prot_P-wetherbeei_contig20064.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20064.1.1
Unique Nameprot_P-wetherbeei_contig20064.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length118
Homology
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: D8LIP7_ECTSI (DEAD box helicase DEAD/DEAH box helicase-like protein (Partial) (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIP7_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.700e-43
Identity = 78/116 (67.24%), Postives = 97/116 (83.62%), Query Frame = 0
Query:    3 LFSGGGRPQPATGRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            LFS G     A GR P+AI +APTRELAKQVEREF RIAP +++LA+YGGT QGPQ+G +RRGVD++VGTPGR+IDH++QG+L+L E++F VLDEAD+MLQMGFQE VE I K +P
Sbjct:  268 LFSRG-----AYGRFPRAICVAPTRELAKQVEREFNRIAPELSSLAVYGGTAQGPQIGEMRRGVDIIVGTPGRIIDHIEQGNLNLSEIQFCVLDEADLMLQMGFQEPVEEIFKEMP 378          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: A0A6L2KYC5_TANCI (DEAD-box ATP-dependent RNA helicase 53-like n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2KYC5_TANCI)

HSP 1 Score: 144 bits (364), Expect = 3.000e-38
Identity = 73/104 (70.19%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   15 GRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            GR PQAIVLAPTRELAKQVE+EF   APN++TL +YGG P   Q+  L  GVDV+VGTPGRVID L++GSL+L EV+FAVLDEAD ML +GF +DVETIL+YLP
Sbjct:  168 GRNPQAIVLAPTRELAKQVEKEFHEAAPNLSTLCVYGGVPIQRQMSTLDYGVDVLVGTPGRVIDLLKRGSLNLSEVQFAVLDEADQMLNVGFADDVETILEYLP 271          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: A0A5N6PQA3_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PQA3_9ASTR)

HSP 1 Score: 143 bits (361), Expect = 6.650e-38
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   15 GRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            GR P AIV+APTRELA+QVE+EF   APN+ TL +YGG+P   Q+  L RGVDV+VGTPGRVID L++G+L+L EVKFAVLDEAD ML +GF EDVETIL+YLP
Sbjct:  172 GRNPLAIVMAPTRELARQVEKEFYESAPNLDTLCVYGGSPIQRQMSTLDRGVDVIVGTPGRVIDLLKRGALNLSEVKFAVLDEADQMLNVGFAEDVETILEYLP 275          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: A0A5N6LLE5_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LLE5_9ASTR)

HSP 1 Score: 144 bits (362), Expect = 7.040e-38
Identity = 72/104 (69.23%), Postives = 87/104 (83.65%), Query Frame = 0
Query:   15 GRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            GR P AIV+APTRELA+QVE+EF   APN+ TL +YGG+P   Q+ +L RGVDV+VGTPGRVID L++G+L+L EVKFAVLDEAD ML +GF EDVETIL+YLP
Sbjct:  169 GRNPLAIVMAPTRELARQVEKEFYESAPNLDTLCVYGGSPIQRQMSSLDRGVDVIVGTPGRVIDLLKRGALNLSEVKFAVLDEADQMLNVGFAEDVETILEYLP 272          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: F2D6U8_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2D6U8_HORVV)

HSP 1 Score: 136 bits (342), Expect = 9.100e-38
Identity = 68/107 (63.55%), Postives = 82/107 (76.64%), Query Frame = 0
Query:   12 PATGRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            P  GR P+A+VLAPTRELAKQVE+E    AP ++T+ +YGG     Q  AL RGVDVVVGTPGR+ID +  GSL LGEV++ VLDEAD ML +GF+EDVETIL+ LP
Sbjct:   61 PGRGRIPRALVLAPTRELAKQVEKEIMESAPKLSTVCVYGGVSYNTQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETILQQLP 167          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: UPI000B8F8E37 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F8E37)

HSP 1 Score: 143 bits (361), Expect = 9.520e-38
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   15 GRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            GR P AIV+APTRELA+QVE+EF   APN+ TL +YGG+P   Q+  L RGVDV+VGTPGRVID L++G+L+L EVKFAVLDEAD ML +GF EDVETIL+YLP
Sbjct:  172 GRNPLAIVMAPTRELARQVEKEFYESAPNLDTLCVYGGSPIQRQMSTLDRGVDVIVGTPGRVIDLLKRGALNLSEVKFAVLDEADQMLNVGFAEDVETILEYLP 275          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: A0A5K1DCE7_9MAGN (Helicase ATP-binding domain-containing protein (Fragment) n=10 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1DCE7_9MAGN)

HSP 1 Score: 133 bits (334), Expect = 1.040e-37
Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 0
Query:   14 TGRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            +GR P+A+VLAPTRELA+QVE+E Q  AP + T+ +YGG     Q  AL RGVDVVVGTPGR+ID +  GSL LGEVK+ VLDEAD ML +GF+EDVE IL+ LP
Sbjct:    2 SGRLPRALVLAPTRELARQVEKEIQESAPYLKTVCVYGGVSYNVQQNALTRGVDVVVGTPGRLIDLINSGSLQLGEVKYLVLDEADQMLAVGFEEDVEVILEKLP 106          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: A0A251UNT7_HELAN (Putative helicase Cas3, CRISPR-associated, core n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UNT7_HELAN)

HSP 1 Score: 143 bits (361), Expect = 1.080e-37
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   15 GRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            GR P AIV+APTRELA+QVE+EF   APN+ TL +YGG+P   Q+  L RGVDV+VGTPGRVID L++G+L+L EVKFAVLDEAD ML +GF EDVETIL+YLP
Sbjct:  172 GRNPLAIVMAPTRELARQVEKEFYESAPNLDTLCVYGGSPIQRQMSTLDRGVDVIVGTPGRVIDLLKRGALNLSEVKFAVLDEADQMLNVGFAEDVETILEYLP 275          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: A0A103XTH7_CYNCS (DNA/RNA helicase, DEAD/DEAH box type, N-terminal n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XTH7_CYNCS)

HSP 1 Score: 143 bits (360), Expect = 1.400e-37
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   15 GRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            GR P AIVLAPTRELA+QVE+EF   APN+ TL +YGG+P   Q+  L RGVDV+VGTPGRVID L++G+L+L EVKFAVLDEAD ML +GF +DVETIL+YLP
Sbjct:  172 GRNPLAIVLAPTRELARQVEKEFYESAPNLDTLCVYGGSPIQRQMSTLDRGVDVIVGTPGRVIDLLKRGALNLSEVKFAVLDEADQMLNVGFADDVETILEYLP 275          
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Match: A0A251S007_HELAN (Putative DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251S007_HELAN)

HSP 1 Score: 142 bits (358), Expect = 1.930e-37
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 0
Query:   15 GRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMYGGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADMMLQMGFQEDVETILKYLP 118
            GR P AIV+APTRELAKQVE+EF   APN+ATL +YGG+P   Q+  L RGVDV+VGTPGRVID L++G+L+L EV+FAVLDEAD ML +GF E VETIL+YLP
Sbjct:  173 GRNPLAIVMAPTRELAKQVEKEFYESAPNLATLCVYGGSPIQRQMSTLDRGVDVIVGTPGRVIDLLKRGALNLSEVQFAVLDEADQMLNVGFAEAVETILEYLP 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20064.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIP7_ECTSI1.700e-4367.24DEAD box helicase DEAD/DEAH box helicase-like prot... [more]
A0A6L2KYC5_TANCI3.000e-3870.19DEAD-box ATP-dependent RNA helicase 53-like n=1 Ta... [more]
A0A5N6PQA3_9ASTR6.650e-3869.23Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A5N6LLE5_9ASTR7.040e-3869.23Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
F2D6U8_HORVV9.100e-3863.55Predicted protein n=1 Tax=Hordeum vulgare subsp. v... [more]
UPI000B8F8E379.520e-3869.23DEAD-box ATP-dependent RNA helicase 53, mitochondr... [more]
A0A5K1DCE7_9MAGN1.040e-3763.81Helicase ATP-binding domain-containing protein (Fr... [more]
A0A251UNT7_HELAN1.080e-3769.23Putative helicase Cas3, CRISPR-associated, core n=... [more]
A0A103XTH7_CYNCS1.400e-3769.23DNA/RNA helicase, DEAD/DEAH box type, N-terminal n... [more]
A0A251S007_HELAN1.930e-3769.23Putative DEAD-box ATP-dependent RNA helicase 53 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 16..117
e-value: 1.9E-28
score: 99.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 7..118
e-value: 4.8E-39
score: 135.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..118
NoneNo IPR availablePANTHERPTHR47958:SF99DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-LIKEcoord: 12..118
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 12..118
NoneNo IPR availableCDDcd00268DEADccoord: 15..118
e-value: 2.55899E-53
score: 163.767
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..118
score: 18.54438

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20064contigP-wetherbeei_contig20064:22..915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20064.1.1mRNA_P-wetherbeei_contig20064.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20064 22..915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20064.1.1 ID=prot_P-wetherbeei_contig20064.1.1|Name=mRNA_P-wetherbeei_contig20064.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
GGLFSGGGRPQPATGRAPQAIVLAPTRELAKQVEREFQRIAPNVATLAMY
GGTPQGPQLGALRRGVDVVVGTPGRVIDHLQQGSLHLGEVKFAVLDEADM
MLQMGFQEDVETILKYLP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd