mRNA_P-wetherbeei_contig2002.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A835Z5V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V8_9STRA) HSP 1 Score: 250 bits (638), Expect = 1.010e-77 Identity = 132/254 (51.97%), Postives = 168/254 (66.14%), Query Frame = 2
Query: 11 IAVALALVLGLGDAFAPAIARNVVSISAQRSCRAARALQMTKGGDVDEETRANPNKG--RKGPTWMYNQEGRSLAPWMEDQFDPENLARVEESRKRRAAAAQERTKNAVGALAEDPQQMELSGLGLKYKMVGG-EIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPMQ 763
+AV LAL AF ++ + + SCR + AL+M + +KGPTWMYN+ G + APWM D FDPEN+A+VE + + R A +VG LA DPQ MELSGLGL K V G ++EL WKTGDE GN GFVV KRR KT+EW Q+ASYKDWAPLNSKG GG YTF+DP E+G WVYR+SDVNS+GS+NDLCQALI+VQ+ ++A+Q K AVA F +VV+ + + +DP+Q
Sbjct: 10 LAVCLALASFQAAAFTGPVSALRAAAVTKASCRRSAALRMAQEXXXXXXXXXXXXXXXVKKGPTWMYNKNGVAYAPWMVDTFDPENIAKVEAAMEARRLAKLNTVAESVGDLARDPQAMELSGLGLNIKQVNGNDVELEWKTGDEAGNLGFVVSKRRGKTDEWTQIASYKDWAPLNSKGEQGGRYTFVDPDCEQGTWVYRVSDVNSNGSRNDLCQALIEVQSASDALQAKAAVALFGVVVVAAIASAFLIDPLQ 263
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: D7FJQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ9_ECTSI) HSP 1 Score: 220 bits (560), Expect = 5.980e-66 Identity = 114/220 (51.82%), Postives = 148/220 (67.27%), Query Frame = 2
Query: 101 SCRAARALQMTKGGDVDEETRANPNKGRKGPTWMYNQEGRSLAPWMEDQFDPENLARVEESRKRRAAAAQERTKNAVGALAEDPQQMELSGLGLKYKMVGGE-IELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDP 757
SCR + + T+G + D+ K K P WM+N +G + APWM D FDPENLA+V S + R A+GALA DPQQMELSG GL K V E +ELTWKTG+E GN GF+V +R AKT+EW ++ASYKD+ PLNSKG GGGIYT+ D + + G WVYRISD++ G K+DLCQ LI++Q+ A+ +Q K+ VAG A+V+I AG +DP
Sbjct: 54 SCRMTKKTE-TEGAEGDK-------KKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVDLGTWVYRISDISKSGVKSDLCQTLIELQSGADELQTKIGVAGLAIVLIAAAAAGTFIDP 265
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A6V1RAY1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RAY1_HETAK) HSP 1 Score: 209 bits (532), Expect = 6.740e-62 Identity = 110/215 (51.16%), Postives = 136/215 (63.26%), Query Frame = 2
Query: 134 KGGDVDEETRAN-----PNKGRKGPTWMYNQEGRSLAPWMEDQFDPENLARVEESRKRRAAAAQERTKNAVGALAEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPMQ 763
K D DEE + K RK P M+N EG+ APWM D D E + +E R+ R AA + K A GAL DPQ MELSG+GLK KMVG E E++W TGDETGNKGF++ KRR +++W VASY DWAPLNSKG GG YT+MD TE+G W+YR+SDVN+ G +DLCQAL++VQ + M K G V + AG LDP+Q
Sbjct: 47 KATDEDEEIITDLEAYEAEKRRKAPKGMFNAEGKPYAPWMMDSVDAEKAKQAQEDRRARKAAEK---KAAQGALLVDPQAMELSGVGLKTKMVGDECEISWGTGDETGNKGFIITKRRGGSDDWQVVASYTDWAPLNSKGPAGGQYTYMDSDTEQGTWIYRVSDVNTQGQTSDLCQALVEVQDQGQQMATKAFAVGIIGVFGALLAAGLFLDPLQ 258
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A7S2RGG7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGG7_9STRA) HSP 1 Score: 179 bits (453), Expect = 4.580e-50 Identity = 88/189 (46.56%), Postives = 123/189 (65.08%), Query Frame = 2
Query: 200 MYNQEGRSLAPWMEDQFDPENLARVEESRKRRAAAAQERTKNAVGAL-AEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPMQ 763
