mRNA_P-wetherbeei_contig19667.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19667.1.1
Unique NamemRNA_P-wetherbeei_contig19667.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A350T623_9CHLR (Uncharacterized protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A350T623_9CHLR)

HSP 1 Score: 255 bits (651), Expect = 1.880e-73
Identity = 184/431 (42.69%), Postives = 244/431 (56.61%), Query Frame = 1
Query:    1 DRWVNGENAKVQRWQDLAQIAHALGLNRAETNALLMAAGQPSLAVLERQGLGEADRLLLAPW----PNHLPASVVPVRVSRFVGREQDLADLIAVLKTE--RMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPSAAYKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVA-AHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            +RW+   +      + L ++  AL L+RA+ +  L AAG P++  L       A   L+A W    PN+LPA +     + F+GRE ++ +L   L     R+V L+G GGSGKTRL+L +AR +   F DG  FV L+ VRDP +V+ AI   +G    +  G      + A+L     LLVLDN E V+  GP + ALL +AP +T L TSR  L + GEH + V P  VP+P   ++++AS+PAV LF  RAR A+    LTA TAP +AA+CARL GLPLAIELVAAR+ D SL  +   +  PLDLA DGPRDV+ R   LRETIAWS  LL    Q+ F+ LGV  G F     A VG   S   AE+   L+A +A A L+ +     G   +P Y M  TIR+YA E L   G+ E A   HA
Sbjct:   41 NRWLRSASDAPYHREGLLRLLAALQLSRAQASRALRAAGLPTIDALAADPELSA---LVARWRVRAPNNLPADL-----TSFIGREDEVTNLAEQLSDPAVRLVALTGAGGSGKTRLSLRVARELFDVFTDGVTFVALANVRDPGQVLPAIGAALGLA--ETAGASPAVRVTAWLAPRHALLVLDNLEQVIDCGPALAALLRSAPRLTILATSRVPLAISGEHRWPVRPFAVPSPDLPFEKLASSPAVELFTQRARAADPAFTLTAATAPDMAALCARLDGLPLAIELVAARIGDFSLPDLVATVPDPLDLASDGPRDVALRHRALRETIAWSERLLPITAQQLFASLGVLHG-FDESLAAGVGKGPSV-AAEAIPDLLATLADASLIER----VGDDSAPHYRMLATIREYALERLDALGEHEAAAARHA 455          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A7V9N3R0_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9N3R0_9CHLR)

HSP 1 Score: 251 bits (640), Expect = 5.470e-71
Identity = 173/387 (44.70%), Postives = 224/387 (57.88%), Query Frame = 1
Query:  127 LAVLERQGLGEADRLLLAPWPNHLP--------ASVVPVRVSRFVGREQDLADLIAVLKTERMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVP-----APSAAYKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQM 1245
            LA   R+G     RL  AP P   P        AS +P  V   VGRE++LA+L  +L + R+VTL+G GG GKTRLALE AR+V+PR+ DGA  VDL+ +RDP  V+ A++  IG +  +  G  +   LAA + E  +LL+LDN E V  AGP I AL+ A P +T L TSR  L VRGE +Y V PLP+P       +A   ++A  PAVALF  RA+ A     LT +    +AA+C RL GLPLAIEL AARVR L+   +  ++  PLD+      DV  RQ TLR+TIAWS ALLD   Q  F  L VFAG +T E   AV A+      ++  +L  L+   LV  + E       PRYTM ETIR++A E LA  G++
