mRNA_P-wetherbeei_contig19732.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19732.1.1
Unique NamemRNA_P-wetherbeei_contig19732.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A6N7GQK2_9HYPH (Thiamine pyrophosphate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GQK2_9HYPH)

HSP 1 Score: 540 bits (1392), Expect = 1.400e-186
Identity = 264/423 (62.41%), Postives = 318/423 (75.18%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWRKAFESSHKKRE-KLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            QMLR+F++PFISLNPGASYRGFHDS++NHLGNE PG+ILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHG M +FNAW DRAPM++LGATGP+ S KRRPWIDWIHTSRDQ   +RS +KWDDQP+S  ALVE++ RANI+TR+APTAPVYVVLDAG QE KLD +  PE PDLSR  PP  P P  E +D  VA+LK A+KPL+L GR  RR E W  R++L E LGA V TDLK  A FPT++      PFNQ+   ARQ++ EAD+I+SLDW+DLGGA+RQ K+ G V AK++HCSLD  LH+GA+M+YQELP  DV      D MVA LN AL    +K PW+      +K+    L +  +A  LR+    D E  +F  L RGWP +++PF+   +Y+GKDGGGG+GSGPGIS
Sbjct:   34 QMLRRFNVPFISLNPGASYRGFHDSLVNHLGNENPGIILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGMMGIFNAWCDRAPMIMLGATGPVASEKRRPWIDWIHTSRDQGAYIRSLVKWDDQPTSASALVEAMARANIITRTAPTAPVYVVLDAGFQETKLDKE--PEWPDLSRHQPPKPPRPSKEALDQAVAILKDAKKPLILYGRGSRRDEYWQPRIRLAERLGACVFTDLKQGAMFPTDNSHHYAEPFNQVVKEARQLMCEADVILSLDWMDLGGALRQAKSVGTVTAKIIHCSLDQTLHTGANMEYQELPPADVYSATTGDVMVAELNGALGEG-RKDPWKAKLPPKNKQANGALTMDVIAQSLRDQFN-DPENVTFCTLGRGWPTDIWPFQSGMSYLGKDGGGGLGSGPGIS 452          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A7C4TPN9_9HYPH (Thiamine pyrophosphate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TPN9_9HYPH)

HSP 1 Score: 534 bits (1376), Expect = 2.490e-184
Identity = 260/414 (62.80%), Postives = 316/414 (76.33%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWRKAFESSHKKR-EKLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGG 1239
            QMLR+  IP++SLNPGASYRG HDS++NHLGN+ PG+ILCLHEDH+VAIAHGYAKATGEPMACVLHSNVGLLHG MSLFNAW DR PMLVLGATGP+DSTKRRPWIDWIHTS+DQ GL+R FIKWDDQP+S +ALVES+CRANI+TRSAPTAPVY+ LDAGLQE +L+ +  PE PDL+R+ PP +P P    V+   ALL+ AR+PL+++GR  R  E W ARVKL E LGA VM+DLK  AAFPT+HPA VV PFNQ+ + AR+++  AD+I++LDW+DL G +R   ++G V AK++  SLD  LH+GAHMD+Q LP VDVRI A  D++VA L   L    KKAPW        K     + L  VA  LR A+    +K SF  L RGWP +++P +DP AY+GKDGGG
