mRNA_P-wetherbeei_contig10055.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10055.2.1
Unique NamemRNA_P-wetherbeei_contig10055.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: A0A7S2V1Y0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.940e-26
Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 1
Query:  304 LKAKGVLGKWGSGSFGEAWSVSQGQLKSVAGIDGKAF--DIDGGIDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVSRRILHE 666
            +K +G++  WGS    E   V+   + S  GI G     D    +DDLK+++ YV  GSF LAV SG +IGGNVGAT TY FA++PI+FLG+GST+PGLI+A ID VK+R+DP +  RR+ HE
Sbjct:  124 MKEEGMITMWGS-EVAECRRVNMISMTSQTGIRGADLGADTSSTLDDLKFSILYVTMGSFALAVLSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGLISAGIDAVKSRADPTFDERRVRHE 245          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: A0A7S3UVY9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVY9_HETAK)

HSP 1 Score: 114 bits (284), Expect = 3.590e-26
Identity = 68/144 (47.22%), Postives = 98/144 (68.06%), Query Frame = 1
Query:  250 MGALSVEGAPARRAALDAL---KAKGVLGKWGSGSFGEAWSVSQGQLKSVAGIDGKAFD-IDGGI-DDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVSRRILHE 666
            +GA  V+G+ A  A L+AL   KA GV+  W S     +++V+ G++ S  GI+GK    ++GG  DDL+++L  V  GSF+LA  SG +IGGNVGAT TY FA++PI+FLG+GST+PG+I +AI+  K  +D ++  RRI HE
Sbjct:  117 LGAAPVDGSGAAAAQLEALGGLKADGVVNTWKSKEV-TSYAVTIGRMTSATGIEGKDLSPLEGGNEDDLRWSLVVVCLGSFILAAGSGIVIGGNVGATLTYLFAVIPILFLGVGSTAPGIITSAIEGFKTNTDSDFNERRIRHE 259          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: A0A7S2C0S6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C0S6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.330e-25
Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 1
Query:  226 PQELAAKIMG-ALSVEGAPARR--AALDALKAKGVLGKWGSGSFGEAWSVSQGQLKSVAGIDGKAFDI--DGGIDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVSRRILHE 666
            P+E+  K++  A+  + A A    A LDALK  G L  WG        + + GQL+   G+D     +  +  +D+LK AL  V A S ++AV SG ++GGN GAT TY FA+LPI+FLG+GST+PGLI+A I+V K R DP+Y  RRI HE
Sbjct:   13 PEEIQQKLISVAIEAKSADAAEQVATLDALKESGDLRLWGVSQAPTFKATNIGQLQREYGLDAITLGLAAEDSLDELKAALFAVTAFSSIMAVLSGVVVGGNAGATLTYLFAVLPIIFLGVGSTAPGLISAVIEVGKTRLDPKYGERRIKHE 164          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: A0A835ZE95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE95_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.590e-22
Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 1
Query:  430 IDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVSRRILHE 666
            +DDLKYALG VVA S + AVASG ++GGN GA+ TY FAI+PI+FLGIGS+SPG+I AAI++ K R D E+ SRR+ HE
Sbjct:    3 LDDLKYALGAVVAFSAISAVASGVIVGGNTGASLTYLFAIIPILFLGIGSSSPGIIVAAINLFKIRFDSEFQSRRVHHE 81          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: D7FLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 8.330e-22
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1
Query:  430 IDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVSRRILHE 666
            +DDLKYALG+V   SF  AV  G  IGGNVGA+FTY FA+LPIVFLGIGST+PG+I A I+ V+ +S  +Y  RR+ HE
Sbjct:    1 MDDLKYALGFVCIFSFAAAVGVGAAIGGNVGASFTYFFALLPIVFLGIGSTAPGVITAVINNVRRKSQDDYEERRVRHE 79          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: A0A8J2WKW2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WKW2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.230e-14
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  295 LDALKAKGVLGKWGSGSF--GEAWSVSQGQLKSVAGIDGKAFDIDGGIDDLKYALGYVVAGSFV----LAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVK-ARSDPEYVSRRILHE 666
            L +LK  G   KW S +     A + ++ ++++  GI+G A D+    +     LG + AG FV    LA+ASG LIGGNVGA+FTY FA+LPIVFLG+GS+SPG+I A   +V+ A  D     RR  HE
Sbjct:  126 LSSLKEAGQATKWNSAALVADGAENPTEARVRAATGING-AKDLLSQEEVSNDQLGALTAGVFVVSAILAIASGALIGGNVGASFTYIFAVLPIVFLGVGSSSPGVIVALYGIVRGAAEDLAASERRRRHE 255          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: F0YGW1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGW1_AURAN)

HSP 1 Score: 77.4 bits (189), Expect = 8.340e-13
Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 1
Query:  289 AALDALKAKGVLGKWGSGSFGEAWSV--SQGQLKSVAGIDGKAFDI----DGGIDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVSRRILHE 666
            A L +LKA G    W S     A +   ++ ++++  GI+G A D+    + G D+L     +V   S +LAV SG LIGGN+GA FTY FA+LPI+FLG+GS+SPG+I A     K   +     RR  HE
Sbjct:  795 ATLGSLKADGKAPAWASRELVAAGAEVPTEARVRAATGING-AKDLLAQEEVGNDELLQITAFVFVTSAILAVGSGALIGGNLGAAFTYIFAVLPIIFLGVGSSSPGVILAVYGATKQAKE-NTAPRRRRHE 924          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: A0A7S2RM93_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RM93_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.180e-11
Identity = 56/142 (39.44%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  295 LDALKAKGVLGKWGSGSFG----------EAWSVSQGQLKSVAG--IDGKAF----DIDGGIDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVS--RRILHE 666
            LD+L + G L  W S   G            + VS   L+S +G  + GK      D+D  +DD+K A   V  G+  L +AS   +  N+GAT  Y FA++PIVFLGIGSTSPGLIA  I + K  +D E     R + HE
Sbjct:  119 LDSLVSSGDLSMWKSAQRGPVGTQSPAPLRTFPVSIKTLESRSGGKLSGKTLGVEGDVDVSLDDIKDATIAVTLGATALGIASLAFLPQNIGATLCYLFALIPIVFLGIGSTSPGLIADGIAIFKGTADDEVKKEDRVVRHE 260          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: W7T524_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T524_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.890e-11
Identity = 70/216 (32.41%), Postives = 100/216 (46.30%), Query Frame = 1
Query:   31 MEQAAKLRAEANDAENAMRTAKGLEPAPVATKAMATATVPSETATAAAVAPPAAPIATVVTTSTTPQELAAKIMGALSVEGAPARRAALDA----LKAKGVLGKWGSGSFGEAWSVSQGQLKSVAGIDGKAFDIDGGIDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPEYVSRRILHE 666
            +++AAKLR EA   E  ++  +   P PV T+                   PA P         TP+ L+ + + A  VE A A  A +D     LK  G L K+ SGS       S  Q +   G   +  +  G  DDLK+ALG V+A S  LAV  G  +GG  G    Y F ++PI F+GIGS +PG+I+  + +V    D +   R+  H+
Sbjct:   91 LDRAAKLRQEAEKLEQELKAVQASRPKPVVTEEK-----------------PAGP---------TPRYLSFEQLKA-EVEQAMASSAVVDTALKQLKESGALTKFESGSAKGFRRYSAEQFEQATGFPPQDVESGGTQDDLKWALGAVMAASS-LAVVGGGFLGGFAGTLLVYLFLLIPITFIGIGSVAPGVISVFVVLVSNLLDGKAAERKTTHQ 278          
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Match: A0A7S4MBA1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBA1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.890e-10
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 1
Query:  274 APARRAALDALKAKGVLGKWGSGSFGEAWSVSQGQLK------------SVAGIDGKAFDIDG----GIDDLKYALGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIAAAIDVVKARSDPE 639
            A ++ A+LDA+   G    W + + G A + SQ  L+            S   + G++  + G     +DD K A   V  GS V A+AS  L+  NVGAT  Y FA++P+ F+GIGST+PG+IA AI   +  SD +
Sbjct:  118 ASSQAASLDAIVESGDFALWKAAATGAAGTSSQAPLRPYPVSLNFLEQRSGGKLTGESLGVSGEMDVSLDDFKDATIAVTLGSTVAAIASLALLPENVGATLCYLFALIPVGFIGIGSTAPGIIAGAISSFQGTSDDQ 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10055.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V1Y0_9STRA2.940e-2650.41Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S3UVY9_HETAK3.590e-2647.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2C0S6_9STRA2.330e-2545.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZE95_9STRA2.590e-2264.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FLX1_ECTSI8.330e-2262.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2WKW2_9STRA1.230e-1444.27Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YGW1_AURAN8.340e-1340.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2RM93_9STRA1.180e-1139.44Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