Sbjct:  237 LAAAIREG-----RLTPAPPPPAPPLTDVRIAAASRLPAAVDIPVGRERELAELQRLLASSRLVTLTGPGGIGKTRLALETARVVEPRYPDGAALVDLAPLRDPTLVLPAVSRAIGVE--ESAGQPIGELLAASIGERHLLLILDNLEQVAEAGPGIAALMTACPNLTFLATSRVRLRVRGEQEYPVSPLPLPDLPTSGIAALMPDLARTPAVALFVRRAQAARPDFRLTPENVSAVAAVCHRLDGLPLAIELAAARVRVLTPDHLLRRMARPLDVLGMTAADVPARQRTLRDTIAWSHALLDPDEQMLFRRLSVFAGSWTLEGAEAVAASADEPAFDTVETLAGLIDHSLVNARHEGEKAEVEPRYTMLETIREFAIEQLAASGEI 616          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: UPI0019AD231B (Tetratricopeptide repeat protein n=1 Tax=Chloroflexales bacterium TaxID=2725990 RepID=UPI0019AD231B)

HSP 1 Score: 243 bits (621), Expect = 9.560e-70
Identity = 176/439 (40.09%), Postives = 237/439 (53.99%), Query Frame = 1
Query:    7 WVNGENAKVQRWQDLAQIAHALGLNRAETNALLMAAGQPSLAVLERQGLGEADRLLLAPWPNHLPA---------SVVPVRVSRFVGREQDLADLIAVLKTE--RMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVP--APSAAYKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRS----LVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            W++G   + + WQDL ++A+AL L+ A  + +L AAG   +A L  Q   +AD+ LLAPW     A         S +P   +  VGRE++LA +  +L     R++TL+G GG GKT LAL  A  VQ RF DGA+FV L+ + DP  V + IA  +G    +     L  +L A L+   +LLVLDNFEH+L A   +  LL AAP +  L+TSR  L + GE++  V PL +P        + +  +PAVALF  RA+   R   LT   A  IA IC RL GLPLAIEL AAR + LS   +  +L + L L   GP  +  RQ TLR T+ WS  LLD   Q   + L VF GG+T EA+  +  A +P   ++       L+ L+   LVR+           RYTM ETIR+YAAE L+  G  E   R HA
Sbjct:   38 WLDGRVTRPRHWQDLVKVANALRLSEAAASDVLQAAGHLPVAALAAQANTQADQALLAPWRGAASAALPVPLARRSALPTPATHLVGRERELAAVETLLGKPDVRLLTLTGAGGVGKTLLALACAANVQDRFADGAFFVPLAPLTDPQLVATTIARVLGIS--EGADQSLSAALTAHLRLKHILLVLDNFEHLLDASGLVADLLAAAPNLKLLITSRRVLRLYGEYEVVVAPLALPDLRTGVTVEHLRESPAVALFVQRAQTIQRDFMLTRLNAAVIAEICVRLDGLPLAIELAAARSKLLSPKGLLARLANRLGLLTWGPHHLPPRQQTLRGTLDWSYGLLDPDSQHLLAQLAVFMGGWTIEAVEEI--ASTPGGTQTPTGVIDGLMTLIDNSLVRQSDSATSED---RYTMLETIREYAAERLSATGVAEAVHRRHA 469          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A7W1TNN5_9CHLR (AAA family ATPase n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1TNN5_9CHLR)

HSP 1 Score: 244 bits (624), Expect = 1.280e-69
Identity = 178/428 (41.59%), Postives = 241/428 (56.31%), Query Frame = 1
Query:    7 WVNGENAKVQRWQDLAQIAHALGLNRAETNALLMAAGQPSLAVLERQGLGEADRLLLAPWPNHLPASVVPVRVSRFVGREQDLADLIAVLKTERMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYL----VLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPSAAY--KEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            W+ G       +  L ++A AL L+++E   LL +AG  S+  L  Q    A+  LL PW    P ++ P  V+ FVGR   L  L+ +L+  R+VTL+G GGSGKTRLAL++A  + P F DG +FV L+ + DP+ VI AIA ++G      T   L  SL+  LQ+YL    +LLVLDNFE V+AAGP +  LL  A G+  LVTS+  L +  EH +AV  L VPA   A   KE+A N AV LF DRA+ A   + LT      I A+C +L GLPL+IEL AARV  + L  M +Q+ + LDL V G  D+  R  +LR T+ WS  LLD   Q  F  L +F GG + +A AAV   M          L +LV   LV++     G  G+PR+ + ETIR+YA E L    +++  R+ HA
Sbjct:   39 WLRGRVKHPHTFDQLLKVAAALRLSKSEATQLLHSAGHKSIDELLAQATSPAELALLKPWRITTPHNL-PSEVTSFVGRGALLDALVRLLEKARLVTLTGRGGSGKTRLALQIATKLLPSFPDGIFFVPLAPLSDPELVIPAIAQSLGVT----TSGGL--SLSERLQDYLRHKQILLVLDNFEKVMAAGPTVAQLLPPAAGLKLLVTSQVPLQLYAEHIFAVPSLEVPAAKTALTLKELACNEAVRLFLDRAQAAGADIALTEANLTAIVALCRQLEGLPLSIELAAARVPLILLPLMVEQMHARLDLLVHGALDLPERHQSLRGTLDWSYNLLDQAEQLLFRRLAIFVGGCSLDAAAAVCGGMPVRA-----GLTSLVQKSLVQQV---TGMHGTPRFMLLETIREYAWEHLEASRELDLIRQHHA 451          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A7V9VD36_9CHLR (XRE family transcriptional regulator (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VD36_9CHLR)

HSP 1 Score: 235 bits (599), Expect = 1.740e-68
Identity = 162/368 (44.02%), Postives = 214/368 (58.15%), Query Frame = 1
Query:  193 HLPASVVPVRVSRFVGREQDLADLIAVLKTE--RMVTLSGEGGSGKTRLALELARIVQPRFD-GAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPSAA------YKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            HLPA + P+     +GRE ++A + A+L  +  R+VTL+G GG GKTRLALE+A  +  RF  GA FV L+AVRDPD V + +A  +G +  +R G  L+  LA  L++  +LLVLDN EHV+ A P +  LL A P +T L TSR  L + GEH++ V PL VPA  AA        +++  P+V LF  RA  A+    L A  AP +AA+C RL GLPLAIEL AAR R L    +  +L   L L   G RD   R  T+R+TIAWS  LL    +  F  L V  GG T EA+AAV         +   ++ +LV  +L+R+  + A  GG PRY M ETIR+Y  E L+  G+ E  RRAHA
Sbjct:   98 HLPAPLTPL-----IGRETEVAAVSALLARDDVRLVTLTGPGGVGKTRLALEVADQMSGRFAAGAEFVPLAAVRDPDLVAATVARELGVR--ERGGRALVERLATALRDRHLLLVLDNLEHVIGAAPLVADLLAACPRLTVLGTSRVTLRLTGEHEFPVPPLAVPAGRAATDTVTAVDDLSRVPSVRLFVARATAADPAFALNAANAPAVAALCQRLDGLPLAIELAAARARHLPPEALLPRLARRLPLLTGGRRDAPARHRTMRDTIAWSYDLLPVAERAVFRRLAVLIGGGTLEAVAAVAGVPGDLAVDPLDAVSSLVENNLLRRVDDGADVGGEPRYAMWETIREYGLERLSESGEEEATRRAHA 458          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A7V1QS29_9CHLR (Tetratricopeptide repeat protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1QS29_9CHLR)

HSP 1 Score: 240 bits (612), Expect = 1.100e-67
Identity = 170/368 (46.20%), Postives = 208/368 (56.52%), Query Frame = 1
Query:  148 GLGEADRLLLAPWPNHLPASVVPVRVSRFVGREQDLADLIAVLKTERMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPSAA--YKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQ 1242
            G  EA      P P   P + +P  ++ F+GRE +L     +L T R+VTL+G GGSGKTRLALELA    P F DGA+FVDLS V DP  V +AIA  +G Q    T   +L ++  FL++  +LLVLDNFE V AA P +V LL+AAP V  LVTSR+ L VRGEH+  V PLPVP P        +A     ALF DRAR       LT   A  +A ICARL GLPLAIEL A  VR LS   +  +L   L     G RD+  R  TL +TIAWS  LL A  QR F  LG FAGG+T EA  AV    +        +L AL A+ L+  + E       PR+ M +TIR+YA E LA  G+
Sbjct:  124 GAAEAPPGDYIPAPAAAPRTNLPAPLTSFIGREPELEVGGRLLATARLVTLTGPGGSGKTRLALELAARALPGFADGAWFVDLSGVTDPALVPAAIAHVLGVQ---ETRTPVLEAVKGFLRDRALLLVLDNFEQVSAAAPTVVELLQAAPRVKVLVTSRAALRVRGEHELPVPPLPVPDPRRLPPVPALAEYAGTALFLDRARAVRPDFALTPDNARAVAEICARLDGLPLAIELAAVHVRILSPRLLAARLERRLPALTGGMRDLPTRHRTLADTIAWSYDLLSAEEQRVFRRLGAFAGGWTLEAAEAVCTDDALEGVRLVEALNALAASSLIIVEHE-----DPPRFRMLQTIREYAQERLAESGE 483          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A535VL76_9CHLR (LuxR family transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535VL76_9CHLR)

HSP 1 Score: 239 bits (609), Expect = 7.310e-67
Identity = 158/361 (43.77%), Postives = 217/361 (60.11%), Query Frame = 1
Query:  202 ASVVPVRVSRFVGREQDLADLIAVL-KTE-RMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPSAA--YKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            +S +P+ ++  +GRE+++A    +L + E R++TL+G GG GKTRLAL++A  ++  F DG  FV L+ +RDP+ V+  IA  +G +         L  L A L+E+ +LLVLDNFE V+ A P +V L  A P +  LVTSR  LHVRGEHD+AV PL +P P      +++    AVALF +RAR     +  T + AP +A IC RL GLPLAIEL AAR++ LSL  + ++L   L L   GPRD+  RQ TLR TIAWS  LL    +R F LL VF GG T EA+  + +A     A     + +L+  HL+ +  +       PR+ M ETIR+YA E LA  G++E AR AHA
Sbjct:  119 SSTLPLPLTSLIGREREVAAASTLLLRLEIRLLTLTGPGGVGKTRLALQIATELRDDFPDGVCFVSLAPIRDPELVLPTIAQALGLRVSHTRAP--LELLKAALREHHLLLVLDNFEQVVMAAPSLVELFAACPHLKLLVTSREVLHVRGEHDFAVLPLTLPDPQHLPDREQLTRYGAVALFLERAREVQPTLQFTDEHAPLVAEICRRLDGLPLAIELAAARLKLLSLPALLNRLEHRLQLLTGGPRDLPARQHTLRNTIAWSYDLLSEEEKRLFRLLSVFVGGATLEAVEHMSSAFGGESARILDGMASLLDKHLLYRAEQDTN---GPRFHMLETIREYALEALAASGELEAARLAHA 474          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A4P6JL22_9CHLR (HTH luxR-type domain-containing protein n=1 Tax=Ktedonosporobacter rubrisoli TaxID=2509675 RepID=A0A4P6JL22_9CHLR)

HSP 1 Score: 236 bits (602), Expect = 1.280e-66
Identity = 151/360 (41.94%), Postives = 214/360 (59.44%), Query Frame = 1
Query:  205 SVVPVRVSRFVGREQDLADLIAVLKTE--RMVTLSGEGGSGKTRLALELARIVQPRFD-GAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPS--AAYKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            S +P+ ++  VGRE +++ +  +L     R++TL+G GG GKTRLAL +A  +Q  F  G YFV L+++ D + V+ A+   +G    +R     L  L A L    +LLVLDNFEHV+AA P +V LL   P +  LVTSR  LHVRGE ++ V PL +P P   +  + +A + AV LF +RAR     + L A TAP +  IC RL GLPLA+EL AAR++ LSL ++ D+L+  LD+   GPRD+  RQ TLR+TI+WS  LL    +R F LL VF  G T EA   V + +    A+    + +L+  HL+ K  +       PR+ + ET+R+YA E LA  G++E AR+ HA
Sbjct:   10 SRLPIPLTSLVGREAEVSTICTLLACSDLRLLTLTGMGGVGKTRLALSVANQLQKDFPAGVYFVSLASIGDVELVLPALVQALGLSSGEREP---LELLQAELATQRLLLVLDNFEHVIAAAPSLVQLLTTCPDLKLLVTSREVLHVRGEREFVVMPLALPDPQDLSTGEALARSSAVTLFLERAREVQPALQLNALTAPLLGEICRRLDGLPLALELAAARLKVLSLHELLDRLSHRLDILTGGPRDLPGRQQTLRQTISWSYELLSDDEKRLFRLLAVFVNGCTLEAAEVVYSRVGGERAQVLDGITSLLNKHLLYKSEQ---ENHQPRWLLHETLREYALEVLAASGELEKARQVHA 363          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A7W0Z0A5_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0Z0A5_9ACTN)

HSP 1 Score: 237 bits (605), Expect = 2.160e-66
Identity = 155/358 (43.30%), Postives = 217/358 (60.61%), Query Frame = 1
Query:  211 VPVRVSRFVGREQDLADLIAVLKTE--RMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPSAA--YKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            +P++ +  +GREQ +A+++A+++ E  R+ TL+G GGSGKTRL+L++A  +   F DG +FVDL+A+ DP  +I  +  T+  +  ++ G  L  +L  +L++  +LLVLDNFE +L AGP + ALL  AP + ALVTSR+ LH+ GEH+Y+V PL VP   A+     +A+   V LF +RA+       LT + AP +A ICARL GLPLAIEL AARVR LS   +  +L+  L L   G RD   RQ TLR+TI WS  LL A  QR F+ + VF GG T  A  AV    +   A     + +LV   L+R+   PA     PR+ M ETIR+YA + L   G+ E  R+ HA
Sbjct:  195 LPIQPTSLIGREQQVAEVVALVRREDIRLATLTGTGGSGKTRLSLQVAAELVADFEDGVFFVDLAAITDPHLIIPTVGQTLSVR--EKPGQSLFETLKDYLRDKHLLLVLDNFEQLLDAGPAVSALLAGAPSLKALVTSRAPLHLSGEHEYSVPPLAVPDLEASEPLATLAAYEGVQLFVERAQAVKPEFELTGENAPAVAEICARLDGLPLAIELGAARVRILSPQALLGRLSQRLALLTGGARDAPARQRTLRDTIEWSYGLLSASEQRLFARISVFVGGRTINAAEAVCDPAAELGAAVFDGVASLVEKSLLRQDEGPADE---PRFFMLETIREYAIDRLERSGEGELLRQRHA 547          
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Match: A0A6J4TP22_9CHLR (TIR domain-containing protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4TP22_9CHLR)

HSP 1 Score: 236 bits (601), Expect = 3.190e-66
Identity = 178/428 (41.59%), Postives = 233/428 (54.44%), Query Frame = 1
Query:    4 RWVNGENAKVQRWQDLAQIAHALGLNRAETNALLMAAGQPSLAVLERQGLGEADRLLLAPWPNHLP----ASVVPVRVSRFVGREQDLADLIAVLKTERMVTLSGEGGSGKTRLALELARIVQPRF-DGAYFVDLSAVRDPDRVISAIADTIGFQPPDRTGDRLLP-SLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGVTALVTSRSFLHVRGEHDYAVDPLPVPAPSAAYKEIASNPAVALFADRARNANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTSPLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTREAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPETIRDYAAETLAGQGQMEDARRAHA 1269
            +WV   + K   W  L ++  AL  +      L      PSLA+                 P H P     + +P  ++  +GR+ ++A+L+ +L T R+VTL+G GG GKTRLA+E+AR+    F DG  FVDLS VRDPD V+ A A  +G +      D  +P +LAA + +   LLVLDN E V+ A P I ALL A P +  L TSR+ L VRGE    V+P PV A +A+   +A++PA  LFA+RA        LT    P +AAIC+RL GLPLAIEL AARV+ L+   +  +L   L L   GPRD+  RQ TLR  IAWS  LL A  Q  F  L VFAGG+T EA  A GAA      +    L  LV   LVR++    G GG+ R+ M ETIR++A E L   G+    R AHA
Sbjct:  111 QWVEVLDRKEDAW--LPEVVRALARSGVAPGPLA-----PSLAIP----------------PEHPPLAHAVAWLPTPLTALLGRDAEVAELVGLLATHRLVTLTGPGGVGKTRLAVEVARVAAAGFPDGVAFVDLSPVRDPDLVLPAAAHVLGVR---EAPDVPVPEALAAAIGDRRTLLVLDNLEQVIEAAPAIAALLAACPHLAVLATSRAPLAVRGERVLPVEPFPVQAAAASLGVLAASPAARLFAERAAAVKPGFALTEDNLPAVAAICSRLDGLPLAIELAAARVKLLTPEALLARLDGRLPLLTSGPRDLPDRQRTLRGAIAWSHDLLSAKEQVLFRRLAVFAGGWTPEA--AEGAANPDGALDIWAELAGLVDHSLVRQE---EGSGGA-RFRMLETIREFALERLELSGEAASFRDAHA 506          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19667.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A350T623_9CHLR1.880e-7342.69Uncharacterized protein n=3 Tax=Chloroflexi bacter... [more]
A0A7V9N3R0_9CHLR5.470e-7144.70Tetratricopeptide repeat protein n=1 Tax=Chlorofle... [more]
UPI0019AD231B9.560e-7040.09Tetratricopeptide repeat protein n=1 Tax=Chlorofle... [more]
A0A7W1TNN5_9CHLR1.280e-6941.59AAA family ATPase n=1 Tax=Herpetosiphonaceae bacte... [more]
A0A7V9VD36_9CHLR1.740e-6844.02XRE family transcriptional regulator (Fragment) n=... [more]
A0A7V1QS29_9CHLR1.100e-6746.20Tetratricopeptide repeat protein n=2 Tax=Chlorofle... [more]
A0A535VL76_9CHLR7.310e-6743.77LuxR family transcriptional regulator n=1 Tax=Chlo... [more]
A0A4P6JL22_9CHLR1.280e-6641.94HTH luxR-type domain-containing protein n=1 Tax=Kt... [more]
A0A7W0Z0A5_9ACTN2.160e-6643.30Tetratricopeptide repeat protein n=1 Tax=Actinomyc... [more]