Sbjct:   23 QMLRRLGIPYVSLNPGASYRGLHDSLVNHLGNQMPGIILCLHEDHAVAIAHGYAKATGEPMACVLHSNVGLLHGMMSLFNAWCDRVPMLVLGATGPVDSTKRRPWIDWIHTSKDQGGLIRDFIKWDDQPTSAEALVESMCRANILTRSAPTAPVYICLDAGLQETRLEKE--PEWPDLARYVPPASPRPARAAVEQAKALLEGARRPLMMVGRGRRTSEAWAARVKLAERLGACVMSDLKTPAAFPTDHPAHVVQPFNQVPNPARELICSADLILALDWVDLAGCLRASSSAGRVTAKIIATSLDQHLHNGAHMDHQGLPPVDVRIAAEADEVVADLLETLGTG-KKAPWHDPIVPKRKDDGSAVTLPRVASALRKAV-TQPDKVSFASLCRGWPTDIWPLRDPLAYLGKDGGG 432          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A6L5FDP2_9HYPH (Thiamine pyrophosphate-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FDP2_9HYPH)

HSP 1 Score: 530 bits (1364), Expect = 1.640e-182
Identity = 264/425 (62.12%), Postives = 320/425 (75.29%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPP-PAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWRKAFESSHKKREKLHLT--HVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            QMLR+F IP++SLN GASYRG HDS++NHLGNETPGM+LCLHEDH+V+IAHGYAKATGEPMAC LHSNVGL+HG MSL+NAW DR PM+VLGATGPLDS KRRPWIDWIHT+RDQ GL+RSF+KWDD P+SP ALVES+CRANI TR+AP+APVY+ LDAGLQE KLD  T P+ PDL+RFTPP PA  PG   V A  ALL  A +P++LIGR  R Q+ W ARV+L E LGA  MTDLK+ + FPT+H A VV PFN +    R+V+ EAD+I++LDWIDLGG++R       + AK++  +LD  LH+G +MD+Q L  VD+ I A PD +VA L  AL    +K PWR    +  K+R    +T  HVA  LR A   D +  SF  L RGWP++L+P  DP AY+GKDGGGGIGSGPG+S
Sbjct:   23 QMLRRFGIPYVSLNFGASYRGLHDSVVNHLGNETPGMLLCLHEDHAVSIAHGYAKATGEPMACFLHSNVGLMHGMMSLYNAWCDRVPMIVLGATGPLDSAKRRPWIDWIHTTRDQGGLIRSFVKWDDLPASPDALVESMCRANIATRTAPSAPVYICLDAGLQEAKLD--TVPQWPDLARFTPPEPARPPGA-VVAAASALLDKAERPVLLIGRGRRTQDAWLARVELAERLGACAMTDLKSGSTFPTDHAAHVVAPFNNVGKAGREVLAEADVILALDWIDLGGSVRPSADGPAITAKIISATLDHTLHNGFNMDHQALAPVDLPIAAAPDAVVADLLAALGPGTRK-PWRSKIVAKPKERGDGAVTMEHVATSLRAAFN-DPDTVSFVSLGRGWPVDLWPLTDPLAYLGKDGGGGIGSGPGLS 442          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A1Q4BA19_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1Q4BA19_9HYPH)

HSP 1 Score: 468 bits (1205), Expect = 1.780e-158
Identity = 230/424 (54.25%), Postives = 298/424 (70.28%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWRKAFESSHKKRE--KLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            QMLR     + +LNPGASYRG HDS++NHLGN  PGM+LCLHEDH V IAHGYAKAT +PMA ++HSNVGL+H  M +FNA+ DR PM+++GATGP+D+ +RRPWIDWIHTS DQAG+VR  IK+D+ P+S +A+V+++ +ANI TR+ P APVY+VLDAGLQE  LD    P +PD+SRF PP AP      +D   A+LK+A++PL+L GR  R Q +WDARV+L ETLGA VMTDLKN A FPT+HPA V+ PFNQ   +   ++ EAD++++ +W+DL G+I   K S   + KV+   LD  LH+GAHM YQ     D+ I+A P  +V  LN  L    KK PWR A     K  +  ++ +  VA  LR  +  D +K SF  LAR WP + +P++DP AYMGKDGGGGIGSGP +S
Sbjct:   24 QMLRLCGFKYAALNPGASYRGLHDSLVNHLGNRDPGMLLCLHEDHVVGIAHGYAKATDQPMAAIVHSNVGLMHAHMGIFNAYCDRVPMMIVGATGPVDAHQRRPWIDWIHTSADQAGIVRDIIKFDNLPTSAEAIVDAMAKANIATRTEPCAPVYIVLDAGLQEQSLDKV--PALPDMSRFQPPAAPRAQKADIDRAAAMLKAAKRPLLLYGRGSRSQAEWDARVQLAETLGACVMTDLKNGAMFPTDHPAHVIEPFNQPGKDILDLIAEADLVIAFEWVDLNGSISPPKGSNF-SGKVISVGLDHHLHNGAHMVYQGTAPTDLLISASPASVVDDLNATLGKT-KKEPWRAAIRKPFKPGDGSRIRMQDVAQALRENV-PDPDKISFAALARQWPCDQWPWRDPGAYMGKDGGGGIGSGPSLS 442          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A1F3YPD5_9PROT (Acetolactate synthase n=1 Tax=Betaproteobacteria bacterium RBG_16_64_18 TaxID=1797477 RepID=A0A1F3YPD5_9PROT)

HSP 1 Score: 434 bits (1115), Expect = 8.120e-145
Identity = 218/424 (51.42%), Postives = 288/424 (67.92%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWRKA--FESSHKKREKLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            Q+LR+  IP+I+LNPGASYRG HDS++NHLGN  P MI+CLHE+ +VAIAHGYAKATG+PMA  LHSNVGL+HG+M+++NAW DR PML+LGATGP+D+T RRPWIDWIHTS+DQ  L+R+F+KWDDQP S  AL ES+ RA   T + P  PVYV LDA +QE  L ++    +P  +RF P PA  P  + +     +L  A++P++L GR  R Q+ WD RV L E LGA +++DLK  A  PT+HP  V  PFNQL+  A+  +  AD+I+SL  IDLGG +RQ    G V A V+H   D  LH+G   ++ ELPA+DV +   PD  VA L  AL   P  A  ++A   E   ++ + ++L  VA  L  A+G   +  +F GL R WP+EL+P + P  ++GKDGGGG+GSGPGI+
Sbjct:   23 QVLRRLDIPYIALNPGASYRGLHDSLVNHLGNSAPEMIMCLHEEQAVAIAHGYAKATGKPMAVALHSNVGLMHGTMAIYNAWCDRQPMLILGATGPVDATLRRPWIDWIHTSQDQGALLRNFVKWDDQPGSVAALPESIFRAWQQTATPPHGPVYVCLDAAIQEQALTDEVP--IPGPARFGPAPASRPAAQALREAAGMLARAKRPVILFGRGRRTQKDWDRRVALAERLGAAMLSDLKAGAMVPTDHPLHVGEPFNQLSKPAKAALQAADVILSLASIDLGGILRQAFGRGDVPATVIHAGDDIYLHNGWGKEHMELPAIDVHLLGDPDAAVADLLEALPERPGNAAAQRASPVERQPEQGDSINLRRVATALAAAVGD--QPVTFAGLPRAWPVELWPHRHPLDHLGKDGGGGLGSGPGIT 442          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A1F4F0B2_9PROT (Acetolactate synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F0B2_9PROT)

HSP 1 Score: 432 bits (1110), Expect = 5.220e-144
Identity = 219/427 (51.29%), Postives = 284/427 (66.51%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRAL-----SAAPKKAPWRKAFESSHKKREKLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            Q+LR+  IP+I+LNPGASYRG HDS++NHLGN  P MI+CLHE+H+VAIA GYAKATGEPMA  LHSNVGL+HGSM+++NAW DR PML+LGATGP+D+  RRPWIDWIHT++DQ  L+R+F+KWDDQP S  A+ ES+ RA   T +AP  PVYV LDA +QE  L  +    +PD  RF P PA  P    +     LL  A +P++L GR  R Q  W+ RV L E L A +++DLK  A  P++HP  V  PFNQL+   +  +  AD ++SL WIDLGG +RQ    G V AKV+H   D  LH+G   ++ ELPA+DV +   PD   A L   L      + P K    +  +SS    ++L+L  VA+ LR A+ AD +  +F  LAR WPIEL+P + P  ++GKDGGGG+GSGPGI+
Sbjct:   28 QVLRRLGIPYIALNPGASYRGLHDSLVNHLGNHAPEMIMCLHEEHAVAIAQGYAKATGEPMAVALHSNVGLMHGSMAIYNAWCDRQPMLILGATGPVDAVLRRPWIDWIHTAQDQGALIRNFVKWDDQPGSVAAIPESVFRAWQQTATAPHGPVYVCLDAAIQEQALGEEVA--IPDAERFRPAPAARPAASALREAADLLARAERPVILFGRGSRAQAAWERRVALAERLDAGMLSDLKTGAMVPSDHPLHVGEPFNQLSKAGKAALEAADAVLSLGWIDLGGVLRQAYGRGTVPAKVIHAGDDLYLHNGWGKEHMELPAIDVHLLGDPDAAAAELLELLLPKNTGSHPAKGEPAQPLQSS----DQLNLRSVALALRAAV-AD-QPVTFAALARAWPIELWPHRHPLDFLGKDGGGGVGSGPGIA 446          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A1F4AXZ6_9PROT (Acetolactate synthase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_63_19 TaxID=1797486 RepID=A0A1F4AXZ6_9PROT)

HSP 1 Score: 427 bits (1098), Expect = 4.310e-142
Identity = 216/424 (50.94%), Postives = 282/424 (66.51%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWRKAFESSHKKR--EKLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            Q+LR+  I +I+L PGASYRG HDS++NHLGN  P M++CLHE+H+VAIAHGYAKATGEPMA  LHSNVGLLHGSM++FNAW DRAPML++GATGP+D+T RRPWIDWIHTS+DQ  L+R+F+KWDDQP S  AL ES+ RA   T +AP APVYV LDA +QE  L  + +  +PD  R+ P PA  P  + +    A+L  +R  ++L GR  R Q+ WD RV L E LGA +++DLK  +  PT+HP  V  PFNQL+  A+  +  AD+I+SL W+DLGGA+RQ      V A V+H   D  LH+G   ++ ELPA+DV +    D  VA L  AL      A    A   +H     ++++L  VA  L  A+G   +  +F  L R WP+ L+  + P  Y+GKDGGGG+GSGPG +
Sbjct:   35 QVLRRLDIRYIALTPGASYRGLHDSLVNHLGNFAPEMLMCLHEEHAVAIAHGYAKATGEPMAVALHSNVGLLHGSMAVFNAWCDRAPMLIIGATGPVDATLRRPWIDWIHTSQDQGALLRNFVKWDDQPGSVAALPESIYRAWQQTATAPHAPVYVCLDAAIQEQALTEEVR--IPDPRRYRPAPASRPDAQALREAAAILARSRNTVILFGRGRRTQQDWDRRVALAERLGAAMLSDLKVGSMVPTDHPLHVGEPFNQLSRPAKAALQAADVILSLGWVDLGGALRQAFGRDSVPATVIHAGDDIHLHNGWGKEHMELPAIDVHLLGDADAAVADLLEALPPGRASARTAPAETQTHPDDGGDRINLHQVATALAQAVGE--QPVTFAALPRAWPVTLWQHRHPLDYLGKDGGGGVGSGPGTT 454          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A1X6ZWQ5_9RHOB (Benzoylformate decarboxylase n=1 Tax=Roseivivax jejudonensis TaxID=1529041 RepID=A0A1X6ZWQ5_9RHOB)

HSP 1 Score: 426 bits (1096), Expect = 7.180e-142
Identity = 219/423 (51.77%), Postives = 285/423 (67.38%), Query Frame = 1
Query:    4 MLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWRKAFESSHKKREKLHLTHVAIELRNAL--GADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            MLR+  IPFI+L PGASYRG HDS++NHLGNE P M++CLHE+H+VAIAHGYAKATG  MA  LHSNVGL+HG+M++FNA+ DRAPML+LGATGP+D+T+RRPWIDW+HT++DQA LVR FIKWDDQP+S  A  E++ R      +AP  PVY+ LDA  QE  L   T   +PD +R+ PP   AP  + +D  VA +  A +P++L GR  R +   DARV L E LGA +++DLK  A  PT HP    PPFN+L++ AR V+ EAD+IVSL W DLGG ++Q   +   +  +VH SLD  LHSG + ++  LP VDV +    D  VAAL   L+A P+ AP R A        E    T    ++  AL   AD +  +F+ LARG+P+++ P   P  Y+GKDGGGGIGSGPG++
Sbjct:   34 MLRRLGIPFIALTPGASYRGLHDSLVNHLGNERPEMLVCLHEEHAVAIAHGYAKATGRAMAVALHSNVGLMHGTMAIFNAFADRAPMLILGATGPMDATERRPWIDWLHTTQDQAALVRHFIKWDDQPASALATPEAMLRGWKAANTAPGGPVYINLDASDQEAPLPAGTT--LPDPARYAPPADTAPDPDALDRAVAAISRAARPVLLFGRGARTEAAMDARVALAERLGAPMLSDLKTGAMVPTTHPLHAGPPFNKLSAPARAVLEEADLIVSLGWTDLGGLLKQAYGTPPDHVAIVHASLDHQLHSGWNQEHFALPPVDVELAVSSDSAVAAL---LAALPEGAPRRPAMPEVAPPAEGDGTTLTNRDVARALKTAADGQPITFSALARGFPVDILPHTHPLDYLGKDGGGGIGSGPGLT 451          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: UPI00116341FA (thiamine pyrophosphate-binding protein n=1 Tax=Tardiphaga sp. vice154 TaxID=2592814 RepID=UPI00116341FA)

HSP 1 Score: 424 bits (1089), Expect = 6.770e-141
Identity = 216/432 (50.00%), Postives = 284/432 (65.74%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQ-GKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMV----AALNRALSAAPKKAPWR-----KAFESSHKKREKLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGSGPGIS 1266
            QMLR   IP+I+LNPGASYRGFHDS++N+LGNE P M+LCL+EDH V+IAHGYAK TG+ MACVLHSNVGLLHGSM +FNAW DR PM+++GATGP+   KRRPWIDWIHTS+DQ  L+R F KWDD+P SP  +VE+  R + +T S PTAPVY+ LDAGLQE KLD      +P  +R+ P  AP      ++AV  LL +AR PL+L GR GR QE WDARV+L E  GA VMT ++  + FPTEH   V+PPF  L+  A+ +V +AD+IVS DW+DL G + Q  + +    AK+ H +LD+ LH G  MDY  LP +DV + A  D  V    AAL + L     K  W+      A E ++ +  +  L    IE+  A    ++  +   +  GW  +++ F+DP  +MG DGG G+ +GPG++
Sbjct:   24 QMLRVLDIPYIALNPGASYRGFHDSLVNNLGNEAPQMLLCLNEDHVVSIAHGYAKVTGKAMACVLHSNVGLLHGSMGIFNAWCDRVPMIIVGATGPVAPEKRRPWIDWIHTSKDQGALIRDFTKWDDEPRSPHGIVEAFLRGSQLTNSQPTAPVYICLDAGLQEQKLDAPMN--VPSPARYQPAAAPRASQHDIEAVAELLATARNPLILFGRGGRSQEAWDARVRLAELTGASVMTSIRERSVFPTEHKLHVIPPFYWLSPKAKDIVRQADVIVSFDWVDLNGFLLQLTRDTDSYPAKIAHVTLDAGLHRGWSMDYFSLPPLDVPVVAGADGFVEDVLAALEKKLGG---KRLWKGDDRNSAPEPAYTQDAQTELGPRDIEVALARVRGSQTFTLAHVTIGWAGDVYSFRDPLDFMGHDGGAGLAAGPGLT 450          
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Match: A0A522TCS8_9ACTN (Thiamine pyrophosphate-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A522TCS8_9ACTN)

HSP 1 Score: 421 bits (1082), Expect = 5.150e-140
Identity = 216/424 (50.94%), Postives = 289/424 (68.16%), Query Frame = 1
Query:    1 QMLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAHGYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTKRRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPTAPVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALLKSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPAQVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVHCSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAAL--NRALSAAPKKAPWRKAFESSH-----KKREKLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFKDPQAYMGKDGGGGIGS 1251
