q G +PV+AFDR+QK+KLA+G LLT DNQIDT TGT++LKA F NDDA LFPNQFVN RML DTR +V P+AA+QRG G FVYVV++D+TVT+R VK GPA+ ++ IE G++PGE VV DG+D+LR
Sbjct: 55 IPVVAAPIGKGDIGVYLNGLGTVVPRNVVTVRARVDGQLMQVYFQEGQMVKAGTLLAEIDPRPFQVQLTQAEGQMARDQALLQNARIDAERYRTLVAQDSIARQQLDTQEALVRQYEGAVKTDQGQIDNAKLQLVYTRITAPFSGRVGLRQVDPGNIVRASDANGLVVIAQLQPATVVFTLPEDSLPKLMKRIQGGAALPVEAFDREQKIKLAAGKLLTTDNQIDTATGTIRLKAVFPNDDAALFPNQFVNARMLSDTRKDVVLAPTAAIQRGVPGTFVYVVQQDKTVTVRPVKLGPADGESIAIEEGLQPGEQVVIDGVDKLR 378 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20083.1.1 >prot_P-wetherbeei_contig20083.1.1 ID=prot_P-wetherbeei_contig20083.1.1|Name=mRNA_P-wetherbeei_contig20083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=359bp MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVback to top mRNA from alignment at P-wetherbeei_contig20083:167..1243- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20083.1.1 ID=mRNA_P-wetherbeei_contig20083.1.1|Name=mRNA_P-wetherbeei_contig20083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig20083:167..1243- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20083:167..1243- >mRNA_P-wetherbeei_contig20083.1.1 ID=mRNA_P-wetherbeei_contig20083.1.1|Name=mRNA_P-wetherbeei_contig20083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig20083:167..1243- (Phaeothamnion wetherbeei SAG_119_79)back to top |