prot_P-wetherbeei_contig1960.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1960.1.1
Unique Nameprot_P-wetherbeei_contig1960.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length88
Homology
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BLAST of mRNA_P-wetherbeei_contig1960.1.1 vs. uniprot
Match: D7G361_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G361_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 5.010e-8
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    1 DFCVRQKRGCDGGHPTCEQCRKRGMPCAYSRRRKSGPR 38
            ++CV  KRGC GG P C+QC KRG PC Y++RRKSGPR
Sbjct:   21 NYCVSSKRGCSGGEP-CDQCEKRGKPCIYAQRRKSGPR 57
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1960.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G361_ECTSI5.010e-865.79Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 1..63
e-value: 4.8E-7
score: 31.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 1..34
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 1..34
e-value: 1.1E-6
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1960contigP-wetherbeei_contig1960:782..1560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1960.1.1mRNA_P-wetherbeei_contig1960.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1960 782..1560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1960.1.1 ID=prot_P-wetherbeei_contig1960.1.1|Name=mRNA_P-wetherbeei_contig1960.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp
DFCVRQKRGCDGGHPTCEQCRKRGMPCAYSRRRKSGPRLFAGKAKPPGAR
RRQPRPRHLGPRAAAAAAAAAAAAAVAPAAALAGSAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd