mRNA_P-wetherbeei_contig19963.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19963.1.1
Unique NamemRNA_P-wetherbeei_contig19963.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: A0A7S9CSB2_9BRAD (HTH luxR-type domain-containing protein n=1 Tax=Bradyrhizobium genosp. L TaxID=83637 RepID=A0A7S9CSB2_9BRAD)

HSP 1 Score: 134 bits (337), Expect = 3.090e-32
Identity = 102/367 (27.79%), Postives = 176/367 (47.96%), Query Frame = 1
Query:    4 NQHEQLLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADL--HLLDDDVLRCNYMGMQPREVLEEYAEKFLDREPRSLSLRQLAPGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAPSEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTRRNLRGGATIVHGAGQRALCVTVDATSEEFRQRTGA------AAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            N  E+LL+L    YDAA D + WSDVL  VA    +V   L   ++ +  +  N+  +   E L  Y E+++ R P SL + Q   G ++   ++     ++   +Y + L    + H    +  K++     F +      G   E  +AL++ + PH+ RA+   FR+   +        ALDR++ G+ +L+ + R++L+N AA+ L +   PL+L    ++A   + +R+L  LIQ A+ R       ++ H    R + + V +       R  A      A  +++ D  A P    A  L D++ LT AE R A+G A G  + ++ARQ G++  + +  L+ V+ K GV  Q EL  L+
Sbjct:    6 NLPERLLDL---IYDAAADETLWSDVLVHVAQLTASVNGVLFGQVVGESKVYFNHHTLSREECLRAYRERYV-RNPYSLYMDQQLKGAMVRSDEVTTLSELKKTGFYHEVLRPQQVAHAAMVSLAKQSGFTVVFHLCRGERQGPFEEQQMALLRRLLPHMRRAIDLGFRLEQYKSLQRENAPALDRLAAGIIVLDRSARIILANKAARLLGSADGPLRLRNGMVSAFAVSAARRLDDLIQ-AVLRGQPTATMSMPHPDDGRLITLFVSSVRSRDIDRLRALNPQQAAVMIFVLD-PAGPAELPAASLMDIWQLTQAEARAALGAARGLGIAQIARQLGISPNTVKTHLRHVFAKTGVRSQVELAGLV 366          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: A0A4Q7G6A6_9BRAD (Helix-turn-helix transcriptional regulator n=5 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A4Q7G6A6_9BRAD)

HSP 1 Score: 125 bits (313), Expect = 5.780e-29
Identity = 111/373 (29.76%), Postives = 168/373 (45.04%), Query Frame = 1
Query:    1 MNQHEQLLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVLRCNYMGMQPREVLEEYAEKFLDREPRSLSLRQLA---PGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAPSEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTA-----TVPAESRKLQMLIQYALTRRNLRGGATIVH----GAGQRALCVTVDATSEEFRQ-RTGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            M+ H  LL      Y +A +PS W   L  +A CL  VGA L    DD             + EEY  ++  R+ R++  R+        V+TD            P+Y++ L + GL +  AAT   +A+      +  A +    S+  L LV  +  H+ R++    R+MD+EL       AL R+  GV +L+  GR++ SN  A++L   G  L++V+E L A       PA S  ++ L  Y            IVH    G       + V   +    Q  T A   + + D       D +  +RD+ GLT  E R+   +  G+  R+ A + G+T ESAR  LKRV+ K+GV +QGEL AL+