A0A6J4TP22_9CHLR3.190e-6641.59TIR domain-containing protein n=1 Tax=uncultured T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19667contigP-wetherbeei_contig19667:2..1270 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1150399.AQYK01000001_gene1288
PFAMsAAA_22,BTAD,DUF4062,NB-ARC,TPR_12
Model size1269
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.77e-64
EggNOG OGsCOG0457@1|root,COG3903@1|root,COG0457@2|Bacteria,COG3903@2|Bacteria,2GIZ1@201174|Actinobacteria,4FN63@85023|Microbacteriaceae
DescriptionTranscriptional regulator
Cds size1269
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186178.419352-CDS-P-wetherbeei_contig19667:1..12701683186178.419352-CDS-P-wetherbeei_contig19667:1..1270Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19667 2..1270 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19667.1.1prot_P-wetherbeei_contig19667.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19667 2..1270 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19667.1.1

>prot_P-wetherbeei_contig19667.1.1 ID=prot_P-wetherbeei_contig19667.1.1|Name=mRNA_P-wetherbeei_contig19667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=423bp
DRWVNGENAKVQRWQDLAQIAHALGLNRAETNALLMAAGQPSLAVLERQG
LGEADRLLLAPWPNHLPASVVPVRVSRFVGREQDLADLIAVLKTERMVTL
SGEGGSGKTRLALELARIVQPRFDGAYFVDLSAVRDPDRVISAIADTIGF
QPPDRTGDRLLPSLAAFLQEYLVLLVLDNFEHVLAAGPRIVALLEAAPGV
TALVTSRSFLHVRGEHDYAVDPLPVPAPSAAYKEIASNPAVALFADRARN
ANRHVHLTAQTAPTIAAICARLGGLPLAIELVAARVRDLSLAQMQDQLTS
PLDLAVDGPRDVSRRQSTLRETIAWSTALLDAWGQRWFSLLGVFAGGFTR
EAMAAVGAAMSPHLAESSRSLVALVAAHLVRKQPEPAGRGGSPRYTMPET
IRDYAAETLAGQGQMEDARRAHA
back to top

mRNA from alignment at P-wetherbeei_contig19667:2..1270-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19667.1.1 ID=mRNA_P-wetherbeei_contig19667.1.1|Name=mRNA_P-wetherbeei_contig19667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1269bp|location=Sequence derived from alignment at P-wetherbeei_contig19667:2..1270- (Phaeothamnion wetherbeei SAG_119_79)
GATCGCTGGGTCAATGGCGAGAACGCGAAGGTTCAGCGATGGCAGGATCT GGCCCAGATCGCCCACGCGCTCGGCCTCAATCGCGCTGAGACCAACGCGC TCCTGATGGCTGCCGGTCAGCCCTCGCTGGCCGTCCTGGAACGGCAGGGG CTGGGCGAGGCCGACCGGCTGCTGCTCGCTCCCTGGCCCAACCATCTGCC GGCCTCCGTGGTGCCGGTGCGCGTCTCCCGGTTCGTGGGACGCGAGCAGG ACCTGGCCGATCTGATCGCGGTCCTCAAGACGGAGCGGATGGTCACGCTC TCGGGCGAAGGCGGTTCCGGGAAGACGCGGCTGGCGCTCGAACTCGCGCG GATCGTGCAACCCCGGTTCGATGGCGCCTACTTCGTCGACCTCTCGGCGG TTCGCGATCCGGATCGCGTCATCTCCGCGATTGCCGACACCATCGGATTC CAGCCACCGGACCGCACCGGCGACCGTCTCCTGCCGTCGCTGGCCGCCTT TCTGCAGGAGTATCTGGTGCTGCTGGTGCTGGACAACTTCGAGCACGTCC TGGCGGCAGGGCCACGGATCGTGGCCCTGCTGGAGGCAGCCCCCGGCGTG ACGGCGCTCGTCACCAGCCGCTCATTCCTCCACGTGCGCGGCGAACACGA CTACGCGGTGGACCCATTGCCAGTCCCCGCACCGTCGGCCGCCTACAAGG AGATCGCGAGCAACCCGGCGGTGGCCCTCTTCGCCGATCGTGCCCGGAAC GCCAATCGTCACGTCCATCTCACCGCCCAGACCGCGCCCACGATTGCCGC CATCTGCGCGCGCCTCGGCGGCCTTCCGCTGGCAATCGAGCTGGTGGCCG CCCGCGTGCGCGACCTGTCGCTGGCCCAGATGCAGGATCAGCTCACGTCG CCGCTGGACCTGGCCGTCGATGGGCCGCGTGATGTCTCCCGCCGCCAATC GACGCTGCGGGAGACGATCGCCTGGTCGACCGCGTTGCTGGATGCGTGGG GCCAGCGGTGGTTCAGCCTCCTTGGCGTCTTCGCGGGAGGCTTCACGCGG GAGGCGATGGCCGCGGTGGGCGCCGCGATGAGCCCCCACCTCGCCGAGAG CTCTCGCAGCCTGGTCGCGCTGGTTGCCGCCCATCTGGTGCGCAAGCAGC CCGAGCCCGCCGGCCGGGGGGGAAGCCCGCGCTATACGATGCCGGAGACC ATCCGCGACTATGCCGCGGAGACGCTCGCCGGCCAGGGGCAGATGGAGGA TGCCCGACGGGCTCATGCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19667:2..1270-

>mRNA_P-wetherbeei_contig19667.1.1 ID=mRNA_P-wetherbeei_contig19667.1.1|Name=mRNA_P-wetherbeei_contig19667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1269bp|location=Sequence derived from alignment at P-wetherbeei_contig19667:2..1270- (Phaeothamnion wetherbeei SAG_119_79)
GATCGCTGGGTCAATGGCGAGAACGCGAAGGTTCAGCGATGGCAGGATCT
GGCCCAGATCGCCCACGCGCTCGGCCTCAATCGCGCTGAGACCAACGCGC
TCCTGATGGCTGCCGGTCAGCCCTCGCTGGCCGTCCTGGAACGGCAGGGG
CTGGGCGAGGCCGACCGGCTGCTGCTCGCTCCCTGGCCCAACCATCTGCC
GGCCTCCGTGGTGCCGGTGCGCGTCTCCCGGTTCGTGGGACGCGAGCAGG
ACCTGGCCGATCTGATCGCGGTCCTCAAGACGGAGCGGATGGTCACGCTC
TCGGGCGAAGGCGGTTCCGGGAAGACGCGGCTGGCGCTCGAACTCGCGCG
GATCGTGCAACCCCGGTTCGATGGCGCCTACTTCGTCGACCTCTCGGCGG
TTCGCGATCCGGATCGCGTCATCTCCGCGATTGCCGACACCATCGGATTC
CAGCCACCGGACCGCACCGGCGACCGTCTCCTGCCGTCGCTGGCCGCCTT
TCTGCAGGAGTATCTGGTGCTGCTGGTGCTGGACAACTTCGAGCACGTCC
TGGCGGCAGGGCCACGGATCGTGGCCCTGCTGGAGGCAGCCCCCGGCGTG
ACGGCGCTCGTCACCAGCCGCTCATTCCTCCACGTGCGCGGCGAACACGA
CTACGCGGTGGACCCATTGCCAGTCCCCGCACCGTCGGCCGCCTACAAGG
AGATCGCGAGCAACCCGGCGGTGGCCCTCTTCGCCGATCGTGCCCGGAAC
GCCAATCGTCACGTCCATCTCACCGCCCAGACCGCGCCCACGATTGCCGC
CATCTGCGCGCGCCTCGGCGGCCTTCCGCTGGCAATCGAGCTGGTGGCCG
CCCGCGTGCGCGACCTGTCGCTGGCCCAGATGCAGGATCAGCTCACGTCG
CCGCTGGACCTGGCCGTCGATGGGCCGCGTGATGTCTCCCGCCGCCAATC
GACGCTGCGGGAGACGATCGCCTGGTCGACCGCGTTGCTGGATGCGTGGG
GCCAGCGGTGGTTCAGCCTCCTTGGCGTCTTCGCGGGAGGCTTCACGCGG
GAGGCGATGGCCGCGGTGGGCGCCGCGATGAGCCCCCACCTCGCCGAGAG
CTCTCGCAGCCTGGTCGCGCTGGTTGCCGCCCATCTGGTGCGCAAGCAGC
CCGAGCCCGCCGGCCGGGGGGGAAGCCCGCGCTATACGATGCCGGAGACC
ATCCGCGACTATGCCGCGGAGACGCTCGCCGGCCAGGGGCAGATGGAGGA
TGCCCGACGGGCTCATGCC
back to top