MYN+ G + APWM +Q D E +E RK R +E ++ +GA+ + D EL+G GLKY+ VG E+EL+W T E N G+ VQKR A++E+W+ +ASY+DWAPL SKGA GG Y+F+DP++E+G W+YRI DV+ G LCQAL++VQ+ E + GFA + G V AG +DP+Q
Sbjct: 76 MYNENGVAYAPWMVNQIDEEAYLAAKELRKMRKKRDREASEAKIGAMVSSDVAADELAGSGLKYRFVGEEVELSWSTNTEPDNLGYKVQKRVARSEDWIDIASYEDWAPLASKGAAGGTYSFLDPNSEQGDWIYRIIDVDGSGRSTILCQALVEVQSAGERTLQLVLAGGFAAIFAGLVAAGTMIDPIQ 264
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A7S2FT64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT64_9STRA) HSP 1 Score: 173 bits (439), Expect = 8.000e-48 Identity = 91/188 (48.40%), Postives = 117/188 (62.23%), Query Frame = 2
Query: 200 MYNQEGRSLAPWMEDQFDPENLARVEESRKRRAAAAQERTKNAVGA-LAEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPM 760
M+N+ G + APWM +Q D E +E RK R A + + GA D Q ELSGLGL YK+ G E+EL+W T E N G+ VQKR A++EEW VASY+DWAPLNSKG GGG YT +DP +E G W+YRI DV+ G LCQAL++VQ+ E + + GFA + G + AG LDP+
Sbjct: 90 MFNENGVAYAPWMVNQIDEEAYVTAKELRKMRKNAQKAADASKEGAYFTTDLQADELSGLGLNYKLNGEEVELSWSTDTEPDNLGYKVQKRAARSEEWFTVASYEDWAPLNSKGKGGGTYTLIDPESETGDWIYRIVDVDRAGRNTVLCQALVEVQSQGEKVLSTVLAVGFAAIFSGFMAAGGLLDPI 277
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A1Z5K495_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K495_FISSO) HSP 1 Score: 166 bits (419), Expect = 3.630e-45 Identity = 91/248 (36.69%), Postives = 144/248 (58.06%), Query Frame = 2
Query: 23 LALVLGLGDAFAPAIARNVVSISAQRSCRAARALQMTKGGDVDEETRANPNKGRKGPTWMYNQEGRSLAPWME-DQFDPENLARVEESRKRRAAAAQERTKNAVGALAEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPMQ 763
LAL++G AFAP V S A + + T +++E + K ++ + N+ G APWM+ D + + +V + +E+ G+L D ELSG GLKYK++ G +EL W TG+E+ +GF+V++R AKTE++ +ASY ++ PL SKG+ GG+Y F+D E G WVYR+++ + +GS+NDL Q L+++QT E M K+A GF ++ + V+AGA +DP+Q
Sbjct: 10 LALLIGQSAAFAPL--PRVSSSVATKPQSTTVCFEKTLEEEIEEMVQQELKKTKRMSN-LRNERGIEYAPWMKITAEDEKEIRKVMRDKAEARRKRKEQETQVQGSLLRDSAFQELSGTGLKYKVIDGAVELEWTTGEESNTQGFIVKRRPAKTEKFEVLASYANYGPLQSKGSSGGVYRFLDDQVEPGGWVYRVTEKDKNGSENDLSQCLVEIQTNEEQMATKVAAIGFGVLAVAAVVAGALIDPLQ 254
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: B8BXV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV5_THAPS) HSP 1 Score: 162 bits (411), Expect = 4.370e-44 Identity = 87/191 (45.55%), Postives = 114/191 (59.69%), Query Frame = 2
Query: 200 MYNQEGRSLAPWMEDQFDPENLARV---EESRKRRAAAAQERTKNAVGALAEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPMQ 763
+ N+ G APWM D EN R E + RRA Q R + G L D Q ELSG GL YK++ GE+EL W T E KGF+V++R AKT ++ +ASYKDW PL SKG GGIY ++D + G WVYR+S+ +S G++ D+CQ L++VQT E Q +A GFA+ + VIAG DPM
Sbjct: 56 LRNENGVDYAPWMGISEDDENKIRALMKERTAARRARELQAR--DVTGNLFRDSQAQELSGTGLSYKIIDGEVELEWATKSEMDTKGFIVKRRAAKTNDYDVIASYKDWGPLASKGKEGGIYRYLDSTATPGGWVYRVSEEDSMGNQADICQCLVEVQTEDEQKQALIAGVGFAVFAVVAVIAGIAADPMN 244
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A6U3NNR7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NNR7_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.030e-43 Identity = 87/190 (45.79%), Postives = 116/190 (61.05%), Query Frame = 2
Query: 200 MYNQEGRSLAPWMEDQFDPENLARV---EESRKRRAAAAQERTKNAVGALAEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPM 760
+ N G APWM D E R E++ RRA QER+ + G L D Q ELSG GL YK++ G++EL W T E GF+V++R AKTEE+ +ASY+DW PL+S+GA GGIY ++D + G WVYRI++ ++ G+ DLCQ L+DVQT E +A GFA+ I V+AG LDPM
Sbjct: 87 LRNANGVDYAPWMGISADDETKIRQLMKEKTAARRAREEQERSVS--GNLYFDSQAQELSGTGLNYKVIDGQVELEWATKQERNTAGFIVKRRPAKTEEFTTLASYEDWGPLSSQGADGGIYRYLDETVSPGGWVYRITECDASGNNADLCQCLVDVQTEEEQRGAIIAGVGFAVFAIAAVVAGIALDPM 274
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A7S0AF72_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AF72_9STRA) HSP 1 Score: 156 bits (394), Expect = 8.270e-43 Identity = 75/147 (51.02%), Postives = 98/147 (66.67%), Query Frame = 2
Query: 320 KNAVGALAEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPM 760
K+ G L D Q ELSG GL YK++GGE+EL W T E+G KGF+V++R AKTEE+ +ASY DW PL SKGA GG+Y ++D + G WVYRIS+ ++ G + DLCQ L+DVQT E +A GF + V+AG TLDP+
Sbjct: 2 KSVSGNLYLDSQAQELSGTGLNYKVIGGEVELEWATKSESGTKGFIVKRRPAKTEEFSVIASYADWGPLQSKGADGGVYRYLDDTASPGGWVYRISECDNAGIEADLCQCLVDVQTEDEQRAAIIAAVGFVAFGVIAVVAGLTLDPL 148
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Match: A0A7S2KUZ9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KUZ9_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.910e-42 Identity = 85/191 (44.50%), Postives = 114/191 (59.69%), Query Frame = 2
Query: 200 MYNQEGRSLAPWMEDQFDPENLARV---EESRKRRAAAAQERTKNAVGALAEDPQQMELSGLGLKYKMVGGEIELTWKTGDETGNKGFVVQKRRAKTEEWVQVASYKDWAPLNSKGAGGGIYTFMDPSTEEGAWVYRISDVNSDGSKNDLCQALIDVQTPAEAMQVKLAVAGFALVVIGTVIAGATLDPMQ 763
+ N+ G APWM EN R E++ RR QER + G L D Q ELSG GL YK++ GE+EL W T E+ KGF+V++R AKT ++ +ASYKDW PL SKG GG+Y F+D + G WVYRIS+ + G++ D+CQ L++VQT E +A GFAL + V+AG +DPM
Sbjct: 95 LRNENGVEFAPWMGISEADENSIRALMREKTEARRKRQEQER--DVSGNLFRDSQAQELSGTGLTYKIIDGEVELEWATKSESDTKGFIVKRRVAKTNDYTVIASYKDWGPLASKGKEGGVYRFLDTTAGPGGWVYRISEEDKFGNEADICQCLVEVQTEDEQKAALIAGVGFALFAVVAVVAGIAVDPMN 283 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2002.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2002.1.2 >prot_P-wetherbeei_contig2002.1.2 ID=prot_P-wetherbeei_contig2002.1.2|Name=mRNA_P-wetherbeei_contig2002.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp MTKGGDVDEETRANPNKGRKGPTWMYNQEGRSLAPWMEDQFDPENLARVEback to top mRNA from alignment at P-wetherbeei_contig2002:249..2820+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2002.1.2 ID=mRNA_P-wetherbeei_contig2002.1.2|Name=mRNA_P-wetherbeei_contig2002.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2572bp|location=Sequence derived from alignment at P-wetherbeei_contig2002:249..2820+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2002:249..2820+ >mRNA_P-wetherbeei_contig2002.1.2 ID=mRNA_P-wetherbeei_contig2002.1.2|Name=mRNA_P-wetherbeei_contig2002.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig2002:249..2820+ (Phaeothamnion wetherbeei SAG_119_79)back to top |