mRNA_P-wetherbeei_contig2006.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2006.5.1
Unique NamemRNA_P-wetherbeei_contig2006.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: D7G378_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G378_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.080e-81
Identity = 141/255 (55.29%), Postives = 180/255 (70.59%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPVG-----ILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            DVLD+ H+ ++ +V+NKAL+NR+F+E G KEL+FIERSG  FGFLFG  QT  W+FY E WVLPVG      LTN+LALK+IF+PV    VCGL   QGLFL RQTEVSA FA+I + E+L S+ +W+A    P    F + C+ H + F+D MAG +RPLV   +G+ EF  +KD IA ++  + L    R+ + YT ++LD+  T+RVAMQ LS  EFEGVLHPVFEEDE KLI+VG ALGAAVGV QL  +F
Sbjct:  244 DVLDVHHMVITNLVKNKALMNRVFMEVGAKELVFIERSGLLFGFLFGCLQTCLWYFYQENWVLPVGGLVVGWLTNYLALKMIFRPVNERIVCGL-KLQGLFLKRQTEVSAHFAEITSNEILTSQAMWEAILTGPKRDSFNDMCKRHTHNFVDDMAGSMRPLVQHMIGENEFVGLKDEIAQQMIEN-LPMAIRFGHTYTTKALDMSNTIRVAMQGLSPAEFEGVLHPVFEEDEWKLILVGAALGAAVGVFQLFVLF 496          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S2SNZ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNZ7_9STRA)

HSP 1 Score: 255 bits (652), Expect = 5.120e-80
Identity = 135/252 (53.57%), Postives = 174/252 (69.05%), Query Frame = 1
Query:   10 DITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            D+ H+ V+ MV+NK LLN++F++CG+KEL FIERSGFYFGFLFG+ Q   W+FY   WVLP     VG  TNWLALK+IFQP+EPV++ G FT  GLFL RQ EVS  FAKIN+ E+L  + +WQ+    P    F+     HV+ F+D M G L+ ++    G+  F  +KD IA +I    L    + +  YT+++LD+E T+R AMQ+LSSKEFEGVLHPVFEEDELKLI+VG  LG AVGV QL  +F
Sbjct:  172 DLKHMVVTNMVKNKGLLNKVFMDCGEKELKFIERSGFYFGFLFGVGQAFWWYFYQASWVLPACGFIVGYATNWLALKVIFQPIEPVKL-GCFTLHGLFLRRQKEVSVLFAKINSTEILTPQAMWQSILHGPKKDAFQAAMVKHVHKFVDDMVGKLKFILDGLWGEVHFLAMKDEIARKIIEQ-LPAHIQLSYDYTEEALDMERTIREAMQSLSSKEFEGVLHPVFEEDELKLIIVGAMLGLAVGVFQLLVLF 421          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7R9WC17_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WC17_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.550e-75
Identity = 127/255 (49.80%), Postives = 167/255 (65.49%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            DVLDI  + V+  V+NK L+N++F ECG KE  FI RSGFYFGFLFG  Q + W+FY   W+LPV     G  TNWLALK+IF+P+EP + C  FT  G+FL RQ EVS  FA++N  E+L+++ +W A    PLS  F    R H  VF + M G L+P+ +A +G +EF  +K+ IA +I    L      + +Y  ++LD+E T+R  MQ+LS  EFEGVLHP FEEDE+ LI VGG LGA VGV+QL  +F