Sbjct:    1 MSHH--LLKAIDAIYQSAAEPSHWPVALQSIADCLDDVGAILLYGRDDGSFGAIQSASLDVIAEEYMREWTFRDIRAIRARERGYFFNRDVLTDXXXXXXXXXXTDPFYSELLRKHGLKYFAAATVSPDAKIEVAMSIQRASSKPVYSDAELDLVAQLGRHVERSLRLGIRLMDSELSKLGLGAALARLGTGVFVLDSVGRVIFSNPKAESLLGDG--LEIVEEKLAAGSLALNSPA-SAAMKRLAAYRAEDVLAGEKPIIVHRRTSGRPLALYVLPVSMAANSINQFLTQARLLILVVDPDNSSPPDPSL-IRDVLGLTLGEARVTALVGTGQSPRDAADKLGITEESARTILKRVFSKVGVSRQGELAALL 367          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: UPI001BCC29E3 (helix-turn-helix transcriptional regulator n=1 Tax=Bradyrhizobium sp. sBnM-33 TaxID=2831780 RepID=UPI001BCC29E3)

HSP 1 Score: 124 bits (311), Expect = 1.250e-28
Identity = 111/372 (29.84%), Postives = 164/372 (44.09%), Query Frame = 1
Query:   13 EQLLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVLRCNYMGMQPREVLEEYAEK-FLDREPRSLSLRQLA---PGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAP-SEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALT--RRNL--RGGATIVHGAGQRALCV-------TVDATSEEFRQRTGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            ++LL      Y+AA DPS W   L  +A C G VGA L    DD      +     +   +Y E  + +R+ R+    +      G  ITD  + +   +RN P Y  FL + GLG         E        V    +  +  S+D L L+  +  H+ +++    R++DAEL      +AL R+  GV  L+  GR++ SN A + L   G  L LVQ+ L     +    +   I + L   R +L       +VH        V       T  + +EEF   T A   V    L   P       +RD+ GLT  E RIA  + +G P RE A + G+  ++AR  LKRV+ K+GV +Q ELV L+
Sbjct:    8 DRLLTAVDAIYEAATDPSKWPAALGAIADCFGDVGAVLVWRRDDGSFGTIVSDTLIDAQRDYEESGWANRDIRATRATERGYFFNGVPITDRHLCSPDEIRNDPCYTQFLAKQGLGWVAGIAVSPEPHVGVLVSVQRDSSRKSEFSDDELGLLVIIGRHIEKSLRLSIRLLDAELTRLGLGEALARIGIGVFSLDSLGRVVFSNPAGRRLI--GDELHLVQDRLRIGSGSTREAIDEAITHTLRGYRHDLVAEPKPLLVHSLNSNRRLVIYLLPIGTRTSLAEEFLTNTRAIVLVIEQKLDEPP---DPTLVRDVLGLTLGEARIAALVGSGLPPREAAERLGIAEDTARNLLKRVFSKVGVSRQSELVGLL 374          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: A0A3L7A4I9_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Xanthobacter tagetidis TaxID=60216 RepID=A0A3L7A4I9_9HYPH)

HSP 1 Score: 122 bits (305), Expect = 7.800e-28
Identity = 108/365 (29.59%), Postives = 172/365 (47.12%), Query Frame = 1
Query:   19 LLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVLRCNYMGMQPREVLEEYAEKFLDREPRSLSL--RQLAPGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAA-TPLKEARHRAYFGVHLAPASGAPSEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTRRNLRGGATIV-----HGAGQ---RALCVTVDATSEEFRQRTGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            LL++    Y AAL+P  W   L  ++  LGA+G  +  L  D            E   +Y + +   +  S+ +  R L PG V TD  ++    +   P+Y DFL R G+   +AA  PL + R  +  GV  +       ++ +A +  + PHLGRA++    +++A   +     AL  ++ GV +LN AG +   N  A++L   G  L +    ++A    +  +LQ  I  AL        A  V      G G     A+ +     + E        A + I  L A P R  A  L+DM GLTPAE ++A  +  G  +R+VA   G++YE+AR  L+ ++ KLG+ +QGELVA++
