prot_P-wetherbeei_contig1965.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1965.5.1
Unique Nameprot_P-wetherbeei_contig1965.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length127
Homology
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: D8LGL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGL2_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.420e-64
Identity = 103/126 (81.75%), Postives = 112/126 (88.89%), Query Frame = 0
Query:    1 MLARCSPPQSLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            +L R     SLVISPEFQHILRILNTNIDGRRKV ++LT+I GVGRRF+NLICKKAEVD NKRAGE+TADEIEKLVAIIQNPRQF+IPDWFLNRQKDWKTGK +QI SQ I  KLR+DLERLKKIR
Sbjct:   33 VLLRRVRAMSLVISPEFQHILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIR 158          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: A0A6T5XJF3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5XJF3_9STRA)

HSP 1 Score: 200 bits (508), Expect = 6.330e-64
Identity = 95/118 (80.51%), Postives = 111/118 (94.07%), Query Frame = 0
Query:    9 QSLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            ++L+  PEFQHILRILNTN++G+R V+F LT I G+GRRF++LICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQF+IP WFLNRQKDWKTGK+SQIF+QNIAAKLR+D+ER+KKIR
Sbjct:    3 EALMQGPEFQHILRILNTNVEGKRNVVFGLTKINGLGRRFADLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFKIPTWFLNRQKDWKTGKYSQIFAQNIAAKLRDDIERMKKIR 120          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: A0A7S2BE88_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BE88_9STRA)

HSP 1 Score: 197 bits (502), Expect = 6.110e-63
Identity = 96/117 (82.05%), Postives = 108/117 (92.31%), Query Frame = 0
Query:   10 SLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            SL+ISP+FQHILRILNTNIDG RKVMF+LTAI G+GRRF+NLICKKAEVD NKRAGELT DE+EKLVAIIQNP+QF+IP WFLNRQKD+KTG++ Q FS N+ AKLREDLERLKKIR
Sbjct:    2 SLIISPDFQHILRILNTNIDGTRKVMFSLTAITGIGRRFANLICKKAEVDPNKRAGELTQDEVEKLVAIIQNPKQFKIPMWFLNRQKDYKTGRYQQAFSNNLGAKLREDLERLKKIR 118          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: A0A6H5KYA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA8_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 6.310e-63
Identity = 99/117 (84.62%), Postives = 107/117 (91.45%), Query Frame = 0
Query:   10 SLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            SLVISPEFQHILRILNTNIDGRRKV ++LT+I GVGRRF+NLICKKAEVD NKRAGE+TADEIEKLVAIIQ PRQF+IPDWFLNRQKDWKTG  +QI SQ I  KLR+DLERLKKIR
Sbjct:    2 SLVISPEFQHILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAIIQTPRQFKIPDWFLNRQKDWKTGTTTQISSQTIDQKLRDDLERLKKIR 118          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: A0A836C976_9STRA (Ribosomal protein S13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C976_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.050e-62
Identity = 97/116 (83.62%), Postives = 105/116 (90.52%), Query Frame = 0
Query:   11 LVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            LV+ P+FQHILRILNTNIDGR KVM+ALT + GVGRRFSNLICKKAEVD  KRAG LTADEIEKLVAIIQNPRQF++PDWFLNRQ+DWKTGK  Q F+QNIA KLREDLERLKKIR
Sbjct:    1 LVVGPDFQHILRILNTNIDGRIKVMYALTKVPGVGRRFSNLICKKAEVDHTKRAGMLTADEIEKLVAIIQNPRQFKVPDWFLNRQRDWKTGKSGQTFAQNIAQKLREDLERLKKIR 116          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: F0XYV2_AURAN (Uncharacterized protein n=4 Tax=Pelagomonadales TaxID=54409 RepID=F0XYV2_AURAN)

HSP 1 Score: 196 bits (497), Expect = 3.890e-62
Identity = 95/117 (81.20%), Postives = 108/117 (92.31%), Query Frame = 0
Query:   10 SLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            SLVISP+FQHILR+LNTNIDGRRKVMFALT+I GVGRRFSN++CKKA VD +KRAGELTADE+EKLVAIIQNP+QF+IP WFLNRQKD+KTGK+SQ F+  +  KLREDLERLKKIR
Sbjct:    5 SLVISPDFQHILRVLNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAIIQNPKQFKIPAWFLNRQKDYKTGKYSQAFANTLQQKLREDLERLKKIR 121          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: A0A7S2YG43_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YG43_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.380e-61
Identity = 92/117 (78.63%), Postives = 110/117 (94.02%), Query Frame = 0
Query:   10 SLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            SL+   EFQHILRILNTN++G+R V+FA+T IGG+GRRFS+LICKKAEVDVNKRAGELTADEIEK+VA+IQNPRQF+IP WFLNRQKD+KTGK+SQ+F+QNIAA LR+D+ER+KKIR
Sbjct:    4 SLMQGAEFQHILRILNTNVEGKRNVVFAMTKIGGIGRRFSDLICKKAEVDVNKRAGELTADEIEKIVAVIQNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNIAASLRDDVERMKKIR 120          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: B7GB86_PHATC (Predicted protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=B7GB86_PHATC)

HSP 1 Score: 193 bits (491), Expect = 2.460e-61
Identity = 93/117 (79.49%), Postives = 110/117 (94.02%), Query Frame = 0
Query:   10 SLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            SL+  PEFQHILRILNTN++G+R V+F LT I G+GRRFS+LICKKAEVDV+KRAGELTADEIEK+VA+IQNPRQF+IP WFLNRQKD+KTGK+SQ+F+QNIAAKLR+D+ERLKKIR
Sbjct:    4 SLMQGPEFQHILRILNTNVEGKRNVVFGLTKIPGIGRRFSDLICKKAEVDVDKRAGELTADEIEKVVAVIQNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNIAAKLRDDIERLKKIR 120          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: B8BTA9_THAPS (RS18, ribosomal protein 18 40S small ribosomal subunit n=11 Tax=Bacillariophyta TaxID=2836 RepID=B8BTA9_THAPS)

HSP 1 Score: 189 bits (480), Expect = 1.170e-59
Identity = 90/117 (76.92%), Postives = 108/117 (92.31%), Query Frame = 0
Query:   10 SLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            S++  PEFQHILRILNTN++G+R V+F LT I G+GRRF++LICKKAE+DVNKRAGELTADEIEKLVAIIQNPRQF+IP WFLNRQKD+KTGK+SQ+F+QN  AKLR+D+ER+KKIR
Sbjct:    4 SMMQGPEFQHILRILNTNVEGKRNVVFGLTKIKGLGRRFADLICKKAEIDVNKRAGELTADEIEKLVAIIQNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNFDAKLRDDIERMKKIR 120          
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Match: A0A0K8RQ59_IXORI (40S ribosomal protein S18 (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A0K8RQ59_IXORI)

HSP 1 Score: 187 bits (475), Expect = 9.280e-59
Identity = 91/118 (77.12%), Postives = 105/118 (88.98%), Query Frame = 0
Query:    9 QSLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSNLICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKTGKFSQIFSQNIAAKLREDLERLKKIR 126
            QSLVI  +FQHILR+LNTNIDGRRKVMFALTAI GVGRRFSN++CKKA+VD+NKRAGELT +E+EKL+ I+ NPRQ++IPDWFLNRQKD K GKFSQ+ S  +  KLREDLERLKKIR
Sbjct:    8 QSLVIPDKFQHILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIMSNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIR 125          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1965.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL2_ECTSI2.420e-6481.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6T5XJF3_9STRA6.330e-6480.51Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2BE88_9STRA6.110e-6382.05Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5KYA8_9PHAE6.310e-6384.62Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A836C976_9STRA1.050e-6283.62Ribosomal protein S13 n=1 Tax=Tribonema minus TaxI... [more]
F0XYV2_AURAN3.890e-6281.20Uncharacterized protein n=4 Tax=Pelagomonadales Ta... [more]
A0A7S2YG43_9STRA2.380e-6178.63Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7GB86_PHATC2.460e-6179.49Predicted protein n=4 Tax=Bacillariophyta TaxID=28... [more]
B8BTA9_THAPS1.170e-5976.92RS18, ribosomal protein 18 40S small ribosomal sub... [more]
A0A0K8RQ59_IXORI9.280e-5977.1240S ribosomal protein S18 (Fragment) n=1 Tax=Ixode... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001892Ribosomal protein S13PIRSFPIRSF002134RPS13p_RPS13a_RPS18e_RPS13ocoord: 9..126
e-value: 1.6E-20
score: 71.3
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 22..126
e-value: 2.0E-34
score: 118.7
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 23..126
score: 20.457123
NoneNo IPR availableGENE3D1.10.8.50coord: 9..88
e-value: 1.0E-35
score: 123.8
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 10..126
NoneNo IPR availablePANTHERPTHR10871:SF340S RIBOSOMAL PROTEIN S18-RELATEDcoord: 10..126
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 21..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1965contigP-wetherbeei_contig1965:5629..6167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1965.5.1mRNA_P-wetherbeei_contig1965.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1965 5629..6167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1965.5.1 ID=prot_P-wetherbeei_contig1965.5.1|Name=mRNA_P-wetherbeei_contig1965.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp
MLARCSPPQSLVISPEFQHILRILNTNIDGRRKVMFALTAIGGVGRRFSN
LICKKAEVDVNKRAGELTADEIEKLVAIIQNPRQFQIPDWFLNRQKDWKT
GKFSQIFSQNIAAKLREDLERLKKIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001892Ribosomal_S13
IPR010979Ribosomal_S13-like_H2TH