            +++ Q  +PFISL PGASYRG HDS++N+LGN  P MILCLHE+H+VA+AHGYAK TG+PMA  LHSNVGL+H +M++FNA+ DR PML+LGATGP+D+++RRPWIDWIHTS DQA L+R++ KWDDQP S  A +ESL RAN+MTRS P AP Y+ LDAG+QE +L        P+LSR  PP  PA   +T D V  LLK ARKPL+LIGR  R ++ WD RVKLVE LGA V+TDLK  A FPT H  Q   P +++ +  R+++ ++D+I+SLDW+DLGG ++   A   +  KV+ C+ DS LH+G   D+  LP VD+ I A P+ +V++L       A   +  W    ESS      K+ ++L ++ +A  L+NAL     K ++TGL  GW      F DP  Y+G+DGG G+G+
Sbjct:   10 EVISQLDLPFISLTPGASYRGVHDSLVNYLGNTKPQMILCLHEEHAVAVAHGYAKVTGKPMAVALHSNVGLMHATMAIFNAFCDRMPMLILGATGPIDASERRPWIDWIHTSIDQAALIRNYCKWDDQPGSVAAALESLVRANMMTRSYPPAPTYICLDAGIQEEQLSAPIP--TPNLSRHQPPAPPAVSPQTTDEVWNLLKEARKPLILIGRVARDRKTWDERVKLVEALGACVLTDLKVGAVFPTRHRLQPAWPGSRITAAGRELIRQSDVILSLDWVDLGGTLQT--ADSGITQKVISCTNDSALHNGWSKDHYALPKVDLSICADPNTLVSSLLAKSEGEATITRVDWPPRLESSEDDSGGKESDQLLMSELASMLQNALSG--RKVTWTGLPLGWSRGDLDFDDPLDYLGRDGGAGVGA 427          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19732.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7GQK2_9HYPH1.400e-18662.41Thiamine pyrophosphate-binding protein n=1 Tax=Hyp... [more]
A0A7C4TPN9_9HYPH2.490e-18462.80Thiamine pyrophosphate-binding protein n=1 Tax=Hyp... [more]
A0A6L5FDP2_9HYPH1.640e-18262.12Thiamine pyrophosphate-binding protein n=1 Tax=Hyp... [more]
A0A1Q4BA19_9HYPH1.780e-15854.25Uncharacterized protein n=2 Tax=Hyphomicrobiales T... [more]
A0A1F3YPD5_9PROT8.120e-14551.42Acetolactate synthase n=1 Tax=Betaproteobacteria b... [more]
A0A1F4F0B2_9PROT5.220e-14451.29Acetolactate synthase n=1 Tax=Betaproteobacteria b... [more]
A0A1F4AXZ6_9PROT4.310e-14250.94Acetolactate synthase n=1 Tax=Betaproteobacteria b... [more]
A0A1X6ZWQ5_9RHOB7.180e-14251.77Benzoylformate decarboxylase n=1 Tax=Roseivivax je... [more]
UPI00116341FA6.770e-14150.00thiamine pyrophosphate-binding protein n=1 Tax=Tar... [more]
A0A522TCS8_9ACTN5.150e-14050.94Thiamine pyrophosphate-binding protein n=1 Tax=Act... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19732contigP-wetherbeei_contig19732:2..1267 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1415756.JQMY01000001_gene798
PFAMsTPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N
Model size1266
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00027,RC00106,RC00595,RC01192,RC02744,RC02893
KEGG koko:K01576,ko:K01652
KEGG ReactionR00006,R00014,R00226,R01764,R02672,R03050,R04672,R04673,R08648
KEGG Pathwayko00290,ko00627,ko00650,ko00660,ko00770,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00290,map00627,map00650,map00660,map00770,map01100,map01110,map01120,map01130,map01210,map01230
KEGG ModuleM00019,M00570
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.55e-136
EggNOG OGsCOG0028@1|root,COG0028@2|Bacteria,1MX3Q@1224|Proteobacteria,2U2RW@28211|Alphaproteobacteria,2PF8C@252301|Oceanicola
EC2.2.1.6,4.1.1.7
DescriptionThiamine pyrophosphate enzyme, central domain
Cds size1263
COG categoryEH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186180.124998-CDS-P-wetherbeei_contig19732:1..12641683186180.124998-CDS-P-wetherbeei_contig19732:1..1264Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19732 2..1264 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186180.1417103-UTR-P-wetherbeei_contig19732:1264..12671683186180.1417103-UTR-P-wetherbeei_contig19732:1264..1267Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19732 1265..1267 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19732.1.1prot_P-wetherbeei_contig19732.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19732 2..1264 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19732.1.1

>prot_P-wetherbeei_contig19732.1.1 ID=prot_P-wetherbeei_contig19732.1.1|Name=mRNA_P-wetherbeei_contig19732.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=421bp
MLRQFSIPFISLNPGASYRGFHDSIINHLGNETPGMILCLHEDHSVAIAH
GYAKATGEPMACVLHSNVGLLHGSMSLFNAWLDRAPMLVLGATGPLDSTK
RRPWIDWIHTSRDQAGLVRSFIKWDDQPSSPQALVESLCRANIMTRSAPT
APVYVVLDAGLQEMKLDNQTKPEMPDLSRFTPPPAPAPGVETVDAVVALL
KSARKPLVLIGRNGRRQEQWDARVKLVETLGAVVMTDLKNCAAFPTEHPA
QVVPPFNQLNSNARQVVGEADIIVSLDWIDLGGAIRQGKASGMVNAKVVH
CSLDSMLHSGAHMDYQELPAVDVRINACPDQMVAALNRALSAAPKKAPWR
KAFESSHKKREKLHLTHVAIELRNALGADAEKASFTGLARGWPIELFPFK
DPQAYMGKDGGGGIGSGPGIS
back to top

mRNA from alignment at P-wetherbeei_contig19732:2..1267-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19732.1.1 ID=mRNA_P-wetherbeei_contig19732.1.1|Name=mRNA_P-wetherbeei_contig19732.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1266bp|location=Sequence derived from alignment at P-wetherbeei_contig19732:2..1267- (Phaeothamnion wetherbeei SAG_119_79)
CAAATGCTCCGGCAATTCAGTATTCCGTTTATCAGCTTGAACCCTGGTGC GAGCTATCGCGGTTTTCACGATTCGATCATCAACCACCTGGGGAATGAGA CCCCCGGCATGATCCTGTGCCTGCACGAAGATCATTCGGTTGCCATTGCG CACGGTTACGCCAAGGCGACCGGCGAGCCGATGGCGTGCGTGCTGCATTC CAACGTCGGACTGCTGCATGGCTCGATGAGCCTGTTCAATGCGTGGCTCG ACCGGGCGCCAATGCTGGTCCTGGGGGCGACGGGACCGCTCGATTCGACC AAGCGCCGGCCGTGGATCGACTGGATACATACCTCGCGCGATCAGGCGGG GCTGGTGCGTTCGTTCATCAAGTGGGACGATCAGCCTTCATCGCCGCAAG