Sbjct:    6 LLSVVDSVYAAALEPERWQQALGDLSLALGALGTTMIPLGTDGPLVGLASDSLAEANVDYQQGWWRHDTPSMRVVQRGLKPGIVGTDRVVMTEEEIARDPFYQDFLRRHGIRQTMAAIAPLGQGRLLS-IGVQRSVKRDLFQDEDVAALARLAPHLGRAIAVTAALVEARRMSADVAVALAHLAWGVVMLNAAGDVRHVNAVAESLLGDG--LLVAGRRVSAAGRDDDARLQGAIGAALPDGGGLPAAKAVLVRRPSGKGWLMVEAVPIRPRLDALEIITFGAGGALLLIRALDAAP-RAVAPLLQDM-GLTPAEAKLAEALGQGGALRDVAAAGGISYETARSHLRAIFGKLGISRQGELVAIV 365          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: A0A6N8DKA0_RHOAC (Helix-turn-helix transcriptional regulator n=1 Tax=Rhodoblastus acidophilus TaxID=1074 RepID=A0A6N8DKA0_RHOAC)

HSP 1 Score: 122 bits (305), Expect = 7.800e-28
Identity = 108/369 (29.27%), Postives = 162/369 (43.90%), Query Frame = 1
Query:   10 HEQLLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVLRCNYMGMQPREVLEEYAEKFLD----REPRSLSLRQLAPGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAPSEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTRRNLRGGAT----IVHGAGQRALCVTVDATSEEFRQR----TGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            +E+ +      Y+AA +P++W + L  +A C   VGA L    DD            E  ++YAE        R  R++         V+ D  +++   M   P+Y DFL R GL  C A     + +  A   +       A S+  + ++  +  H+  A+    R++DAEL      +A +RV+ G+ +L+   R++ SN A + L   G  L +V   L A   AE + LQ  I   L        A     ++     R L V V   S     R    T A A V   D  A    D A  +RD+ GLT  E RIA  +  G   ++ A + GVT E+AR  LKRV+ K+GV +Q EL  L+
Sbjct:    2 NERFVTAVEAIYNAAPNPASWPEALQAMADCFNDVGAVLLWHRDDGSFGVIASPGLAEAQKDYAENGWSLRDTRSIRAIEQSYWVRTDVVCDRDVISEQEMNKDPFYRDFLARYGLKWCAAVGVSPDPQVAAAVSIQRVSGKPAYSDAEIEMLGKLGRHVESALRLSLRLLDAELVKDSLGEAFNRVNIGIFVLDSLSRVIFSNLAGRDLSDAG--LSVVDARLQAPSGAEQKALQAAIAATLRTAAPDLAAPPKPILIQRENSRTLVVYVMPVSNAPDPRQAFLTHARAIVLAIDPDADAPADPAV-VRDLLGLTLGEARIAALVGHGMAPKDAAGRLGVTEETARTVLKRVFAKVGVSRQSELSTLL 367          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: A0A1I5XYN1_9BRAD (DNA-binding transcriptional regulator, CsgD family n=1 Tax=Bradyrhizobium sp. Ghvi TaxID=1855319 RepID=A0A1I5XYN1_9BRAD)

HSP 1 Score: 120 bits (301), Expect = 3.140e-27
Identity = 114/378 (30.16%), Postives = 165/378 (43.65%), Query Frame = 1
Query:   19 LLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVLRCNYMGMQPREVLEEYAEKFLDREP----RSLSLRQLAPGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAP--SEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTRRNLRGGA---------TIVH--GAGQRALCVTVDATS-----EEFRQRTGAA--AYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            LLN     YDAA DPS W   L  +A C G VGA L    DD      +     E   +Y E    R      R++       G+      +V+   + +HP++  F  + GLG  +    +    H     + L   +G P  S+  L  V+ +  H+ +++    R++DAEL      +AL R+  GV  L+  GR++ SN A Q L   G  L++VQ  L      E   +   I      R LRG            +VH  GA +R +   +   S     E+F   T     A     D  A P       +RD+ GLT  E RIA  + AG P +E A + G+  E+AR  LKRV+ K+GV +Q ELVA++
Sbjct:   10 LLNAIEAIYDAAPDPSQWPRALGMIADCFGDVGALLMWRRDDGSYGTIVSASLVEAQRDYEESGWTRRDIAAIRAMESGYFFNGEPYASRHLVSKDEISDHPFFVQFRAQHGLG-TLGGVAVSPDPHVGVL-LSLQGHAGRPEYSDAELETVRRIGRHVEKSLRLTIRLLDAELAKVGLGEALARIGIGVFALDSLGRVVFSNPAGQRLI--GDQLQIVQGRLRIGSGTERTAIDEAIA-----RTLRGDPHHLIGDPKPVLVHSIGASRRLVVYLLPIASRASLAEKFLTHTRGIVLAIEQKLDEPADPA-----VVRDVLGLTLGEARIAALVGAGLPPKEAAERLGIAEETARTVLKRVFSKVGVSRQSELVAVL 373          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: A0A7V7XBP0_9BURK (Helix-turn-helix transcriptional regulator n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7V7XBP0_9BURK)

HSP 1 Score: 120 bits (300), Expect = 3.820e-27
Identity = 105/364 (28.85%), Postives = 161/364 (44.23%), Query Frame = 1
Query:   28 LCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDD-------VLRCNYMGMQPREVLEEYAEKFLDREPRSLSLRQLAPGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAP-SEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTRRNLRGGATIVHGAGQRALCVTV---DATSEEFRQRTGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALIQA 1086
            + G FYD  L P AW   +  + A L A       L +        V      G+  R  + EY  +    +PR  +  ++A G V+ D +  +A     +P YAD+L  +GL H        E   R +    + P    P S D    ++ + P + RA   + RM+      H+   AL  +   +A+++   R+  +N A +   A    L +    L     A   +LQ L   A  R   R GA IV  + +  L +TV    AT     Q   A A V +T   A    DH   +  M GL+PAETR+A+ +AAG+ V++ A   G+++ +AR   K +  K G H+Q ELVAL+Q+
Sbjct:    8 IAGLFYDGVLQPQAWHTAMDTMRARLQAGVFHSFTLSESSAPAPESVGNLEQFGLHARH-MAEYETQHAGNDPRLAATLRIATGGVMLDHEHFSAREALRNPVYADWLIPLGLKHTAGVVIRHEGSARDFISF-MRPRDAKPYSADDKRFIEQLVPDIARAAKLRARMVTLSRHAHLGMAALGSLRQCIAVVDAQCRIQHANAAMEQRLATPGALGVRHGRLQCAQAAAHTQLQHLAMAACMRPG-RAGAFIVQESNRPTLAITVLPLQATHAWSGQGEAAMALVVVTLPSAATALDH-HLVGSMLGLSPAETRLALLLAAGKTVKDFAAIEGMSWHTARSHTKNLLRKTGCHRQTELVALLQS 367          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: UPI00106DB121 (hypothetical protein n=1 Tax=Microvirga pakistanensis TaxID=1682650 RepID=UPI00106DB121)

HSP 1 Score: 119 bits (298), Expect = 7.780e-27
Identity = 98/369 (26.56%), Postives = 164/369 (44.44%), Query Frame = 1
Query:   19 LLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVLRCNYMGMQPREVLEEYAEKFLD---REPRSLSLRQLAPGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAPSEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTRRNLRGGATIVH---------GAGQRALCVTVDATSEE---FRQRTGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            LL      Y AALDP  W D L+ +    G +GA +  +               E  ++Y +++     R  R L+ R ++ G +ITD  +++  T+R+HP+  +FL    LG  +    +  +R     G+H     G+  +   A    + PH  RA++A   + +    + +   ALDR++CGV +LN  G ++  N  AQ++   G    +    L A    + + L  LI  AL      G AT+V          G  Q+     V  +  E   F Q       + + +  + P  +  Q+     GLT  + R+A  + +G   +E A Q G+T  + R  LK VY++L + +QG+LVAL+
Sbjct:    6 LLTTIDAIYAAALDPERWPDALSHMTQVAGGIGAVIVPVAATAKMVTISSSSLDEANQDYGQEWWRYDVRNERGLA-RGISEG-LITDADLLDEETLRSHPFCQEFLRPHNLGAYMGYATVLPSRQVITVGIHRDLRRGSFEKADEASFARLAPHAARALAAAAEIAEGRRASRLLGGALDRLTCGVILLNAHGSVVSINEVAQSMLGTG--FNVSGGRLKAATARDQKALDALIISALP-----GHATLVRPPLVLARQAGGEQKVFIQAVPISGNEHTGFEQLALRPGVLMLVNGLSAPAAEVLQERLIRLGLTKGQARVAAAVGSGLSSKEAAEQLGLTDGTIRTVLKVVYQRLDISRQGQLVALV 365          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: A0A7W2EX32_9BURK (Helix-turn-helix transcriptional regulator n=1 Tax=Duganella sp. LX20W TaxID=2758569 RepID=A0A7W2EX32_9BURK)

HSP 1 Score: 120 bits (300), Expect = 8.050e-27
Identity = 101/367 (27.52%), Postives = 162/367 (44.14%), Query Frame = 1
Query:    4 NQHEQLLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDD--DVLRCNYMGMQPREVLEEYAEKFLDREPRSLSLRQLAPGQVITDLQIVNAHTMRNHPYYADFLPRIGLGHCIAAT-PLKEARHRAYFGVHLAPASGAPSEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTR--RNLRGGATIVHGAGQRALCVTVDATSEEFRQRTGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALIQAA 1089
            N  ++ L+L    Y+AA+ P  W  + AR+AA  GA  A L LLD+       ++       +  +Y + F   +  +   R+L  G+V +  ++V         YYADF    G+ + + A  PL   RH A  G+H    +G    D    + A+ PHL RA+  + R+  A L       AL        +++    ++ +  +A AL A   PL+L+   L+ATV      L  L++ AL    R  R  +  +   G   L +TV           G+     +           A  LR ++ LTPAE  +A  +A G  + + A   G++  + +  L+RVY K G  +QGELVAL+  +
Sbjct:    7 NLRQRQLDLVEQIYEAAMGPPHWRGLCARLAAAFGADSAVLALLDERGPARVLDHSANFTAAMQSQYEQHFCHEDLWARRARELGAGRVYSSAELVADADFMRSSYYADFCRPAGIFYVVGALLPLAPRRH-AVLGIHRPRRAGHYDRDAQRQLAALLPHLQRALRLELRLEQAGLALRCDEAALASARVAAIVVDAELTVLHATDSAAALLAPASPLRLLHGRLSATVAPGGASLAQLVRAALPGPGRAPRAQSCCLPRHGLAPLTLTV----APLPAPAGSVPRALLLLRATEQATVDASALRQLYQLTPAEADVAKALAEGGSLEQHALARGISMNTIKTHLQRVYAKTGACRQGELVALLHGS 368          
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Match: UPI001CE2981F (helix-turn-helix transcriptional regulator n=2 Tax=Bradyrhizobium sp. WSM 1704 TaxID=2821404 RepID=UPI001CE2981F)

HSP 1 Score: 118 bits (296), Expect = 1.580e-26
Identity = 118/386 (30.57%), Postives = 171/386 (44.30%), Query Frame = 1
Query:   16 QLLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVLRCNYMGMQPREVLEEYAEKFLDREPRSLSLRQLA---PGQVITDLQIVNAHTMRNHPYYADFLPRIGLGH--CIAATPLKEARHRAYFGVHLA--------PASGAPSEDMLALVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLMLSNTAAQALFAHGQPLKLVQEHLT--ATVPAESRKLQMLIQYALTRRNLRGGA---------TIVHGAGQRALCVTV-------DATSEEFRQRTGAAAYVYITDLHARPCRDHAQQLRDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGVHKQGELVALI 1080
            ++L      YDAA DPS W   L  +A C G VGA L    +D      +         +Y + +  R+ R++   +      G    D  I +   +R  P Y DFL R  LG    +A +P ++       GV L         P    P  D+LA +     H+ +A+    R++DAEL N    DAL RV  GV  L+  GR++ SN A + L   G  L++VQ+ L   A +  E      +I  AL R  LRG            +V   G  +  V            +E+F   T   A V   +       D A  +RD+ GLT  E RIA  + +G P +E A + G++ E+AR  LKRV+ K+GV +Q ELVA++
