mRNA_P-wetherbeei_contig19745.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19745.1.1
Unique NamemRNA_P-wetherbeei_contig19745.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A836CII9_9STRA (Ferredoxin--NADP(+) reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 1.880e-80
Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A + DPE+G++DPAKAGVCSNFL  AAAG+ V + GP GKIML+PE DP  D+I VGTGTGVAPYR FVRRLFQEDTPAARAY G AWLFLGVAN ++LLYH+D+ SVVRRFPFNFRYDVALSREQ+NRAGGKMYIQDK+EE+ADE+F++LDNG
Sbjct:  228 ALFTDPESGKQDPAKAGVCSNFLCDAAAGAAVSIAGPSGKIMLMPEQDPTTDIIMVGTGTGVAPYRGFVRRLFQEDTPAARAYTGQAWLFLGVANRDALLYHEDWLSVVRRFPFNFRYDVALSREQQNRAGGKMYIQDKMEEYADELFDKLDNG 381
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A6H5KHJ2_9PHAE (Ferredoxin--NADP(+) reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHJ2_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 6.210e-77
Identity = 114/154 (74.03%), Postives = 132/154 (85.71%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A  +DPETG+EDPAK GVCSNFL  A AG EV LTGP GKIMLLPE  P AD+I VGTGTG+APYR F++RLF+EDTPAARA+ G AWLFLGVA TE LLYHDD+  ++R+FPFNFRYD+ALSREQKN +GGKMYIQD+VE++ADE+FERLD G
Sbjct:  183 ATVLDPETGKEDPAKEGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFRYDLALSREQKNASGGKMYIQDRVEQYADEVFERLDGG 336
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A8J5XIC4_DIALT (Ferredoxin--NADP(+) reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIC4_DIALT)

HSP 1 Score: 226 bits (576), Expect = 5.120e-71
Identity = 107/154 (69.48%), Postives = 125/154 (81.17%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A YVDPETG+EDPAK GVCSNFL  +  G E+ +TGP GK+ML+PE DP  DLI V TGTG+APYR F+RRLF E TPAA AY G AWLFLGVAN++SLLY D++Q+  R FP NFR D ALSREQ N++GGKMYIQDKVEE+ADEIF +L+NG
Sbjct:  149 ATYVDPETGKEDPAKKGVCSNFLCDSTPGREISMTGPSGKVMLMPEKDPKTDLIMVATGTGIAPYRGFIRRLFVEKTPAAAAYEGQAWLFLGVANSDSLLYDDEWQAAKRSFPSNFRLDYALSREQNNKSGGKMYIQDKVEEYADEIFAKLENG 302
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A7S1UCU0_9STRA (Ferredoxin--NADP(+) reductase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCU0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 7.390e-68
Identity = 102/154 (66.23%), Postives = 125/154 (81.17%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A Y DPE G EDPAK G+CSNFL  A  G+E+ +TGP GK+ML+PE +P  DLI V TGTG+APYR F+RRLF E+TPAA AY G AWLFLGVAN++SLLY D+F +V++ +P NF+YD+ALSREQ N  GGKMYIQDK+EE+ADEIF +LD+G
Sbjct:  173 AVYWDPEMGAEDPAKKGICSNFLCDATPGTELTMTGPSGKVMLIPEENPETDLIMVATGTGIAPYRGFIRRLFTENTPAAAAYKGQAWLFLGVANSDSLLYDDEFSTVLKNYPENFKYDLALSREQTNAKGGKMYIQDKMEEYADEIFAKLDSG 326
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A6T6FTN4_9STRA (Ferredoxin--NADP(+) reductase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6FTN4_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.820e-68
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A Y  PE   +DPAK G+CSNFL  +  G EV++TGP GK+ML+PE DP  D I V TGTG+APYR FVRRLF EDTPAA+AY G AWLFLGVAN+++LLY D+FQ+  + FP NFR D ALSREQ N++GGKMYIQDKVEE+ADEIFE+L+NG
Sbjct:  138 ATYWCPELKADDPAKKGICSNFLCDSQPGDEVKMTGPAGKVMLMPEEDPTTDYIMVATGTGIAPYRGFVRRLFAEDTPAAKAYKGEAWLFLGVANSDALLYDDEFQAAKKEFPDNFRIDYALSREQTNKSGGKMYIQDKVEEYADEIFEKLENG 291
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A7S1XXE3_9STRA (Ferredoxin--NADP(+) reductase n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXE3_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.040e-67
Identity = 103/154 (66.88%), Postives = 123/154 (79.87%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A Y DPE G EDPAK G+CSNFL  A  G+E+ +TGP GK+ML+PE DP  DLI V TGTG+APYR F+RRLF E TPAA AY G AWLFLGVAN +SLLY D+F +V++ +P NF+YD+ALSREQ N  GGKMYIQDK+EE+ADEIF +LD+G
Sbjct:  173 AVYWDPEMGAEDPAKKGICSNFLCDATPGTELTMTGPSGKVMLMPEEDPETDLIMVATGTGIAPYRGFIRRLFTEATPAAAAYKGEAWLFLGVANKDSLLYDDEFSTVLKNYPENFKYDLALSREQTNAKGGKMYIQDKMEEYADEIFAKLDSG 326
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A7S3ZWG2_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWG2_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.220e-67
Identity = 102/154 (66.23%), Postives = 122/154 (79.22%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A Y DP+ G+EDPAK GVCSNFL  A AG +V++TGP GK+ML+PE     D I V TGTG+APYR F+RRLF E TPA  AY GLAWLFLGVAN+++LLY +++Q+   +FP NFR D ALSRE+KN+ GGKMYIQDKVEE+ADEIFERL NG
Sbjct:  114 ATYWDPDMGKEDPAKKGVCSNFLCDATAGEQVKMTGPTGKVMLMPEEKADTDYIMVATGTGIAPYRGFIRRLFTETTPAGEAYKGLAWLFLGVANSDALLYDEEWQAAKSKFPDNFRVDYALSREEKNKKGGKMYIQDKVEEYADEIFERLQNG 267
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A7S3KVQ4_9STRA (Ferredoxin--NADP(+) reductase n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3KVQ4_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.350e-67
Identity = 103/154 (66.88%), Postives = 122/154 (79.22%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A Y  PE   +DPAK G+CSNFL     G+EVQ+TGP GK+ML+PE DP  D I V TGTG+APYR F+RRLF EDTPAA AY G AWLFLGVAN+++LLY D++Q V ++FP NFR D ALSREQ N++GGKMYIQDKVEE+ADEIF +LDNG
Sbjct:  140 ATYWCPELKADDPAKKGICSNFLCDTEPGAEVQMTGPAGKVMLMPEEDPNTDYIMVATGTGIAPYRGFIRRLFVEDTPAAEAYKGEAWLFLGVANSDALLYDDEWQEVKKKFPKNFRLDYALSREQTNKSGGKMYIQDKVEEYADEIFSKLDNG 293
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A7R9TXV3_9VIRI (Ferredoxin--NADP reductase, chloroplastic n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TXV3_9VIRI)

HSP 1 Score: 216 bits (550), Expect = 3.830e-67
Identity = 104/154 (67.53%), Postives = 122/154 (79.22%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A Y DPE   +DPAK G+CSNFL    AG +V++TGPVGK+MLLPE DP  D I V TGTG+APYR FVRRLF EDT AA AY G AWLFLGVAN+++LLY D+FQ+   ++P NFR D ALSREQ+N  GGKMYIQDKVEE+ADEIFE+L+NG