CCCTCGTCGAATCCCTTTGCCGCGCCAACATCATGACGCGCTCGGCGCCG ACTGCGCCGGTCTATGTGGTGCTCGATGCCGGGCTTCAGGAGATGAAGCT CGACAATCAGACCAAGCCGGAAATGCCCGACCTGTCGCGCTTCACGCCGC CGCCTGCGCCAGCACCGGGCGTCGAGACGGTCGATGCCGTCGTGGCGCTT CTGAAGTCGGCCAGGAAACCGTTGGTTCTGATCGGCCGGAATGGCCGCCG GCAGGAACAGTGGGATGCGCGGGTCAAGCTCGTCGAGACGCTCGGGGCGG TCGTGATGACCGATCTCAAGAACTGCGCTGCGTTTCCCACCGAGCACCCG GCCCAGGTGGTGCCGCCGTTCAACCAGCTCAATTCAAATGCGCGGCAGGT GGTCGGGGAGGCCGACATCATCGTGTCCCTCGACTGGATCGACCTGGGGG GCGCGATCCGGCAAGGCAAGGCGTCGGGTATGGTCAATGCCAAGGTCGTT CACTGCTCGCTCGACAGCATGCTGCATTCGGGCGCACACATGGACTATCA GGAATTGCCGGCCGTCGATGTGCGCATCAACGCTTGCCCCGACCAGATGG TGGCGGCGTTGAACCGTGCGTTGAGTGCGGCGCCCAAAAAGGCGCCGTGG CGGAAGGCGTTCGAGAGCAGCCACAAGAAGCGCGAGAAACTGCATCTCAC TCATGTCGCGATCGAATTGCGGAATGCGCTTGGTGCAGACGCCGAAAAGG CCAGCTTCACCGGCTTGGCACGTGGCTGGCCGATCGAATTGTTTCCGTTC AAGGATCCGCAGGCCTACATGGGTAAGGACGGCGGCGGCGGCATCGGATC GGGCCCCGGGATTTCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19732:2..1267-

>mRNA_P-wetherbeei_contig19732.1.1 ID=mRNA_P-wetherbeei_contig19732.1.1|Name=mRNA_P-wetherbeei_contig19732.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1263bp|location=Sequence derived from alignment at P-wetherbeei_contig19732:2..1267- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCCGGCAATTCAGTATTCCGTTTATCAGCTTGAACCCTGGTGCGAG
CTATCGCGGTTTTCACGATTCGATCATCAACCACCTGGGGAATGAGACCC
CCGGCATGATCCTGTGCCTGCACGAAGATCATTCGGTTGCCATTGCGCAC
GGTTACGCCAAGGCGACCGGCGAGCCGATGGCGTGCGTGCTGCATTCCAA
CGTCGGACTGCTGCATGGCTCGATGAGCCTGTTCAATGCGTGGCTCGACC
GGGCGCCAATGCTGGTCCTGGGGGCGACGGGACCGCTCGATTCGACCAAG
CGCCGGCCGTGGATCGACTGGATACATACCTCGCGCGATCAGGCGGGGCT
GGTGCGTTCGTTCATCAAGTGGGACGATCAGCCTTCATCGCCGCAAGCCC
TCGTCGAATCCCTTTGCCGCGCCAACATCATGACGCGCTCGGCGCCGACT
GCGCCGGTCTATGTGGTGCTCGATGCCGGGCTTCAGGAGATGAAGCTCGA
CAATCAGACCAAGCCGGAAATGCCCGACCTGTCGCGCTTCACGCCGCCGC
CTGCGCCAGCACCGGGCGTCGAGACGGTCGATGCCGTCGTGGCGCTTCTG
AAGTCGGCCAGGAAACCGTTGGTTCTGATCGGCCGGAATGGCCGCCGGCA
GGAACAGTGGGATGCGCGGGTCAAGCTCGTCGAGACGCTCGGGGCGGTCG
TGATGACCGATCTCAAGAACTGCGCTGCGTTTCCCACCGAGCACCCGGCC
CAGGTGGTGCCGCCGTTCAACCAGCTCAATTCAAATGCGCGGCAGGTGGT
CGGGGAGGCCGACATCATCGTGTCCCTCGACTGGATCGACCTGGGGGGCG
CGATCCGGCAAGGCAAGGCGTCGGGTATGGTCAATGCCAAGGTCGTTCAC
TGCTCGCTCGACAGCATGCTGCATTCGGGCGCACACATGGACTATCAGGA
ATTGCCGGCCGTCGATGTGCGCATCAACGCTTGCCCCGACCAGATGGTGG
CGGCGTTGAACCGTGCGTTGAGTGCGGCGCCCAAAAAGGCGCCGTGGCGG
AAGGCGTTCGAGAGCAGCCACAAGAAGCGCGAGAAACTGCATCTCACTCA
TGTCGCGATCGAATTGCGGAATGCGCTTGGTGCAGACGCCGAAAAGGCCA
GCTTCACCGGCTTGGCACGTGGCTGGCCGATCGAATTGTTTCCGTTCAAG
GATCCGCAGGCCTACATGGGTAAGGACGGCGGCGGCGGCATCGGATCGGG
CCCCGGGATTTCC
back to top