Sbjct:    9 RILRAVEAIYDAAPDPSQWPRALGAIADCFGDVGALLIWHRNDGSYGTMVSESLARAQRDYEDNWRHRDIRAIRATERGYFFSGVPFADRHICSDEEIRTDPCYRDFLVRHRLGWFGAVAVSPNRD------IGVMLTIQRDSRQKPQFSDPELDLLARIGR---HIEKALRLSIRLLDAELTNLGLGDALARVGIGVFALDSLGRVVFSNPAGERLL--GDQLQIVQDRLRIGAGIARE------VIDEALGRA-LRGDPRELIDNQKPVLVRPVGTHSRLVVYLLPVGLRSNLAEQFLTHT--RAIVLAIEQRLDEPADPAV-VRDVLGLTLGEARIAALVGSGLPPKEAAERLGISDETARTVLKRVFSKVGVSRQSELVAIL 373          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19963.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S9CSB2_9BRAD3.090e-3227.79HTH luxR-type domain-containing protein n=1 Tax=Br... [more]
A0A4Q7G6A6_9BRAD5.780e-2929.76Helix-turn-helix transcriptional regulator n=5 Tax... [more]
UPI001BCC29E31.250e-2829.84helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A3L7A4I9_9HYPH7.800e-2829.59HTH luxR-type domain-containing protein n=1 Tax=Xa... [more]
A0A6N8DKA0_RHOAC7.800e-2829.27Helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A1I5XYN1_9BRAD3.140e-2730.16DNA-binding transcriptional regulator, CsgD family... [more]
A0A7V7XBP0_9BURK3.820e-2728.85Helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI00106DB1217.780e-2726.56hypothetical protein n=1 Tax=Microvirga pakistanen... [more]
A0A7W2EX32_9BURK8.050e-2727.52Helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI001CE2981F1.580e-2630.57helix-turn-helix transcriptional regulator n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19963contigP-wetherbeei_contig19963:1..1095 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog709797.CSIRO_3511
PFAMsGerE
Model size1095
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.6e-36
EggNOG OGsCOG2771@1|root,COG2771@2|Bacteria,1R5D9@1224|Proteobacteria,2U0B5@28211|Alphaproteobacteria,3JWCE@41294|Bradyrhizobiaceae
Descriptionhelix_turn_helix, Lux Regulon
Cds size1095
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186186.3194075-CDS-P-wetherbeei_contig19963:0..10951683186186.3194075-CDS-P-wetherbeei_contig19963:0..1095Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19963 1..1095 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19963.1.1prot_P-wetherbeei_contig19963.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19963 1..1095 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19963.1.1

>prot_P-wetherbeei_contig19963.1.1 ID=prot_P-wetherbeei_contig19963.1.1|Name=mRNA_P-wetherbeei_contig19963.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=365bp
MNQHEQLLNLCGGFYDAALDPSAWSDVLARVAACLGAVGADLHLLDDDVL
RCNYMGMQPREVLEEYAEKFLDREPRSLSLRQLAPGQVITDLQIVNAHTM
RNHPYYADFLPRIGLGHCIAATPLKEARHRAYFGVHLAPASGAPSEDMLA
LVKAMQPHLGRAVSAQFRMMDAELRNHVYTDALDRVSCGVAILNGAGRLM
LSNTAAQALFAHGQPLKLVQEHLTATVPAESRKLQMLIQYALTRRNLRGG
ATIVHGAGQRALCVTVDATSEEFRQRTGAAAYVYITDLHARPCRDHAQQL
RDMFGLTPAETRIAIGIAAGEPVREVARQAGVTYESARFTLKRVYEKLGV
HKQGELVALIQAALP
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mRNA from alignment at P-wetherbeei_contig19963:1..1095-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19963.1.1 ID=mRNA_P-wetherbeei_contig19963.1.1|Name=mRNA_P-wetherbeei_contig19963.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1095bp|location=Sequence derived from alignment at P-wetherbeei_contig19963:1..1095- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACCAGCACGAGCAATTGCTGAACCTGTGTGGGGGCTTCTACGACGC GGCCCTCGACCCATCCGCGTGGTCGGATGTATTGGCGCGGGTCGCAGCTT GCCTGGGCGCGGTCGGCGCCGATCTGCACCTGCTCGACGACGATGTCCTG CGCTGCAACTACATGGGCATGCAACCGCGCGAAGTGCTGGAGGAATACGC CGAGAAATTTCTCGACCGTGAGCCGCGCTCGCTGAGCTTGCGGCAACTGG CGCCCGGTCAGGTCATCACTGATCTGCAGATTGTCAACGCGCACACCATG CGCAATCACCCCTACTACGCCGACTTCCTGCCGCGTATCGGCCTCGGCCA TTGCATCGCTGCGACGCCACTCAAGGAGGCGCGCCATCGTGCCTATTTCG GTGTGCACCTGGCGCCGGCCAGCGGCGCGCCGAGTGAGGACATGCTGGCG CTGGTGAAAGCCATGCAGCCGCACCTCGGTCGCGCGGTCAGCGCGCAGTT CCGCATGATGGACGCCGAGCTGCGCAACCATGTCTATACCGATGCATTGG ACCGTGTCAGTTGTGGGGTCGCGATTCTGAATGGCGCGGGCAGGTTGATG CTGAGCAATACCGCCGCCCAAGCGCTGTTTGCGCACGGCCAGCCCTTGAA ACTGGTGCAGGAACACCTGACGGCCACCGTCCCCGCCGAGTCGCGCAAAC TGCAGATGCTGATCCAATACGCGCTGACACGGCGCAACCTGCGCGGCGGT GCGACCATTGTGCATGGCGCGGGTCAGCGCGCCCTGTGTGTGACGGTAGA CGCCACCAGCGAAGAGTTCCGCCAACGCACCGGTGCTGCGGCCTATGTCT ACATCACCGACCTCCACGCCCGTCCGTGCCGTGACCATGCGCAACAACTG CGCGATATGTTCGGTTTAACGCCGGCCGAGACCCGTATCGCGATAGGTAT CGCCGCGGGCGAACCTGTGCGTGAGGTCGCTAGGCAAGCCGGCGTGACCT ATGAGAGCGCGCGCTTCACCTTGAAGCGCGTCTACGAAAAACTCGGCGTG CACAAACAAGGGGAACTGGTAGCGCTGATCCAGGCCGCCCTGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19963:1..1095-

>mRNA_P-wetherbeei_contig19963.1.1 ID=mRNA_P-wetherbeei_contig19963.1.1|Name=mRNA_P-wetherbeei_contig19963.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1095bp|location=Sequence derived from alignment at P-wetherbeei_contig19963:1..1095- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACCAGCACGAGCAATTGCTGAACCTGTGTGGGGGCTTCTACGACGC
GGCCCTCGACCCATCCGCGTGGTCGGATGTATTGGCGCGGGTCGCAGCTT
GCCTGGGCGCGGTCGGCGCCGATCTGCACCTGCTCGACGACGATGTCCTG
CGCTGCAACTACATGGGCATGCAACCGCGCGAAGTGCTGGAGGAATACGC
CGAGAAATTTCTCGACCGTGAGCCGCGCTCGCTGAGCTTGCGGCAACTGG
CGCCCGGTCAGGTCATCACTGATCTGCAGATTGTCAACGCGCACACCATG
CGCAATCACCCCTACTACGCCGACTTCCTGCCGCGTATCGGCCTCGGCCA
TTGCATCGCTGCGACGCCACTCAAGGAGGCGCGCCATCGTGCCTATTTCG
GTGTGCACCTGGCGCCGGCCAGCGGCGCGCCGAGTGAGGACATGCTGGCG
CTGGTGAAAGCCATGCAGCCGCACCTCGGTCGCGCGGTCAGCGCGCAGTT
CCGCATGATGGACGCCGAGCTGCGCAACCATGTCTATACCGATGCATTGG
ACCGTGTCAGTTGTGGGGTCGCGATTCTGAATGGCGCGGGCAGGTTGATG
CTGAGCAATACCGCCGCCCAAGCGCTGTTTGCGCACGGCCAGCCCTTGAA
ACTGGTGCAGGAACACCTGACGGCCACCGTCCCCGCCGAGTCGCGCAAAC
TGCAGATGCTGATCCAATACGCGCTGACACGGCGCAACCTGCGCGGCGGT
GCGACCATTGTGCATGGCGCGGGTCAGCGCGCCCTGTGTGTGACGGTAGA
CGCCACCAGCGAAGAGTTCCGCCAACGCACCGGTGCTGCGGCCTATGTCT
ACATCACCGACCTCCACGCCCGTCCGTGCCGTGACCATGCGCAACAACTG
CGCGATATGTTCGGTTTAACGCCGGCCGAGACCCGTATCGCGATAGGTAT
CGCCGCGGGCGAACCTGTGCGTGAGGTCGCTAGGCAAGCCGGCGTGACCT
ATGAGAGCGCGCGCTTCACCTTGAAGCGCGTCTACGAAAAACTCGGCGTG
CACAAACAAGGGGAACTGGTAGCGCTGATCCAGGCCGCCCTGCCG
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