Sbjct:  145 ATYWDPEMQADDPAKKGICSNFLCDTKAGDDVKMTGPVGKVMLLPEEDPNTDYIMVATGTGIAPYRGFVRRLFAEDTQAASAYKGQAWLFLGVANSDALLYDDEFQAAKAKYPDNFRIDYALSREQQNTKGGKMYIQDKVEEYADEIFEKLNNG 298
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BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Match: A0A7S3Y142_HETAK (Ferredoxin--NADP(+) reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y142_HETAK)

HSP 1 Score: 216 bits (550), Expect = 5.080e-67
Identity = 107/154 (69.48%), Postives = 120/154 (77.92%), Query Frame = 1 
Query:    1 AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPAADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLLYHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFERLDNG 462
            A Y DPETG+E+PAK GVCSNFL  A  G +V + GP GKIML+PE DP  DLI VGTGTGVAPYRSF+RRLF E +P A  Y G+AWLFLGVAN++SLLY   FQSV   +P NFR D ALSRE KNR GGKMYIQDK+ E+ADEIFERLD G
Sbjct:  155 ALYTDPETGKENPAKKGVCSNFLCDAKPGEQVLMLGPSGKIMLIPEQDPNTDLIMVGTGTGVAPYRSFIRRLFSETSPHAARYSGVAWLFLGVANSDSLLYDQYFQSVKAAYPENFRLDYALSREHKNRQGGKMYIQDKMAEYADEIFERLDKG 308
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19745.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CII9_9STRA1.880e-8077.27Ferredoxin--NADP(+) reductase n=1 Tax=Tribonema mi... [more]
A0A6H5KHJ2_9PHAE6.210e-7774.03Ferredoxin--NADP(+) reductase n=2 Tax=Ectocarpus T... [more]
A0A8J5XIC4_DIALT5.120e-7169.48Ferredoxin--NADP(+) reductase n=1 Tax=Diacronema l... [more]
A0A7S1UCU0_9STRA7.390e-6866.23Ferredoxin--NADP(+) reductase n=4 Tax=Phaeomonas p... [more]
A0A6T6FTN4_9STRA7.820e-6866.88Ferredoxin--NADP(+) reductase n=1 Tax=Craspedostau... [more]
A0A7S1XXE3_9STRA1.040e-6766.88Ferredoxin--NADP(+) reductase n=6 Tax=Phaeomonas p... [more]
A0A7S3ZWG2_9STRA2.220e-6766.23Ferredoxin--NADP(+) reductase n=2 Tax=Pelagomonas ... [more]
A0A7S3KVQ4_9STRA2.350e-6766.88Ferredoxin--NADP(+) reductase n=3 Tax=Bacillarioph... [more]
A0A7R9TXV3_9VIRI3.830e-6767.53Ferredoxin--NADP reductase, chloroplastic n=1 Tax=... [more]
A0A7S3Y142_HETAK5.080e-6769.48Ferredoxin--NADP(+) reductase n=1 Tax=Heterosigma ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19745contigP-wetherbeei_contig19745:1..945 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSR5
Model size462
Max annot lvl2880.D7FSR5|-
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.29e-70
EggNOG OGsCOG0369@1|root,KOG1158@2759|Eukaryota
DescriptionNADPH-hemoprotein reductase activity
Cds size462
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186180.4028919-CDS-P-wetherbeei_contig19745:0..511683186180.4028919-CDS-P-wetherbeei_contig19745:0..51Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19745 1..51 -
1683186180.4143007-CDS-P-wetherbeei_contig19745:220..4341683186180.4143007-CDS-P-wetherbeei_contig19745:220..434Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19745 221..434 -
1683186180.4221082-CDS-P-wetherbeei_contig19745:748..9451683186180.4221082-CDS-P-wetherbeei_contig19745:748..945Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19745 749..945 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19745.1.1prot_P-wetherbeei_contig19745.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19745 1..945 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19745.1.1

>prot_P-wetherbeei_contig19745.1.1 ID=prot_P-wetherbeei_contig19745.1.1|Name=mRNA_P-wetherbeei_contig19745.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
AAYVDPETGREDPAKAGVCSNFLHAAAAGSEVQLTGPVGKIMLLPESDPA
ADLIFVGTGTGVAPYRSFVRRLFQEDTPAARAYVGLAWLFLGVANTESLL
YHDDFQSVVRRFPFNFRYDVALSREQKNRAGGKMYIQDKVEEHADEIFER
LDNG
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mRNA from alignment at P-wetherbeei_contig19745:1..945-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19745.1.1 ID=mRNA_P-wetherbeei_contig19745.1.1|Name=mRNA_P-wetherbeei_contig19745.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=945bp|location=Sequence derived from alignment at P-wetherbeei_contig19745:1..945- (Phaeothamnion wetherbeei SAG_119_79)
GCAGCCTACGTGGACCCGGAGACCGGCAGGGAAGACCCGGCAAAGGCGGG
CGTCTGCTCCAACTTCCTTCATGCTGCCGCCGCTGGCAGCGAAGTGCAGC
TGACGGGGCCCGTTGGCAAGATCATGCTGCTGCCGGAGAGCGACCCGGCC
GCGGACCTCATCTTCGTGGGGACCGGGACCGGCGTCGCACCGTACAGGTT
CGTGCGTCATGCATGAATGAGGGTGTTTGGCGATGGTGGCAAGGTGGCCG
CCGTTGCAGAATAATGCGGAGGCTGTTAGTGGAAAACGTGGACAGCGATC
GCAGCTGCGGCTGCAGCCATTGCTGTGGCGGCCGTGGCAGGGGCAAGGGG
CGGCTGCGACGAGAGCCATGGCAGCAAGTGCGGCAGCGGCAGCACATGCG
ACTTCTGGCGATTTCATGTTCTCAACTGGATTCATACGGTTTAAGAGTCT
AGTAGTTGTTCACCGCCTAATCCGCGCCCCCCGGGTCCGTTTCCCCGTTG
TTTGGCGGCAGGTCTTTTGTCCGGCGGCTCTTTCAGGAGGACACACCGGC
GGCGCGAGCCTATGTGGGGCTGGCGTGGCTCTTTCTGGGGGTGGCTAACA
CAGAGTCGCTGCTCTACCACGATGATTTCCAGAGCGTCGTGCGCCGCTTC
CCTTTCAACTTCCGCTACGACGTAGCGCTGTCGCGCGAGCAGAAGAACCG
CGCAGGCGGCAAGATGTACATTCAGGTCCATTTCAGTTCGGGGCGGCCTT
TGCTGGTGGCGCGTGCCTGTGTTAGCCGCCTAGTTCTCAGAGAGAGATTC
ACCTGTGGGTCTTGTTTTCCATTATATCTGTTTTTTGATGTTCTGATTTT
TCCCTCATTGTTTGGCTTCACCTTCCTCGCGGCGGATCCGGCAGGACAAG
GTGGAGGAGCACGCCGACGAGATCTTTGAGCGCCTCGACAATGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19745:1..945-

>mRNA_P-wetherbeei_contig19745.1.1 ID=mRNA_P-wetherbeei_contig19745.1.1|Name=mRNA_P-wetherbeei_contig19745.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig19745:1..945- (Phaeothamnion wetherbeei SAG_119_79)
GCAGCCTACGTGGACCCGGAGACCGGCAGGGAAGACCCGGCAAAGGCGGG
CGTCTGCTCCAACTTCCTTCATGCTGCCGCCGCTGGCAGCGAAGTGCAGC
TGACGGGGCCCGTTGGCAAGATCATGCTGCTGCCGGAGAGCGACCCGGCC
GCGGACCTCATCTTCGTGGGGACCGGGACCGGCGTCGCACCGTACAGGTC
TTTTGTCCGGCGGCTCTTTCAGGAGGACACACCGGCGGCGCGAGCCTATG
TGGGGCTGGCGTGGCTCTTTCTGGGGGTGGCTAACACAGAGTCGCTGCTC
TACCACGATGATTTCCAGAGCGTCGTGCGCCGCTTCCCTTTCAACTTCCG
CTACGACGTAGCGCTGTCGCGCGAGCAGAAGAACCGCGCAGGCGGCAAGA
TGTACATTCAGGACAAGGTGGAGGAGCACGCCGACGAGATCTTTGAGCGC
CTCGACAATGGC
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