mRNA_P-wetherbeei_contig2003.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2003.1.1
Unique NamemRNA_P-wetherbeei_contig2003.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: D8LR70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR70_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.540e-73
Identity = 187/422 (44.31%), Postives = 243/422 (57.58%), Query Frame = 1
Query:  403 RASTREEGLQKLTSAMLHSNDPNFLSSVWDGALPHLLATLRNP-SRNEGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAAVRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVARVARRRQLPALVECLRCPRSTVRVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGS-GGTGGAKVFRSKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            RASTRE GL+ +   MLHS D   + ++ +  L  L+   R   + ++G  A RA++VLC  +GP+  +AF  +   LR LITR  H  VRV A R L L+CF+C               +D   T  TL LL  VF R SDGL V D++CAAAL GWGL+ +  +   VA    ++ L    E L  P   VR+ AGENLALLHE ++     G              GGEG  G  +                 XXXXXXXXXXXXXXX AA+ E +D   LWEEV   +K    ++SK++SRE++KQQRRTFR++ ATI ++EPPEE +SL NGSL V+ WA +KQ+ A+R CLQ GFQ Q+Q N  LR +LGV   GGTGG K F SK++   K +TT RTRSR S+Q A+DH    +
Sbjct:   81 RASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSALIGVARGKGTESQGAHALRALSVLCVCIGPEEEEAFRSLRRPLRSLITRSRHEGVRVGAVRTLALACFICS--------------SDDDNTSETLDLLADVFSRTSDGLEVTDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSSPDMDVRIEAGENLALLHESRIILGLVG--------------GGEG--GSADWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAEMEAMDLTVLWEEVVEEMKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQTQMQSNELLREILGVSKWGGTGGEKPFYSKNSEVRKQQTTSRTRSRHSKQEAQDHIFLGE 472          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A7S2XZE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE4_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.150e-46
Identity = 143/432 (33.10%), Postives = 216/432 (50.00%), Query Frame = 1
Query:  403 RASTREEGLQKLTSAMLHSNDPNFLSSVWDGALPHLLATLRNPSRNEGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAAVRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVARVARRRQLPALVECLRCPRSTVRVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEI-----DEN---ELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSGGTGGAKVFR----SKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            R  TR +GL +LTS +L  + P  +    +  L ++L  +R+        A RA+AVLC L+GP+  + +  +   LR ++TR  HA  R AA R L ++CF+C               +  + T   L   + VF+R S G+ V DE+  AAL  WGL+ +      V + A  R L  L+  L     +VR+AAGEN AL+HECK+                                  E EA A                        A+AEE+     DE    E+W+E+   ++ L GE+SKR+S+++RK+ R TFREI A+IV+D+ P E + ++ G++ ++ WA + QV A+R  ++GGFQ+QLQ N  LR +LG      G + V R    +KS+   K +TTERT+ R +RQ+ +D FL +D
Sbjct:   87 RRDTRCKGLTELTSMLLRGS-PEQIEDFRETVLTNVLQNIRSGDAKTVPLACRALAVLCILIGPEEEELYQRIENPLRTIVTRHSHAEGRKAALRCLAIACFICS--------------SQDADTHDLLDFCQRVFQRRSPGVMVTDEVIPAALSCWGLLATTLTTEFVHQTAGPRVLRTLLAFLEHGDMSVRMAAGENAALIHECKMKKVH------------------------------ELEALAEEK-----------------QLDEAEAEELIHQADDEQGIAEVWDEIIARMEDLRGESSKRISKKNRKEVRATFREIYASIVEDDNPSEQLQVVGGTIRLNTWAHIVQVDALRNTMRGGFQIQLQVNPILREILGECFQNDGVSMVDRRANYAKSSDWQKYKTTERTKQRKARQNQRDVFLDSD 456          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A835YVX4_9STRA (Interferon-related developmental regulator-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVX4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 9.120e-34
Identity = 137/445 (30.79%), Postives = 207/445 (46.52%), Query Frame = 1
Query:  355 QHSPNSLRANSLDK--GHRASTREEGLQKLTSAMLHSNDPNFLSSVWDGALPHLLATLRNPSRN-EGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAAVRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVARVARRRQLPALVECLRCPRST-VRVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPE-ETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLG-VGSGGTGGAKVFRSKSNGASKSRTTERTRSRASRQSAKDHFLYADDGS 1671
            + +P    +++LDK    R++TR  GL  L + +  + D + + +        +LA LR P+   E              LG +  + + ++A  L   ITR +H   RV A RAL ++CFVC               +D  A D  L  L  VF R S+G  V D++ AAAL GW L+ +A     +   A    LPA+ + L    S  VR AAGE  AL+                                  + + G  EAAA                           E  D   LW+E+   ++  + ETSKRMS++++K QRRTFR++ A +V+  PP  + +SL + +++++ WA++ ++ A+R CL GG Q Q   N  +R +LG V  GG  G     +KS GA K R+  R+R RASRQ+AKD FL+ D+G+
Sbjct:   90 EDAPLDPLSDALDKLGEKRSATRLAGLGALLTLLQAAADLDAIHARRAALAEAVLACLRRPAAPAEXXXXXXXXXXXXXXLGAEEDELYRQLARLLTTSITRGKHEGSRVEACRALAMACFVCS--------------SDDDANDEALATLSAVFSRTSEGTEVTDDVAAAALRGWCLLATAGPREWLGGPALEALLPAVRDLLAGGASLDVREAAGEAAALMXXXXXXXXX------------------------XQAEAGIEEAAAE--------------------------EYSDVETLWQEIGDLMQGYSTETSKRMSKDTKKSQRRTFRDLHAAVVEGAPPPWQELSLQSCAVEITTWAELVRLEALRACLHGGLQSQAAHNATVRDILGAVDGGGAAGGTPALAKSGGARKYRSETRSRQRASRQNAKDSFLW-DEGA 469          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A7S3XM20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM20_HETAK)

HSP 1 Score: 130 bits (328), Expect = 1.310e-28
Identity = 133/430 (30.93%), Postives = 184/430 (42.79%), Query Frame = 1
Query:  403 RASTREEGLQKLTSAMLHSNDPNFLSSVWDGALPHLLATLRNPSRNEGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAAVRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLR---HVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVARVARRRQLPALVECLRCPRSTV--RVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDEN-----ELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSGGTGGA---KVFRSKSNGASKSRTTERTRSRASRQSAKDHFL 1653
            R++TREE L  L   ML +     + +     L  LLA+L      E V A RA    C +LGPD  + F  +   L RL+TR E    R AA RAL + CF+C                  S    TL LL     + +  S G P+ DE   AALE WGL+ + A    +        +P  +E L+   + V  R+AA E LAL++E      E+              W  E           +    A   GE                      EE+ E      E W E    +  L  E+SKR+S+  RK+QR   R++ A + D E PEETIS   GS+ V+ W +  QV A+R   +GGFQ QLQ N  ++ +L         A   K + +KS+  +K RT  R  +R  RQ+A+  FL
Sbjct:   92 RSTTREEQLGVLYEHMLAAPSAEGVYAARAEILERLLASLGKGGA-EAVLACRAAGAFCVVLGPDEQEVFRALRRRLERLVTRGEDDEARTAAIRALAVGCFICS-----------------SVHHDTLELLELFVDLLQGTSQGEPLMDESVPAALEAWGLLATTAGEEYMQETGGPVVVPLCLEQLQGGGAGVETRMAAAEVLALVYEALHPKEEE---------PDPEDWRAE-----------QARRRAVAAGEL--------------------VEEVPEEDPFMAEQWAEAVGVLGRLQAESSKRVSKRDRKEQRSVVRDVRAFLEDGETPEETISFQGGSITVTSWERFCQVNALRAACRGGFQNQLQTNAVVQEILAEDYAAAHSAVDKKAYYAKSSSMNKERTQHRRGARQRRQAAQQAFL 463          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A7S2H1J3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H1J3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.450e-26
Identity = 130/456 (28.51%), Postives = 198/456 (43.42%), Query Frame = 1
Query:  379 ANSLDKGHRASTREEGLQKLTSAMLH-----SNDPNFLSSVWDGALPHLLATLRNPSRN--EGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAA-VRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVARVARRRQ----------LPALVECLRCPRSTVRVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSGGTGGA----------KVFRSKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            A+++    R   RE+ L++L  A+       S     LS V D  +P     LR  S +  E   A R + V   +LG DH D  + V   LR ++     A  VR AA RAL +  F+C               A+ + T++ L L   V      G  V   L A AL+ W L+ +      +A      +          LP L +CL      +R AAGE +AL+HE +L                           ++  D  EGE A+      G                  D  E +   L +EV + V  L+ E+ + MS++++K+QR TFR+  ATIVDDEPP E ++   G+L++  W ++ Q+  VR CLQGGFQ+QL  N  L  V  + +     A          ++  SK++  +K+   + TR R +R +AK++F+ AD
Sbjct:  101 ASTIPTEKRTVKREQYLRRLFKAISQFAAGQSGQEAVLSRVDDAIVPACKTGLRGGSASPAEQYAACRVLEVTSVILGGDHDDYVEAVDRPLRIVVKSTGRAPQVRGAALRALSMIHFICD--------------ANEAGTNSVLDLCEEVCAPQYRGEDVCPTLRAIALDCWALLSTTVDDAYIAGDELGSETGENGRGVVILPLLSQCLNESNVELRCAAGECVALIHESRL---------------------------NLGIDDDEGENASERRFRRGSW----------------DGSEWEV--LMDEVKQRVAELSVESGRHMSKKAKKEQRATFRDFMATIVDDEPPVEVVNFRGGTLNLKSWREIVQINFVRHCLQGGFQIQLMTNETLHMVFNIDAAIINDAEGASLSQLEKRLIMSKTSDVAKAADRDLTRRRRNRTNAKNYFITAD 497          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A7S3L515_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L515_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.120e-25
Identity = 129/449 (28.73%), Postives = 192/449 (42.76%), Query Frame = 1
Query:  403 RASTREEGLQK----LTSAMLHSNDPNFLSSVWDGALPHLLATLRNPSRNEGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAAV-RVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVAR---VARRRQL---PALVECLRCPRST----------VRVAAGENLALLHECKLAAAED-GYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLN-GSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSGGTGGA------KVFRSKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            R++TRE  L++    LT  +        +    +      L +LR  S  E   A R +     +L  D  +    +AP L R +     AAV R +A RA  LS F+                 ++  T A L +   V +      PVP  L AAAL+ W L+ +     +VA    V+  R L   P L +CL    +T          +R AAGE +AL+HEC+L+ ++D G             W  EG   +V  D                                             E+ ++V  LA ++   MS++++K QR TFRE  ATIVDDE PEE +++ N GSL ++ W ++ Q+  +R  LQGG Q+QL  N  LR + GV  G           ++F SK++ A+K    + T++R  R+  K HFL AD
Sbjct:   96 RSATRETRLRRIFKGLTQYVAGEASTELVWGCQESLRTACLYSLRAGSAAEQYAACRVLEATAVVLQGDQEEWIQSIAPVLHRTVQIASRAAVVRASALRAWALSVFI--------------GSGEMEDTHAVLDVCEDVAQIIYRNEPVPTALRAAALDCWTLLATTLTEYAVAGNDDVSHGRGLTLLPLLKDCLESNETTSSLSSSSSSQLRTAAGECVALIHECRLSLSDDSGEKNTTERKFQQGSW--EGTEWEVVMD---------------------------------------------EIRQSVSELAQQSGHYMSKKAKKAQRATFREYVATIVDDEAPEEVVAMRNEGSLTLTSWKEIVQLGFIRAALQGGLQIQLMTNETLRIMFGVQGGVKADGLSSLEKRLFFSKASEAAKEADRKLTKNRDKRERVKHHFLTAD 483          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A7S1YWK5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YWK5_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.610e-25
Identity = 115/388 (29.64%), Postives = 172/388 (44.33%), Query Frame = 1
Query:  553 AARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAAV-RVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVARVARRRQL-------PALVECLRCPRSTVRVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSG----GTGGA------KVFRSKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            A R + V   ++G D  D  + +   LR +I     AAV R AA RAL ++ F+C               AD S T + L L   V      G  V   L A AL+ W L+ S  A   +A       L       P L  CL      +R AAGE +AL+HE +L                           ++  D  EGE A+      G                  D  E +   L +EV + V  L+ E+ + MS++++K+QR TFR+  ATIVDDEPP E ++   G++ +  W ++ ++  VR CLQGGFQ+QL  N  L  +  + +      TG A      ++  SK++ A+K+   + TR R +R + K++F+ AD
Sbjct:    2 ACRVLEVTSVIIGHDQDDYVESIEQPLRLVIKGTHRAAVVRGAALRALAMTHFICG--------------ADESGTHSVLNLCEEVCAPQYRGEDVSPCLRAIALDCWALLSSTVADAYLAGDEMEEDLGRGLVILPLLSTCLNSSNMELRCAAGECVALIHESRL---------------------------NLGIDEDEGENASERRFRRGSW----------------DGSEWEV--LMDEVKQRVAELSVESGRHMSKKAKKEQRATFRDFMATIVDDEPPVEVVNFRGGTVTLRTWREIIEINFVRHCLQGGFQIQLMTNETLHMIFDIDASTINDATGAALSQLEKRLTMSKTSEAAKAADLDMTRRRRTRTNVKNYFITAD 330          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A7S0PVU5_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PVU5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.960e-25
Identity = 124/442 (28.05%), Postives = 187/442 (42.31%), Query Frame = 1
Query:  403 RASTREEGLQKLTSAMLH---SNDPNFLSSVWDGALPHLLATLRNPSRN--EGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAA-VRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVA-----RVARRRQ-LPALVECLRCPRSTVRVAAGENLALLHEC--KLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSGGTGGAKVFR--------SKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            R++TRE  L+KL  A+             +  +  +P  L  LR       E   A R +     +LG D+ + F+ +   LRR++     A  VR AA R L ++ F+C                D   T++ L L   V   +         L A AL+ W L+ +      +A     +  R  Q LP L  CL      +R AAGE +AL+HE   KL   ++              W           DG E E                                     + +EV + V  L+ E+ + MS++++K+QR TFRE  ATIVDDEPP+E I+   G+L+++ W +V Q+  +R CLQGGFQ+QL  N  L  + G      G A+           SK++ A+K+     T++R +R + K+HFL AD
Sbjct:   40 RSATREGYLRKLFRALTQFATGYAARETVASCESLVPACLYGLRGGVAKPAEQYAACRVLEATAVILGGDNDEYFESIEKYLRRVVMTTTRAVQVRGAALRTLCMANFICS--------------TDTDITNSLLALCEEVCAPEYRNESASSILRATALDCWALLSTTIHDAFIAGDDDFQTGRGLQILPLLSNCLDHTSVELRSAAGECVALIHESRLKLGVEKEDCDNASDRRYRRGSW-----------DGSEWEV------------------------------------IMDEVKQRVAELSVESGRHMSKKAKKEQRATFREFMATIVDDEPPKEVITFRGGTLELNSWKEVVQLNFIRHCLQGGFQIQLLTNDTLHAIFGADGRMLGNAQTLSQLEKRMIFSKTSDAAKAADQNMTKNRRNRNNVKNHFLTAD 420          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: A0A7S4J5R0_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5R0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.590e-23
Identity = 130/453 (28.70%), Postives = 190/453 (41.94%), Query Frame = 1
Query:  379 ANSLDKGHRASTREEGLQKLTSAML-HSNDPNFLSSVW----DGALPHLLATLRN--PSRNEGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHAA-VRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVARVARRRQ---------LPALVECLRCPRSTVRVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSGGTGGA--------KVFRSKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            A+++    R++ RE+ L+KL  A+  ++       SV+    D  +P   A LR    S  E   A R +     ++G D  D  + +   LR+ I     A+ VR AA RAL ++ F+C                D+SAT++ L L   V      G  V   L A AL+ W L+ +  A   +A                LP L ECL      +R A GE +AL+HE +L                       GI  D      EGE A       G                           L +EV + V  L+ E+   MS++++K+QR TFRE  ATIVDDE P E +S   G L +  W ++ Q+  +R CLQ GFQ+QL  N  L  + G                 ++  SK++ A+K+   + TR R +R + K+HFL AD
Sbjct:   89 ASTIPTEKRSAKREQHLRKLFKAITQYATGEQGRESVYAKLDDIVIPACFAGLRGGIASPAEQYAACRVLEATSIIIGGDMDDYCEAIDDQLRKTIKATGRASMVRGAALRALCMAHFICG--------------TDMSATNSVLDLCEAVCAAKYRGEEVNPTLRAIALDSWALLSTTVADAYIAGDELGGVDDSGRGIIILPILQECLNHTSVELRSAGGECVALIHEARLNL---------------------GINDD------EGENATERRYRRGSWDGTEWEV------------------LMDEVKQRVAELSVESGHHMSKKAKKEQRATFREFMATIVDDESPSEIVSFRGGQLTLKSWREIIQLNFIRHCLQSGFQIQLMTNPTLHAIFGADGNLLSTIENMSQLEKRLTMSKTSQAAKAADVDLTRRRRNRTNMKNHFLTAD 482          
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Match: B7G151_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G151_PHATC)

HSP 1 Score: 115 bits (288), Expect = 2.040e-23
Identity = 115/398 (28.89%), Postives = 176/398 (44.22%), Query Frame = 1
Query:  514 ATLRNPSRNEGVGAARAVAVLCTLLGPDHHDAFDEVAPALRRLITRCEHA-AVRVAAARALGLSCFVCXXXXXXXXXXXXXXXADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAAPGSVA-----RVARRRQLPALVE-CLRCPRSTVRVAAGENLALLHECKLAAAEDGYGXXXXXXXXXXXWGGEGIGGDVETDGGEGEAAAAPNGETGXXXXXXXXXXXXXXXXAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFREICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQWNRPLRTVLGVGSGGTGG--------AKVFRSKSNGASKSRTTERTRSRASRQSAKDHFLYAD 1662
            + LR  +  E   A R +     LLG D  +  + +   LRR++     A AVR+AA RA  +S F+                +D   ++A + + + +         VP  L A AL+ W L+ +  A   +A     ++ R   L +L++ CL      +R AAGE L+L+HE +L                        +G D ET     E + A     G                  D  E +   L +EV + V  L+ E+   MS++++K+QR TFRE  ATIVDDE PEE I+   GSL +  W ++ Q+  +R CLQGGFQ+QL  N  L+++ G                 ++  SK++ ASK       + R  RQ+ K+HFL +D
Sbjct:  140 SALRGGAPAERYAACRVLEAASVLLGEDQDEWHESIERDLRRVVHGATKATAVRMAALRACSMSAFI--------------NTSDTETSEALMDVCQAIANETYRNETVPVALRATALDCWALLATTVADYYLAGQDDVQLGRGLDLLSLLKACLETTSMELRSAAGECLSLIHEARLN-----------------------LGVDEET----AENSTARRYRRGSW----------------DGSEFEV--LMDEVKQLVATLSMESGHHMSKKAKKEQRATFREFVATIVDDEAPEEIINFRGGSLSLHTWREIIQLNFIRHCLQGGFQIQLLTNATLQSIFGANGAALNDFAGLSQLEKRLTLSKTSEASKIADQVMAKQRTKRQNVKNHFLTSD 478          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2003.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR70_ECTSI1.540e-7344.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XZE4_9STRA2.150e-4633.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YVX4_9STRA9.120e-3430.79Interferon-related developmental regulator-domain-... [more]
A0A7S3XM20_HETAK1.310e-2830.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H1J3_9STRA5.450e-2628.51Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3L515_9STRA1.120e-2528.73Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1YWK5_9STRA1.610e-2529.64Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0PVU5_9STRA2.960e-2528.05Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S4J5R0_9STRA1.590e-2328.70Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
B7G151_PHATC2.040e-2328.89Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2003contigP-wetherbeei_contig2003:2205..5140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LR70
Preferred nameIFRD1
PFAMsIFRD,IFRD_C
Model size2426
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0001085,GO:0001558,GO:0001709,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006355,GO:0006357,GO:0006950,GO:0007275,GO:0007399,GO:0007405,GO:0007518,GO:0008134,GO:0008150,GO:0008283,GO:0008361,GO:0009611,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010721,GO:0010769,GO:0010771,GO:0010975,GO:0010977,GO:0014009,GO:0014706,GO:0016043,GO:0019219,GO:0019222,GO:0022008,GO:0022603,GO:0022604,GO:0030154,GO:0030308,GO:0030516,GO:0030517,GO:0031099,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031345,GO:0032501,GO:0032502,GO:0032535,GO:0040007,GO:0040008,GO:0042060,GO:0042063,GO:0042246,GO:0042692,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043403,GO:0044093,GO:0044424,GO:0044464,GO:0045165,GO:0045445,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045893,GO:0045926,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048625,GO:0048638,GO:0048640,GO:0048670,GO:0048671,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050770,GO:0050771,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051239,GO:0051241,GO:0051252,GO:0051254,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0060537,GO:0061061,GO:0061351,GO:0061387,GO:0061629,GO:0065007,GO:0065008,GO:0065009,GO:0071840,GO:0072089,GO:0080090,GO:0090066,GO:0120035,GO:1902680,GO:1903506,GO:1903508,GO:2000026,GO:2000112,GO:2001141
Exons2
Evalue2.57e-73
EggNOG OGsKOG2842@1|root,KOG2842@2759|Eukaryota
Ec32 ortholog descriptionInterferon-related developmental regulator, N-terminal
Ec32 orthologEc-06_004140.1
DescriptionRNA polymerase II sequence-specific DNA-binding transcription factor binding
Cds size1227
COG categoryCO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186188.9737058-UTR-P-wetherbeei_contig2003:2204..26511683186188.9737058-UTR-P-wetherbeei_contig2003:2204..2651Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2003 2205..2651 +
1683186189.015022-UTR-P-wetherbeei_contig2003:4388..51401683186189.015022-UTR-P-wetherbeei_contig2003:4388..5140Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2003 4389..5140 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186188.9853961-CDS-P-wetherbeei_contig2003:2651..36131683186188.9853961-CDS-P-wetherbeei_contig2003:2651..3613Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2003 2652..3613 +
1683186189.002557-CDS-P-wetherbeei_contig2003:4123..43881683186189.002557-CDS-P-wetherbeei_contig2003:4123..4388Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2003 4124..4388 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2003.1.1prot_P-wetherbeei_contig2003.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2003 2652..4388 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2003.1.1

>prot_P-wetherbeei_contig2003.1.1 ID=prot_P-wetherbeei_contig2003.1.1|Name=mRNA_P-wetherbeei_contig2003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=409bp
MLHSNDPNFLSSVWDGALPHLLATLRNPSRNEGVGAARAVAVLCTLLGPD
HHDAFDEVAPALRRLITRCEHAAVRVAAARALGLSCFVCCAGGGDDDGGS
GGGGADVSATDATLTLLRHVFRRDSDGLPVPDELCAAALEGWGLIVSAAA
PGSVARVARRRQLPALVECLRCPRSTVRVAAGENLALLHECKLAAAEDGY
GDGYGDGDGDDDWGGEGIGGDVETDGGEGEAAAAPNGETGGGGGGGDDGD
SDGGSSAADAEEIDENELWEEVTRAVKALAGETSKRMSRESRKQQRRTFR
EICATIVDDEPPEETISLLNGSLDVSGWAQVKQVAAVRQCLQGGFQLQLQ
WNRPLRTVLGVGSGGTGGAKVFRSKSNGASKSRTTERTRSRASRQSAKDH
FLYADDGS*
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mRNA from alignment at P-wetherbeei_contig2003:2205..5140+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2003.1.1 ID=mRNA_P-wetherbeei_contig2003.1.1|Name=mRNA_P-wetherbeei_contig2003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2936bp|location=Sequence derived from alignment at P-wetherbeei_contig2003:2205..5140+ (Phaeothamnion wetherbeei SAG_119_79)
CGACGACGAACCGTTTTCGGAGCCGGAGCGCGTGTCTGCAAGCGCTCTCG AAGATCTTATGGAAATGCTCACAGAAAAGAGGTATGCCCCCCACCCCTGC GTTGGAAGGGAACACCTATGCGTCTTCCTCTGGTCTTCTTCTTTGGAAAG ACGTTTCCAAGATGTCATTGAGTCTTGTCGCACTCCCTGCTTTATTTTGG GTGGTGGCATCTCGCCCTCTCTGTCGTACTGGTATCTGCTTTGTCTTTTG GAGAGGTGCATGCTGGTGCATGCTGGCACAACTTCCTTGCACCTCCGATA CGCATCTGAAGCTAGACGTTGCTTCTGTCTCTCTCAGGTCTGTGCTTCCT CCTGCAGCACTCACCAAACTCTCTTCGTGCAAACTCTCTCGACAAGGGGC ACAGGGCATCCACCCGAGAGGAAGGGCTGCAGAAGCTGACGTCGGCGATG CTGCACTCCAATGACCCCAATTTTCTGTCATCCGTCTGGGACGGCGCGCT GCCGCATCTGCTGGCGACGCTCCGCAACCCATCTCGCAACGAGGGCGTTG GCGCCGCGCGCGCCGTCGCTGTGCTCTGCACGCTGCTGGGCCCGGACCAC CACGACGCCTTCGACGAGGTGGCACCGGCGCTGCGCCGGCTGATTACGCG CTGCGAGCACGCAGCGGTGCGCGTCGCTGCCGCCCGTGCGCTCGGGCTCT CATGCTTCGTCTGCTGTGCCGGCGGCGGCGATGACGACGGCGGCAGTGGC GGCGGGGGGGCCGACGTGTCTGCGACGGACGCGACCCTGACGCTCCTGCG GCACGTCTTCCGCCGCGACAGCGACGGCCTGCCGGTCCCGGATGAGCTGT GCGCGGCGGCGCTTGAAGGGTGGGGGCTGATCGTCAGCGCCGCCGCGCCT GGCTCGGTGGCGCGGGTGGCACGGCGACGGCAGCTGCCGGCGCTAGTGGA GTGCCTGCGGTGCCCGCGCTCCACCGTCCGCGTGGCGGCCGGCGAGAATC TCGCGCTCCTGCACGAGTGCAAGCTTGCCGCCGCTGAGGACGGTTACGGC GACGGATACGGCGACGGCGACGGCGACGACGATTGGGGAGGGGAAGGGAT CGGTGGCGACGTGGAGACCGATGGCGGCGAAGGAGAGGCTGCTGCTGCAC CTAACGGAGAAACCGGTGGCGGCGGCGGCGGAGGCGACGACGGGGATTCG GACGGCGGCAGCAGCGCCGCGGACGCGGAAGAAATCGACGAAAACGAGTT GTGGGAGGAGGTGACGCGGGCGGTCAAGGCGCTGGCGGGGGAGACGAGCA AGCGCATGAGCCGCGAGAGCCGCAAGCAGCAGCGGCGGACCTTCCGGGAG ATCTGTGCGACAATAGTCGACGACGAGCCGCCAGAGGAGACAATCAGCTT GCTGAACGGGTGAGCGGTTGGTTGGTTTGGCCGGCGTTTGCCCTTTTGGC CGGCATTGGGAAGTGAGGTCTTACTCTTAGCTAGTGTGACTTTGCGGCGG CGGCCATAGCTACTGCTGGTTTAGCGCGCAATCCTGACTGAGAGTGTGAG AGTGAGTGAGTGAGTGAGTGAGAGAGATGGAGAGAGAAATTGCCGCTTTG CTTTTTGCCAATGGTAAGGTAAATGCTGCCGCCCGCTTTTATAACAAGCA TTCAGACGTGTGGCAGTAATCCACATGCGGCCTCTGCTCTTTTTTGTGGA AGCGACGGCGACCCAAAACCATGCTTCGGCCGTTCTTCCTCGTTTAAGCC TTCCGCCTGTTGTCCATAGTTGTATAATCCATTGCATTACGCTTCAAAGT AATCTTTTGGGGAAGTGCTCCCGCCGCTCTCAATCCTCGCCTTGATCAGT TTCCCTCTCCCCGGTCCTTCTTATCTCTTTCTTTTTCTGCCTTTTCTTTT CTCTTTTTTCTAAAACCAGGTCGCTGGACGTAAGCGGCTGGGCGCAGGTC AAGCAGGTGGCGGCGGTGCGGCAGTGTCTGCAGGGTGGCTTCCAGCTGCA GCTGCAGTGGAACCGTCCGCTGCGGACTGTGCTCGGCGTCGGCAGCGGCG GCACCGGGGGCGCCAAGGTCTTCCGCAGCAAGAGCAACGGCGCGAGCAAG TCGCGCACCACGGAGCGGACCCGCTCCCGGGCCAGCCGCCAGTCCGCCAA GGACCACTTCCTGTACGCGGACGACGGCTCCTGATTGGGCCCGCCCGGAT TGGATTCTCGTTGGTCAGGCTGGGTCGGACGGCAGTGACGGCTGACGGCT GGCGGCTGGCGGCTGGCGGTTGGCGGCTGGCGTCCGGCTTCCGGCACTAA TCGGATAGGTAGGCTGCGAGGTTCGGGATTAGTCAGTAGGGCGGGCGGAG ATGGGTGGTGGAAAGTGATCATATCAAATCGGGCGGTGCATATGGGAAAA CGGGCAGCCCGCGGCTGAACGGGGTTGGGCTGGACGACGGCCGTGCACTT GCCGCCAAAAAGTAGCTCACACCCTTCTTCAACGGCGGCGGTTTCCGTTG GCCTAAGCGGAGCTGCGGTCTAAGCGGAGCCGCGGTATCACTGGCTGCTC CGCTCCAAGAAGCATTATCGGAAGCCGAGAGCCTGCGGGAATGGTCAACC GGAAATAGACCCGGGGCAATGATAGAGAGTAAGTGAGAGAGAGGCCAAAA CCGATGGTTCTGGTAGCTCTTTTGCAGTCATGCTACGCTGGCTGCTGAGC TGCCGATCCCGCTGCGCTGCTGCCGCAGTGGCGCTGCCGGACAGAGGGGA GAAGTGGAAACAACGGGAACTGCTGCGGGTTGTTGCGTGTGAGGGCTTTT GGATGGTATCCCTTGCTGAATAAGGGTGGGGCCTGCCCCTGCATGCCTCC ACCCCCCTCCACATGTAAAGACGCATTATCGCCTTGCCCACCTGAAGCTA CAACCAGCGAAATTCGTTTTTTGCGGCTGCCGAGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2003:2205..5140+

>mRNA_P-wetherbeei_contig2003.1.1 ID=mRNA_P-wetherbeei_contig2003.1.1|Name=mRNA_P-wetherbeei_contig2003.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1227bp|location=Sequence derived from alignment at P-wetherbeei_contig2003:2205..5140+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCACTCCAATGACCCCAATTTTCTGTCATCCGTCTGGGACGGCGC
GCTGCCGCATCTGCTGGCGACGCTCCGCAACCCATCTCGCAACGAGGGCG
TTGGCGCCGCGCGCGCCGTCGCTGTGCTCTGCACGCTGCTGGGCCCGGAC
CACCACGACGCCTTCGACGAGGTGGCACCGGCGCTGCGCCGGCTGATTAC
GCGCTGCGAGCACGCAGCGGTGCGCGTCGCTGCCGCCCGTGCGCTCGGGC
TCTCATGCTTCGTCTGCTGTGCCGGCGGCGGCGATGACGACGGCGGCAGT
GGCGGCGGGGGGGCCGACGTGTCTGCGACGGACGCGACCCTGACGCTCCT
GCGGCACGTCTTCCGCCGCGACAGCGACGGCCTGCCGGTCCCGGATGAGC
TGTGCGCGGCGGCGCTTGAAGGGTGGGGGCTGATCGTCAGCGCCGCCGCG
CCTGGCTCGGTGGCGCGGGTGGCACGGCGACGGCAGCTGCCGGCGCTAGT
GGAGTGCCTGCGGTGCCCGCGCTCCACCGTCCGCGTGGCGGCCGGCGAGA
ATCTCGCGCTCCTGCACGAGTGCAAGCTTGCCGCCGCTGAGGACGGTTAC
GGCGACGGATACGGCGACGGCGACGGCGACGACGATTGGGGAGGGGAAGG
GATCGGTGGCGACGTGGAGACCGATGGCGGCGAAGGAGAGGCTGCTGCTG
CACCTAACGGAGAAACCGGTGGCGGCGGCGGCGGAGGCGACGACGGGGAT
TCGGACGGCGGCAGCAGCGCCGCGGACGCGGAAGAAATCGACGAAAACGA
GTTGTGGGAGGAGGTGACGCGGGCGGTCAAGGCGCTGGCGGGGGAGACGA
GCAAGCGCATGAGCCGCGAGAGCCGCAAGCAGCAGCGGCGGACCTTCCGG
GAGATCTGTGCGACAATAGTCGACGACGAGCCGCCAGAGGAGACAATCAG
CTTGCTGAACGGGTCGCTGGACGTAAGCGGCTGGGCGCAGGTCAAGCAGG
TGGCGGCGGTGCGGCAGTGTCTGCAGGGTGGCTTCCAGCTGCAGCTGCAG
TGGAACCGTCCGCTGCGGACTGTGCTCGGCGTCGGCAGCGGCGGCACCGG
GGGCGCCAAGGTCTTCCGCAGCAAGAGCAACGGCGCGAGCAAGTCGCGCA
CCACGGAGCGGACCCGCTCCCGGGCCAGCCGCCAGTCCGCCAAGGACCAC
TTCCTGTACGCGGACGACGGCTCCTGA
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