W7T524_9STRA5.890e-1132.41Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4MBA1_9STRA1.890e-1036.23Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10055contigP-wetherbeei_contig10055:1590..2255 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog159749.K0TKC4
Model size666
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.21e-06
EggNOG OGs28PSE@1|root,2QWEW@2759|Eukaryota,2XC5J@2836|Bacillariophyta
Cds size666
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185852.1116714-CDS-P-wetherbeei_contig10055:1589..22551683185852.1116714-CDS-P-wetherbeei_contig10055:1589..2255Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10055 1590..2255 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10055.2.1prot_P-wetherbeei_contig10055.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10055 1590..2255 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10055.2.1

>prot_P-wetherbeei_contig10055.2.1 ID=prot_P-wetherbeei_contig10055.2.1|Name=mRNA_P-wetherbeei_contig10055.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=222bp
MSGVEEAKKLMEQAAKLRAEANDAENAMRTAKGLEPAPVATKAMATATVP
SETATAAAVAPPAAPIATVVTTSTTPQELAAKIMGALSVEGAPARRAALD
ALKAKGVLGKWGSGSFGEAWSVSQGQLKSVAGIDGKAFDIDGGIDDLKYA
LGYVVAGSFVLAVASGTLIGGNVGATFTYGFAILPIVFLGIGSTSPGLIA
AAIDVVKARSDPEYVSRRILHE
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mRNA from alignment at P-wetherbeei_contig10055:1590..2255+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10055.2.1 ID=mRNA_P-wetherbeei_contig10055.2.1|Name=mRNA_P-wetherbeei_contig10055.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig10055:1590..2255+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCAGGTGTTGAGGAAGCGAAAAAGTTGATGGAACAAGCAGCGAAGCT CAGGGCGGAAGCGAACGACGCTGAGAATGCGATGAGAACAGCGAAAGGCT TGGAGCCGGCACCAGTTGCAACGAAGGCGATGGCGACGGCGACGGTGCCA TCCGAAACTGCCACAGCCGCTGCCGTCGCCCCTCCCGCGGCTCCCATTGC CACAGTGGTTACCACCAGCACCACGCCACAGGAGCTGGCCGCCAAGATTA TGGGCGCCCTCTCCGTGGAGGGCGCCCCGGCGCGGCGGGCTGCCCTCGAC GCGCTCAAGGCGAAGGGCGTCCTGGGGAAATGGGGGTCGGGATCGTTCGG CGAAGCATGGTCCGTCTCGCAGGGCCAGCTCAAGAGCGTCGCCGGCATCG ACGGCAAGGCGTTCGACATCGACGGCGGCATCGACGACCTGAAGTACGCG CTCGGATACGTGGTGGCGGGCAGCTTCGTTTTGGCGGTGGCGAGCGGCAC TCTTATAGGCGGCAACGTGGGCGCCACGTTCACATACGGCTTTGCCATTC TGCCCATTGTCTTTCTGGGCATCGGGAGTACGTCACCGGGCCTCATCGCG GCGGCCATCGACGTGGTGAAGGCGCGGTCGGACCCGGAGTACGTCAGCAG AAGGATCCTTCATGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10055:1590..2255+

>mRNA_P-wetherbeei_contig10055.2.1 ID=mRNA_P-wetherbeei_contig10055.2.1|Name=mRNA_P-wetherbeei_contig10055.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig10055:1590..2255+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCAGGTGTTGAGGAAGCGAAAAAGTTGATGGAACAAGCAGCGAAGCT
CAGGGCGGAAGCGAACGACGCTGAGAATGCGATGAGAACAGCGAAAGGCT
TGGAGCCGGCACCAGTTGCAACGAAGGCGATGGCGACGGCGACGGTGCCA
TCCGAAACTGCCACAGCCGCTGCCGTCGCCCCTCCCGCGGCTCCCATTGC
CACAGTGGTTACCACCAGCACCACGCCACAGGAGCTGGCCGCCAAGATTA
TGGGCGCCCTCTCCGTGGAGGGCGCCCCGGCGCGGCGGGCTGCCCTCGAC
GCGCTCAAGGCGAAGGGCGTCCTGGGGAAATGGGGGTCGGGATCGTTCGG
CGAAGCATGGTCCGTCTCGCAGGGCCAGCTCAAGAGCGTCGCCGGCATCG
ACGGCAAGGCGTTCGACATCGACGGCGGCATCGACGACCTGAAGTACGCG
CTCGGATACGTGGTGGCGGGCAGCTTCGTTTTGGCGGTGGCGAGCGGCAC
TCTTATAGGCGGCAACGTGGGCGCCACGTTCACATACGGCTTTGCCATTC
TGCCCATTGTCTTTCTGGGCATCGGGAGTACGTCACCGGGCCTCATCGCG
GCGGCCATCGACGTGGTGAAGGCGCGGTCGGACCCGGAGTACGTCAGCAG
AAGGATCCTTCATGAG
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