mRNA_P-wetherbeei_contig19697.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19697.1.1
Unique NamemRNA_P-wetherbeei_contig19697.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A0M0K741_9EUKA (Methyltranfer_dom domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K741_9EUKA)

HSP 1 Score: 125 bits (313), Expect = 1.120e-32
Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTAVR 288
            LY EWTHP+FISI  Y +++Q TG +++I TADW+ ETI +W H +  G+  PWP +RRP  WW+ +RDAWC+E M  AFT   GLMQYGM TA +
Sbjct:  238 LYGEWTHPYFISIEEYGRIMQRTGKLQKIVTADWATETIPAWRHSVWVGVWDPWPVIRRPKLWWKVIRDAWCLEIMHRAFTN--GLMQYGMMTATK 331          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A7S0LEW5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LEW5_9EUKA)

HSP 1 Score: 125 bits (315), Expect = 1.590e-32
Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTA 282
            LY EWTHP+FISI  Y +++Q TG +EQ+ T DW+ +TI +W H +  G+  PWP VRRP  WW+TVRDAWC+E M  AFT   GLMQYGM TA
Sbjct:  298 LYGEWTHPYFISIDEYARIMQRTGVLEQVATDDWAAQTIPAWRHSVWVGVWDPWPVVRRPHLWWKTVRDAWCLEVMHRAFTD--GLMQYGMMTA 389          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A6H5KWJ1_9PHAE (Methyltranfer_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWJ1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 9.530e-32
Identity = 56/96 (58.33%), Postives = 73/96 (76.04%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTAVR 288
            LYSEWTHPHFISI  Y KL++GTG +EQ+ET DW+++T  +W   I  G++ PWP++R P  +++TVRDAWCIERM +AF  K GLMQYGM   V+
Sbjct:  360 LYSEWTHPHFISINDYAKLMEGTGQLEQVETDDWAEQTTPTWRLSIWVGVVNPWPWLRVPRSYYKTVRDAWCIERMHQAF--KKGLMQYGMIKGVK 453          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A7S1U0P4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0P4_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.210e-31
Identity = 54/97 (55.67%), Postives = 70/97 (72.16%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTAVRL 291
            LY EWTHP+FISI +Y++L+ GTG M  + TADW++ET  SW H +  GI  P+ +V +P  WW+T+RDAW +ERM  AF  K GLMQYGMF A +L
Sbjct:  152 LYEEWTHPYFISIKSYEELMNGTGKMSGVGTADWNEETRPSWRHSVWVGIADPFFWVTKPRLWWKTIRDAWTLERMHRAF--KKGLMQYGMFRATKL 246          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A7S0P4H4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P4H4_9EUKA)

HSP 1 Score: 121 bits (303), Expect = 7.010e-31
Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFT 279
            LY EWTHP+FISI  Y +++Q TG +EQ+ T DW+ +TI +W H +  G+  PWP  RRP  WW+T+RDAWC+E M  AFT   G+MQYGM T
Sbjct:  288 LYGEWTHPYFISIDEYARIMQRTGVLEQVATDDWAAQTIPAWRHSVWVGVWDPWPVARRPRLWWKTIRDAWCLEVMHRAFTG--GVMQYGMMT 378          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A7S3XPM8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPM8_HETAK)

HSP 1 Score: 120 bits (302), Expect = 1.590e-30
Identity = 54/96 (56.25%), Postives = 70/96 (72.92%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTAVR 288
            LYSEWTHPHFISI  Y KL++GTG ME++ +A+W+ ETI SW H I  G  +PW  VRRP  WW+T++D +C+E+M  AF  + GLM YGMF A +
Sbjct:  308 LYSEWTHPHFISIEDYVKLIEGTGKMEKVGSANWADETIPSWRHAIYEGAFRPWFVVRRPHLWWKTLKDCYCMEKMHRAF--EKGLMTYGMFYATK 401          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A482SQH6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQH6_9ARCH)

HSP 1 Score: 109 bits (273), Expect = 3.580e-29
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTAVR 288
            LYSEWTHP FISI AY KL+  T  +  I+T DW+K TI SWLH +  GI  PWP   +P  WW+T RD   + RM ++F  + GLMQYGM TA +
Sbjct:    5 LYSEWTHPFFISIDAYRKLMDNTNKLASIKTDDWTKTTIASWLHSVWVGIFDPWPVFSKPRVWWKTFRDGLTLVRMHKSF--RSGLMQYGMMTATK 98          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A835ZA13_9STRA (MPBQ/MSBQ transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA13_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.250e-28
Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRR-PLRW---WRTVRDAWCIERMREAFTPKLGLMQYGMFTAVR 288
            LYSEWTHPHFISI  Y KL+ GTG ++ I TADW+ +TI SW H I  GI  PW ++ R  LRW   W+T +DAWC+ERM +AF+   GLM+YGM  A++
Sbjct:  311 LYSEWTHPHFISIQDYAKLMDGTGQLDNISTADWTVQTIASWRHTIWMGIKCPWIWIPRCGLRWALWWKTFKDAWCLERMSQAFSA--GLMEYGMMKAIK 408          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A7S3HQH5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQH5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.350e-28
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTA 282
            LYSEWTHPHFISI  Y KL+QGTG ++ +ETADW+ +T+ SWLH I  G+  PW    +P  +W+  RD   + RM ++F  KL  MQYGM TA
Sbjct:   63 LYSEWTHPHFISISDYAKLMQGTGRLQNVETADWTPQTLPSWLHSIWVGVFDPWIVFSQPRLYWKCFRDGLTLVRMHQSFKSKL--MQYGMMTA 154          
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Match: A0A7S2UUJ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUJ1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.370e-28
Identity = 49/96 (51.04%), Postives = 65/96 (67.71%), Query Frame = 1
Query:    1 LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGILKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTAVR 288
            LYSEWTHP FIS   Y +L++GTG MEQ+ T DW+KET+ SW H I  G+ +PW   +RP  WW+T++D WC+ +M  AF    GLM YGM   ++
Sbjct:  336 LYSEWTHPFFISYEDYGRLVEGTGTMEQVVTDDWAKETLPSWRHAIYDGLFRPWFIAQRPHLWWKTLKDIWCMNKMHLAFEE--GLMTYGMIKGIK 429          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19697.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0M0K741_9EUKA1.120e-3255.21Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A0A7S0LEW5_9EUKA1.590e-3258.51Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A6H5KWJ1_9PHAE9.530e-3258.33Methyltranfer_dom domain-containing protein n=2 Ta... [more]
A0A7S1U0P4_9STRA2.210e-3155.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0P4H4_9EUKA7.010e-3154.84Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S3XPM8_HETAK1.590e-3056.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482SQH6_9ARCH3.580e-2953.13Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835ZA13_9STRA1.250e-2856.00MPBQ/MSBQ transferase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3HQH5_9STRA1.350e-2853.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2UUJ1_9STRA4.370e-2851.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19697contigP-wetherbeei_contig19697:1..548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FUJ0
PFAMsCMAS,Methyltransf_11,Methyltransf_25,Methyltransf_31
Model size303
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC01662
KEGG koko:K05928,ko:K18534
KEGG ReactionR07236,R07501,R07504,R10491,R10492,R10709,R10710
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00112
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.1e-33
EggNOG OGsCOG0500@1|root,KOG1269@2759|Eukaryota
EC2.1.1.295,2.1.1.95
Descriptionsterol 24-C-methyltransferase activity
Cds size303
COG categoryQ
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186179.0978513-CDS-P-wetherbeei_contig19697:0..421683186179.0978513-CDS-P-wetherbeei_contig19697:0..42Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19697 1..42 +
1683186179.1067183-CDS-P-wetherbeei_contig19697:287..5481683186179.1067183-CDS-P-wetherbeei_contig19697:287..548Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19697 288..548 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19697.1.1prot_P-wetherbeei_contig19697.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19697 1..548 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19697.1.1

>prot_P-wetherbeei_contig19697.1.1 ID=prot_P-wetherbeei_contig19697.1.1|Name=mRNA_P-wetherbeei_contig19697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
LYSEWTHPHFISILAYDKLLQGTGAMEQIETADWSKETIDSWLHIIVAGI
LKPWPFVRRPLRWWRTVRDAWCIERMREAFTPKLGLMQYGMFTAVRLVCS
S
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mRNA from alignment at P-wetherbeei_contig19697:1..548+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19697.1.1 ID=mRNA_P-wetherbeei_contig19697.1.1|Name=mRNA_P-wetherbeei_contig19697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=548bp|location=Sequence derived from alignment at P-wetherbeei_contig19697:1..548+ (Phaeothamnion wetherbeei SAG_119_79)
CTCTACTCCGAGTGGACGCATCCCCATTTCATCTCCATACTAGTAAGGAA TTGAGAGGACAGCGGCGGGAGATCCCCAATGTCGATTGTTGTCGATGGCT ATGACTGCCAGAAAGGAGAACGGTTTCGGTGGGAGCCGCCGGATTGCAAA TCGATTCCTGCTTTGCATCTGTCGTTTCTTATGTTGTTTGGTTTCTTTTG CATTTTTCCAGCCGCTGTCGCTGACTGACTTGCTTCGCTGCTGCCGCTGC CGCCGCCGCCGGCGGCCGTCATCATCGCCGATCACAGGCGTACGACAAGC TGCTGCAGGGGACGGGCGCGATGGAGCAGATTGAGACGGCGGACTGGTCC AAGGAGACGATCGACTCATGGCTCCACATCATCGTCGCCGGCATCCTCAA GCCATGGCCCTTTGTACGTCGGCCACTCCGCTGGTGGCGCACCGTGCGGG ACGCATGGTGCATCGAGCGCATGCGGGAGGCCTTCACTCCCAAGCTCGGC CTCATGCAGTACGGAATGTTCACCGCGGTGCGTTTGGTCTGCTCGTCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19697:1..548+

>mRNA_P-wetherbeei_contig19697.1.1 ID=mRNA_P-wetherbeei_contig19697.1.1|Name=mRNA_P-wetherbeei_contig19697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig19697:1..548+ (Phaeothamnion wetherbeei SAG_119_79)
CTCTACTCCGAGTGGACGCATCCCCATTTCATCTCCATACTAGCGTACGA
CAAGCTGCTGCAGGGGACGGGCGCGATGGAGCAGATTGAGACGGCGGACT
GGTCCAAGGAGACGATCGACTCATGGCTCCACATCATCGTCGCCGGCATC
CTCAAGCCATGGCCCTTTGTACGTCGGCCACTCCGCTGGTGGCGCACCGT
GCGGGACGCATGGTGCATCGAGCGCATGCGGGAGGCCTTCACTCCCAAGC
TCGGCCTCATGCAGTACGGAATGTTCACCGCGGTGCGTTTGGTCTGCTCG
TCT
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