prot_P-wetherbeei_contig19899.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19899.1.1
Unique Nameprot_P-wetherbeei_contig19899.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length284
Homology
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A835ZDJ4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ4_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.990e-55
Identity = 103/167 (61.68%), Postives = 125/167 (74.85%), Query Frame = 0
Query:  110 ITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQIAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            +T+DRF  L ++A  K+ +     YE MT+VQ+A IP  L G D LAKAKTGTGKTLAFLIP VERA+R PRRAG I+VL+ISPTRELA QI +EA  L T   GM +QC+ GGTNIK+DLR L+D  P +LVATPGRLNDHLENQ +A  L+ L  L+ DEA+QL+
Sbjct:    1 MTSDRFESLPINADLKRGITQAMGYETMTKVQSATIPVSLTGVDILAKAKTGTGKTLAFLIPCVERALRSPRRAGGISVLIISPTRELAQQIHDEAA-LATRFMGMRLQCIFGGTNIKADLRKLSDATPDILVATPGRLNDHLENQTLARQLAGLSALVLDEADQLL 166          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: D8LUB6_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 6.240e-54
Identity = 106/181 (58.56%), Postives = 137/181 (75.69%), Query Frame = 0
Query:   97 NPSARTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGR-IAVLVISPTRELASQIAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            NP++RTS+TTM Q+T  +FA L +SAPT++A+A+V  Y  +T+VQ  +IP  L G D LAKAKTGTGKTL+FL PA+E   R PR   + I VL+ISPTRELA QIA+EA Q+LT+H  M + CVVGGTNIK+D+R   DRP  ++VATPGRLNDHL+N  +A  ++ L  LIFDEA+QL+
Sbjct:  128 NPNSRTSTTTMSQMTESKFAQLPLSAPTQRAIAEVLGYATLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLFPAIEGVARTPRAQRKGIWVLIISPTRELAQQIADEANQVLTFH-DMSLICVVGGTNIKADIRGFRDRPD-IVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLL 306          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A7S0YY46_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0YY46_9CRYP)

HSP 1 Score: 191 bits (486), Expect = 8.130e-54
Identity = 106/180 (58.89%), Postives = 133/180 (73.89%), Query Frame = 0
Query:   97 NPSARTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQIAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            N  +RTS+TTM Q+TT  F +L V   TK+++A+V  Y+ MT VQ  +IP  L G D LAKAKTGTGKTL+FLIPAVE  IR+P   G I+VL+ISPTRELA QI EEAK ++  HR + V C+VGGTN+  D++    RPP++LVATPGRLNDHLEN  +A L S+L  LIFDEA+QL+
Sbjct:   25 NAISRTSATTMSQMTTSAFDELQVHPLTKKSIAEVMRYQTMTIVQQQSIPVALTGVDLLAKAKTGTGKTLSFLIPAVEHVIRDPPVRG-ISVLIISPTRELAQQIEEEAKMVVQMHRTITVMCIVGGTNMNRDIQGFK-RPPSLLVATPGRLNDHLENSGLAQLCSQLRCLIFDEADQLL 202          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A7S0QEX6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QEX6_9CRYP)

HSP 1 Score: 187 bits (476), Expect = 2.440e-51
Identity = 106/176 (60.23%), Postives = 128/176 (72.73%), Query Frame = 0
Query:  101 RTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQIAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            RTSSTTM QIT +RF +L ++A +K+ALA+V  YE MT VQ A+IP+ L G D LAKAKTGTGKTLAFLIPAVE  +R P+  G I VL+ISPTRELA QI EEA QL     G+ VQC+VGGT    DL      PP +LVATPGRLNDHLEN  +  ++++L  LI DEA+QL+
Sbjct:  159 RTSSTTMSQITGNRFNELPINALSKRALAEVLRYEFMTLVQHASIPTSLTGVDVLAKAKTGTGKTLAFLIPAVEHILRAPKVQG-ICVLIISPTRELAQQIEEEANQLCKLQPGVRVQCIVGGTKPGRDLEGFR-HPPDILVATPGRLNDHLENNGLQRIVTQLRCLILDEADQLL 332          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A7S3XXC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXC6_HETAK)