Sbjct:   23 DVLDIKQMTVAACVKNKPLVNKIFKECGDKEFDFIRRSGFYFGFLFGCLQMVIWFFYNGSWILPVFGFLVGWTTNWLALKVIFRPLEPKKFC-CFTIHGIFLKRQMEVSETFARVNCVEILHTKAIWDAILTGPLSRNFFAMLRAHTIVFTENMVGGLKPVAIAAMGAQEFARMKEDIATKIAQK-LPTIIDQSYEYMTEALDMENTIRQKMQDLSYSEFEGVLHPAFEEDEIILIFVGGVLGALVGVIQLFALF 275          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S2EBD3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBD3_TRICV)

HSP 1 Score: 239 bits (611), Expect = 7.010e-74
Identity = 130/255 (50.98%), Postives = 168/255 (65.88%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            DVLDI ++ VS  VENK L+N++F ECG KE  FI+RSGFYFGFLFG  Q + W+FY   W+LPV     G  TN+LALK+IF+P+EP +V G FT QG+FL RQ EVS  FA++N  E+L++  +W A    PLS  F    R H  VF + M G L+P+ VA +G  +F  +K+ IAA+I    L      + +Y  ++LD+E T+R  MQ LS  EFEGVLHP FEEDE+ LI VGG LG  VGV+QL  +F
Sbjct:  157 DVLDIKNMTVSACVENKPLVNKIFQECGDKEFAFIKRSGFYFGFLFGCVQMVIWFFYNASWILPVFGFLVGWCTNYLALKVIFRPLEPTKV-GPFTVQGIFLKRQREVSETFARVNCVEILHTRAIWDAILTGPLSPNFYAMLRAHSIVFTEDMVGKLKPVAVAAMGAAKFSRMKEDIAAKIAER-LPTIIDQSYEYMTEALDMERTIREKMQELSPAEFEGVLHPAFEEDEITLIFVGGVLGCIVGVIQLFALF 409          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: B8C8A7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8A7_THAPS)

HSP 1 Score: 231 bits (590), Expect = 8.200e-71
Identity = 120/255 (47.06%), Postives = 166/255 (65.10%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            D+LDI  + V+  VENK L+N++F ECG+KE IFI RSGFYFGFLFGL Q   ++ Y   WVLP     VG  TNW+ALK+IF+P+ P ++ G FT  G+FL RQ EVS  FA++N  E+L+++ +W+     PLS  F    R H  VF + + G ++PL V  +G ++F E+K+ IA +I  + L     ++ +YT ++LD+E T+R  MQ LS  EFEGVLHP FEEDE+ LI VGG LG   G +Q+   +
Sbjct:  161 DILDIKQMTVAACVENKVLVNKIFQECGEKEFIFIRRSGFYFGFLFGLLQMGVFFIYDASWVLPFFGFLVGWATNWVALKVIFRPLNPQKI-GPFTIHGIFLKRQKEVSETFARVNCVEILHTKAIWETILNGPLSSNFYAMLRAHSIVFTEKLVGGMKPLAVTAMGSQQFSEMKEEIAKKIAEN-LPIIMPHSYQYTTEALDMENTIRERMQKLSYPEFEGVLHPAFEEDEILLIFVGGVLGLIAGAIQVVIFY 413          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7R9WPM9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPM9_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.640e-70
Identity = 124/256 (48.44%), Postives = 169/256 (66.02%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSC-QARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            DV+DI  L V+  VENK LL ++F ECG KE IFI RSGFYFGFLFG+ Q   W FY  GW+LPV     G +TN++ALK+IFQP+EP ++   +T  G+FL RQ EVS  FA++   E+L+ + +W A     LS  F    R H  VF D M   ++PL +A +G ++F+++K+ IA ++         A Y  +YT ++LD+E T+RV M  LSS +FEGVLHP F+EDE++LI +GG LGAAVGV+QL  +F
Sbjct:  160 DVVDIKELCVNACVENKHLLVKIFQECGDKEFIFIRRSGFYFGFLFGVLQMTVWLFYDAGWILPVAGFLVGWVTNYIALKVIFQPLEPKQIL-CWTLHGIFLKRQVEVSETFARVICTEILHVKAMWDAIFTGRLSKNFFAMLRAHTLVFTDKMIAEIKPLAIAAMGADKFNQMKESIAQKVLEKIPDVIDASY--EYTQEALDMEATIRVKMAQLSSSDFEGVLHPAFQEDEIQLIALGGVLGAAVGVIQLFTLF 412          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S2LQF0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQF0_9STRA)

HSP 1 Score: 223 bits (567), Expect = 9.390e-68
Identity = 115/255 (45.10%), Postives = 164/255 (64.31%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQ---ARPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            DVLDI  + V+  V  K L+N++F ECG KE  FI RSGFYFGFLFGL Q   ++ Y   WVLP     VG  TNW+ALK+IF+P+ P+++ G F+  G+FL RQ EVS  FA++N  E+L+++ +W+   + P S  F    R H  VF + + G ++P+ +A +G ++F E+K+ IA +I     S    ++ +YT ++LD+E T+R  MQ L   EFEGVLHP FEEDE+ LI+VGG LG   G +Q+  M+
Sbjct:  128 DVLDIKQMTVAACVREKRLVNKIFQECGDKEFTFIRRSGFYFGFLFGLIQMGVFFVYDASWVLPFFGFLVGWATNWVALKVIFRPLNPIKI-GCFSLHGIFLKRQMEVSETFARVNCVEILHTKAIWEEILSGPKSKNFFAMLRAHSIVFTERLVGGMKPITIAAMGSQQFSEMKEEIAQKIADKLPSVMP-HSYEYTTEALDMENTIRERMQKLPYPEFEGVLHPAFEEDEILLILVGGLLGLVAGGIQVVAMY 380          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: K0RT03_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RT03_THAOC)

HSP 1 Score: 230 bits (587), Expect = 1.730e-67
Identity = 123/255 (48.24%), Postives = 165/255 (64.71%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            D+LDI  + V+  V  KAL+N++F ECG KE  FI  SGFYFG LFGL Q   ++ Y   W+LP     VG  TNWLALK+IF+P+EP ++ G FT  G+FL RQTEVS  FA++N  E+L+++ +W+     PLS  F    R H  VF + + G L+PL V  +G ++F E+K+ IA+EI    L     Y+ +YT  +LD+ETT+R  MQ LS +EFEGVLHP FEEDE+ LI+VGG LG   G LQ+   +
Sbjct:  466 DILDIKQMTVAACVREKALVNKIFQECGDKEFTFIRNSGFYFGGLFGLVQMGVFFVYDASWILPLFGFLVGWATNWLALKVIFRPLEPRKI-GPFTIHGIFLKRQTEVSETFARVNCVEILHTKAIWETILGGPLSPNFFAMLRAHSIVFTEKLVGGLKPLAVTAMGSDKFAEMKEEIASEIAER-LPAIMPYSYQYTTDALDMETTIRERMQKLSYEEFEGVLHPAFEEDEILLILVGGILGLLAGALQVLIFY 718          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S4K4B8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4B8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 4.050e-67
Identity = 119/252 (47.22%), Postives = 160/252 (63.49%), Query Frame = 1
Query:   10 DITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            DI  + V+  V+NK L+N++F ECG KE  FI RSGFYFGF+FG  Q + W+FY   W+LPV     G  TNWLALK+IF+P+EP +  G  T  G+FL RQ EVS  FA++N  E+L+++ +W A    PLS  F    R H  VF + M G L+P+ +A +G + F  +K+ IA +I    L      + +Y  ++LD+E T+R  MQ LS  EFEGVLHP FEEDE+ LI VGG LG  VG++QL  +F
Sbjct:  205 DIKQMTVAACVKNKPLVNKIFQECGDKEFNFIRRSGFYFGFMFGCCQMVIWFFYDGSWILPVFGFLVGWTTNWLALKVIFRPLEPKKF-GCITVHGIFLKRQMEVSETFARVNCVEILHTKAIWDAILTGPLSMNFYAMLRAHTIVFTENMIGGLKPVAIAAMGAKTFARMKEDIATKIAQK-LPTIIDQSYEYMTEALDMENTIREKMQALSFSEFEGVLHPAFEEDEIILIFVGGVLGCLVGIIQLFALF 454          
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A1Z5KAV6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAV6_FISSO)

HSP 1 Score: 221 bits (563), Expect = 9.110e-67
Identity = 116/255 (45.49%), Postives = 168/255 (65.88%), Query Frame = 1
Query:    1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
            DV++I HLAV+  VENK L+ ++F ECG+KE +FI +SGFYFGF FG+ Q   W+FY   W+LP     VG  TN+LALK IF+P+ P +  G +T  G+FL RQ EVS  FA++   E+L+ + +W A    PLS  F    R H  VF++ +   ++PL +A +G + F  +K+ IA ++  + L      + +YT ++L++E T+R+ MQ L+  EFEGVLHP FEEDE++LI++GG LGA VGV+QL  +F
Sbjct:  158 DVVNIKHLAVTACVENKDLIVKVFQECGEKEFVFIRQSGFYFGFAFGVIQMGVWFFYDASWILPTAGFIVGWFTNYLALKCIFRPLHPRKFMG-YTIHGIFLQRQAEVSEVFARVIMTEILHVKAIWDAIFMGPLSVNFNAMLRAHTLVFVEKLVAEIKPLAIAAMGADRFARMKEDIAQKVIEN-LPTIIDNSYEYTQEALNMEETVRIRMQKLTPAEFEGVLHPAFEEDEIQLILLGGILGAIVGVIQLYAVF 410          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G378_ECTSI1.080e-8155.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SNZ7_9STRA5.120e-8053.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9WC17_9STRA2.550e-7549.80Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A7S2EBD3_TRICV7.010e-7450.98Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8C8A7_THAPS8.200e-7147.06Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7R9WPM9_9STRA1.640e-7048.44Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2LQF0_9STRA9.390e-6845.10Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0RT03_THAOC1.730e-6748.24Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4K4B8_9STRA4.050e-6747.22Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1Z5KAV6_FISSO9.110e-6745.49Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2006contigP-wetherbeei_contig2006:4088..6310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G378
PFAMsDUF445
Model size744
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.78e-82
EggNOG OGs28M2H@1|root,2QTJ6@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-03_004840.1
Cds size744
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2006.5.1prot_P-wetherbeei_contig2006.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2006 4088..6310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186189.7266736-CDS-P-wetherbeei_contig2006:4087..41911683186189.7266736-CDS-P-wetherbeei_contig2006:4087..4191Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2006 4088..4191 -
1683186189.735267-CDS-P-wetherbeei_contig2006:4371..44891683186189.735267-CDS-P-wetherbeei_contig2006:4371..4489Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2006 4372..4489 -
1683186189.7458475-CDS-P-wetherbeei_contig2006:4828..49771683186189.7458475-CDS-P-wetherbeei_contig2006:4828..4977Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2006 4829..4977 -
1683186189.7563894-CDS-P-wetherbeei_contig2006:5284..54651683186189.7563894-CDS-P-wetherbeei_contig2006:5284..5465Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2006 5285..5465 -
1683186189.763736-CDS-P-wetherbeei_contig2006:5699..57931683186189.763736-CDS-P-wetherbeei_contig2006:5699..5793Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2006 5700..5793 -
1683186189.7714834-CDS-P-wetherbeei_contig2006:5986..60331683186189.7714834-CDS-P-wetherbeei_contig2006:5986..6033Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2006 5987..6033 -
1683186189.7798676-CDS-P-wetherbeei_contig2006:6259..63101683186189.7798676-CDS-P-wetherbeei_contig2006:6259..6310Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2006 6260..6310 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2006.5.1

>prot_P-wetherbeei_contig2006.5.1 ID=prot_P-wetherbeei_contig2006.5.1|Name=mRNA_P-wetherbeei_contig2006.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQ
TLAWWFYPEGWVLPVGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQ
TEVSAAFAKINAAEVLNSEHLWQARPLSHVFEEKCRLHVNVFLDAMAGPL
RPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTL
RVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF*
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mRNA from alignment at P-wetherbeei_contig2006:4088..6310-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2006.5.1 ID=mRNA_P-wetherbeei_contig2006.5.1|Name=mRNA_P-wetherbeei_contig2006.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2223bp|location=Sequence derived from alignment at P-wetherbeei_contig2006:4088..6310- (Phaeothamnion wetherbeei SAG_119_79)
GACGTGCTGGACATCACCCACCTTGCCGTCTCACTAATGGTGGAGAATAA GGTGAGGGCCGCTTCTTAAAGCTGCACCGAAACATTTCTCTTCGTATCGC GTCCAAGGGATGCAGCAATTTCGATTGGGCACTTAAGGGACTGGTGCAAA GACATTTCCTCGTCAACCTGTGCGCTCCCTCGAACCGCCGCCCGGGTGGT CCGCTGCTACTTGCTCCTGTTCGCTGCGGACTCTCGCTGGCTGCCACCTT GTGGTTGGGCCCGCAACGGGCCGGCAGGCGCTCCTGAACCGGATGTTCCT TGAATGCGGGCAGAAAGAGCTAATGTGAGTCTCCGTCCGTTTCCAGGCTC AGGCGCTACCAGTATTCGTCGTGAGTAGTTTGGTGCCGTGCTTTGGCAGC GTCTCAGCGCGTGAGGGTGAAGAGGAGAACCTTTTCCCAACAGCAGTTCA GGCAACCCCTGCTTCGCTTAGTGAAAGTTCGCCGCCCCGGTCCCTTCCGG CACTGCATGCTGTGCAGATTCATCGAGCGGTCCGGCTTCTACTTCGGCTT CCTCTTCGGCCTCTTCCAGACGCTCGCGTGGTGGTTTTACCCAGAAGGAT GGGTTCTCCCAGTCTGCGGCTTCTTGGCGAGTGGAAGTATGAAAGCTCCT GATTCGCCGCCCCGACCGATCGCGGCCGTCGCTTTTGTTTGGCGGGAGTG ATGCATTCACAGGCTCCACGCTCCACGGCACGTTTGAGGAGTTCCATAAT CCCTGACGCTGAGTTCGTTGCCACCCACCTGCTTTGCACTCTGCGGCGCC AATGACGTCAGTTGTGCCTCGGAATATGCTCCCTTACTGCTGCAGGTGGG GATTCTCACGAACTGGCTGGCGCTGAAAATCATATTTCAACCCGTGGAGC CGGTCCGCGTCTGCGGGCTCTTCACCGCGCAGGGACTTTTTTTGCTGCGG CAGACGGAGGTCAGCGCCGCCTTTGCCAAGATTAATGCCGCTGAAGTGCT CAACTCCGAGCACCTGTGGCAGGCACGTGAAGGAGGGGCAGAGATCTGTC CGAACCAAGGCGGGCTGGCTGAGTGGCGTTGCATGCCTGGCAAAGTTCGG TTTGCGGCCAGGGAGTTAAAAGATGTGGCCGGTGCCGGGACGCGCCGCAC CGCCTGTGTCTTCCTGCTTTGGAAAGTTGATTAGAAGGAAGGAACTGTTT CGCTGCCTCGGAAGTCTGGTGCGTTGACCTGCGTGCCGCTCGCCGCAGCA AATGACAAACAACATCGCTGCACCGCGCCCGCCGCCGCACCTACACGTTT TTGACGAAAAACACGAGCAGGGCATCCTGACAGGGCCGCTGTCGCACGTC TTCGAGGAGAAGTGCCGCCTCCACGTGAACGTATTCCTGGACGCCATGGC GGGGCCGCTGCGACCGCTCGTGGTGGCTTATCTGGGTAAGGAGGAATTCC ACGAGGTGAAGGACCACATCGCCGCGGAGATCGTGCGGCAGCTGCCCGGC ACCATCAGGCGAGAGAGCGAGAGAGGAAGAGGAAAACAGGCGACACAGAT GTCGTCCGCCATACGTTCTTTCCACCTCGGCGGTGGCAGTTGTGACTATT TCTGGGACGTTTCCTCGAAAGTTTCCTCGGAAGTTGTTCTATGTCGTAGC GTTTCTGATATGTTTTCTCGTTTCTCGTTTCGTAACTGTTTCCCTGCTGG GCTGCGTGTACGGTCTGTCGAAGGCTTCTGCAGGCGGGTTTTATCTCCTG CAGTTTTCATCACCATCCCGCTTGGCAGCGGGAGGCTCAGCAAGCGTTTG CACTTCGCAGACTGAGAACAGCCTTCTTCCTGCCTCTCTTGCCAAGCCAG GTATGCGAACAAGTACACAGATCAAAGCCTCGACCTCGAGACGACGCTGC GCGTCGCAATGCAGAACCTTAGCTCGAAGGAATTTGAAGGTGCGCACGTT TTTCGGCTTCCCACGGTTTGGGTTCCAGAGGATGTCCTAGTTGGGCGGTC GATTGATCTAGCTCAGCAGGGTTCTTCACTAGGCCATCCGTGCTAATCAT TCTGCCAAGATGAATTCCGCGTCGTTTGGCTTGCTTTGGTAACCACGTCT TGGCTGCAATGTCATTCAGGGGTGCTGCACCCCGTCTTCGAGGAGGACGA GCTGAAGCTCATCGTGGTCGGCGGCGCTCTCGGCGCTGCCGTTGGAGTCC TCCAGCTTGCGTTCATGTTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2006:4088..6310-

>mRNA_P-wetherbeei_contig2006.5.1 ID=mRNA_P-wetherbeei_contig2006.5.1|Name=mRNA_P-wetherbeei_contig2006.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig2006:4088..6310- (Phaeothamnion wetherbeei SAG_119_79)
GACGTGCTGGACATCACCCACCTTGCCGTCTCACTAATGGTGGAGAATAA
GGCGCTCCTGAACCGGATGTTCCTTGAATGCGGGCAGAAAGAGCTAATAT
TCATCGAGCGGTCCGGCTTCTACTTCGGCTTCCTCTTCGGCCTCTTCCAG
ACGCTCGCGTGGTGGTTTTACCCAGAAGGATGGGTTCTCCCAGTGGGGAT
TCTCACGAACTGGCTGGCGCTGAAAATCATATTTCAACCCGTGGAGCCGG
TCCGCGTCTGCGGGCTCTTCACCGCGCAGGGACTTTTTTTGCTGCGGCAG
ACGGAGGTCAGCGCCGCCTTTGCCAAGATTAATGCCGCTGAAGTGCTCAA
CTCCGAGCACCTGTGGCAGGCACGGCCGCTGTCGCACGTCTTCGAGGAGA
AGTGCCGCCTCCACGTGAACGTATTCCTGGACGCCATGGCGGGGCCGCTG
CGACCGCTCGTGGTGGCTTATCTGGGTAAGGAGGAATTCCACGAGGTGAA
GGACCACATCGCCGCGGAGATCCCTTCTTCCTGCCTCTCTTGCCAAGCCA
GGTATGCGAACAAGTACACAGATCAAAGCCTCGACCTCGAGACGACGCTG
CGCGTCGCAATGCAGAACCTTAGCTCGAAGGAATTTGAAGGGGTGCTGCA
CCCCGTCTTCGAGGAGGACGAGCTGAAGCTCATCGTGGTCGGCGGCGCTC
TCGGCGCTGCCGTTGGAGTCCTCCAGCTTGCGTTCATGTTCTGA
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