HSP 1 Score: 182 bits (462), Expect = 8.290e-51
Identity = 106/190 (55.79%), Postives = 133/190 (70.00%), Query Frame = 0
Query:   90 AAPARPPNPSARTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPR--RAGRIAVLVISPTRELASQIAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQD-MAALLSELGTLIFDEAEQLV 276
            A P +  NP++RTSSTT+GQ+T  RFAD  ++  T++ALA+V  YE MTRVQA  +P  L G+D LAKAKTGTGKTL FL+PA+ER +  P   R GR++ LVISPTRELA QIAEEAKQLL +H  +G+Q V GGT +  D+ +   R P +LVATPGRL DHLEN        + L  LI DE +QL+
Sbjct:   78 AVPMQIVNPNSRTSSTTLGQLTDVRFADAPLAVGTQRALAEVLGYERMTRVQAQTLPVSLQGKDVLAKAKTGTGKTLGFLLPAIERILAAPAAARRGRVSALVISPTRELAQQIAEEAKQLLKFH-DLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLL 266          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A7S2X0C3_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2X0C3_9CHLO)

HSP 1 Score: 184 bits (468), Expect = 1.280e-50
Identity = 96/178 (53.93%), Postives = 127/178 (71.35%), Query Frame = 0
Query:  101 RTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQIAEEAKQLLTYH--RGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            RTS+TT+  +T  RFADL + A TK+A+ +V  Y C T VQ+ A+P CL   D + KAKTGTGKT+AFL+PA+E+A++ P   G+I +L ISPTRELA QIAEEA  L  +H      +QCVVGGTN+KSD+R L    P +LVATPGRLND  +N  + +++ +L  LIFDEA+QL+
Sbjct:   63 RTSATTLAHMTQVRFADLPIHASTKKAIREVMGYACCTEVQSQALPVCLGDSDAVVKAKTGTGKTIAFLVPAIEKALKSPVGRGQIPILAISPTRELAQQIAEEAMALTRFHGREVSRIQCVVGGTNVKSDIRKLKAAAPFILVATPGRLNDLFQNGGLDSMVRQLQVLIFDEADQLL 240          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A5B8MIP2_9CHLO (DEAD-box ATP-dependent RNA helicase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIP2_9CHLO)

HSP 1 Score: 184 bits (468), Expect = 1.540e-50
Identity = 96/178 (53.93%), Postives = 127/178 (71.35%), Query Frame = 0
Query:  101 RTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQIAEEAKQLLTYH--RGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            RTS+TT+  +T  RFADL + A TK+A+ +V  Y C T VQ+ A+P CL   D + KAKTGTGKT+AFL+PA+E+A++ P   G+I +L ISPTRELA QIAEEA  L  +H      +QCVVGGTN+KSD+R L    P +LVATPGRLND  +N  + +++ +L  LIFDEA+QL+
Sbjct:   87 RTSATTLAHMTQVRFADLPIHASTKKAIREVMGYACCTEVQSQALPVCLGDSDAVVKAKTGTGKTIAFLVPAIEKALKSPVGRGQIPILAISPTRELAQQIAEEAMALTRFHGREVSRIQCVVGGTNVKSDIRKLKAAAPFILVATPGRLNDLFQNGGLDSMVRQLQVLIFDEADQLL 264          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A7S3CBF8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CBF8_9CHLO)

HSP 1 Score: 183 bits (464), Expect = 1.940e-50
Identity = 100/185 (54.05%), Postives = 133/185 (71.89%), Query Frame = 0
Query:   95 PPNPSARTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQIAEEAKQLLTYHRGMGV---QCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            P + ++RTS+TT+  +T  +F DL V   TK+A+ +V  YE  T VQ+ A+P CL   D + KAKTGTGKT+AFL+PA+E+A++ P   G+I +L ISPTRELA QIAEEA  L  ++ G GV   QCVVGGTN+KSD+R L DR P VLVATPGRLND  +N  + +++ +L  LIFDEA+QL+
Sbjct:   34 PVHHNSRTSATTLAHMTQVKFDDLPVHVNTKRAIREVMGYEFCTEVQSQALPVCLGEADAVVKAKTGTGKTIAFLVPAIEKALKSPVDRGQIPILAISPTRELAQQIAEEASALTRFY-GAGVSRIQCVVGGTNVKSDIRKLRDRAPFVLVATPGRLNDLFQNGGLDSMVRQLRVLIFDEADQLL 217          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A6H5L2V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.480e-50
Identity = 99/171 (57.89%), Postives = 129/171 (75.44%), Query Frame = 0
Query:  107 MGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGR-IAVLVISPTRELASQIAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            M Q+T  +FA L +SAPT++A+A+V  Y  +T+VQ  +IP  L G D LAKAKTGTGKTL+FL+PA+E   R PR   + I+VL+ISPTRELA QIA+EA Q+LT+H  M + CVVGGTNIK+D+R   DRP  ++VATPGRLNDHL+N  +A  ++ L  LIFDEA+QL+
Sbjct:   38 MSQMTESKFAQLPLSAPTQRAIAEVLGYVTLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLLPAIEGVARTPRAQRKGISVLIISPTRELAQQIADEANQVLTFH-DMSLICVVGGTNIKADIRGFRDRPD-IVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLL 206          
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Match: A0A7S1J8E5_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J8E5_9EUGL)

HSP 1 Score: 181 bits (458), Expect = 1.170e-49
Identity = 103/170 (60.59%), Postives = 124/170 (72.94%), Query Frame = 0
Query:  107 MGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLPGEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQIAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLNDHLENQDMAALLSELGTLIFDEAEQLV 276
            M Q+T DRF  L + A TK+ALA+V  Y  MT+VQA  +P  L G D LAKAKTGTGKTLAFLIPA+E   +  R  G I  L+ISPTRELASQI EEAKQLLT+H+G+    V GGT IK DL AL   PP +LVATPGRLNDHLE+  + + +++L TLIFDEA+QL+
Sbjct:    1 MSQMTQDRFDALPLGAATKRALAEVLCYATMTKVQAETLPISLKGGDILAKAKTGTGKTLAFLIPAIEMMAQSARGQG-ILTLIISPTRELASQIEEEAKQLLTFHQGIRSLVVFGGTPIKRDLSAL-QTPPDLLVATPGRLNDHLEHSGIQSKITKLQTLIFDEADQLL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19899.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDJ4_9STRA2.990e-5561.68P-loop containing nucleoside triphosphate hydrolas... [more]
D8LUB6_ECTSI6.240e-5458.56DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S0YY46_9CRYP8.130e-5458.89Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0QEX6_9CRYP2.440e-5160.23Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S3XXC6_HETAK8.290e-5155.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2X0C3_9CHLO1.280e-5053.93Hypothetical protein n=1 Tax=Chloropicon primus Ta... [more]
A0A5B8MIP2_9CHLO1.540e-5053.93DEAD-box ATP-dependent RNA helicase n=1 Tax=Chloro... [more]
A0A7S3CBF8_9CHLO1.940e-5054.05Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A6H5L2V2_9PHAE2.480e-5057.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1J8E5_9EUGL1.170e-4960.59Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 133..281
e-value: 9.7E-15
score: 65.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 145..283
score: 18.563242
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 138..278
e-value: 2.4E-34
score: 118.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 98..282
e-value: 7.8E-51
score: 174.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 111..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..110
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 86..276
NoneNo IPR availablePANTHERPTHR24031:SF384ATP-DEPENDENT RNA HELICASE MSS116, MITOCHONDRIALcoord: 86..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19899contigP-wetherbeei_contig19899:34..1133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19899.1.1mRNA_P-wetherbeei_contig19899.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19899 3..1188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19899.1.1 ID=prot_P-wetherbeei_contig19899.1.1|Name=mRNA_P-wetherbeei_contig19899.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp
MSGFAQDGPGGQRRQQGNTSAPSNGAGQVSDHKRPTQGDAAPIGGGASKR
SRRSRGSRKGAGTAANGAAPQDPMDEEQQFAPGASVTPPAAPARPPNPSA
RTSSTTMGQITTDRFADLAVSAPTKQALADVFHYECMTRVQAAAIPSCLP
GEDCLAKAKTGTGKTLAFLIPAVERAIREPRRAGRIAVLVISPTRELASQ
IAEEAKQLLTYHRGMGVQCVVGGTNIKSDLRALADRPPTVLVATPGRLND
HLENQDMAALLSELGTLIFDEAEQLVRAERRKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase