mRNA_P-wetherbeei_contig1957.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 9.940e-16 Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 7 EEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLL---AGSGGSEAERSLAMCVCIDILEHCGEGA--TPLAAELTPVLLQAVSEESSAI---QQAAVYGLGVAAEKGGIHF 339
E+ E ++L SV D GW+IK R A LP ++ + P V LL A + + RS +C+ ID+LEHCGEG + A L P LLQ + A +QA YGLGVAAE GG F
Sbjct: 806 EDGEEELLVSVVDATGWMIKGRKEAFLPAFEAVMRPLVLQLLDPAAPAAVPPSHRSFGLCMAIDVLEHCGEGGRNSVFQAPLLPALLQGARGDDPAAASTRQACAYGLGVAAELGGQDF 924
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: A0A835ZDS9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS9_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.870e-15 Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 7 EEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLL-----AGSGGSE-------AERSLAMCVCIDILEHCGEGATPLAAELTPVLLQAVSEESSA-IQQAAVYGLGVAAEKGG 330
+EWE DMLTS TDG+GW++K+R A L L ++ LP + L AG + R+LA+C CID+ EHCG A A L A+++ ++A ++QAA YGLGV A GG
Sbjct: 1097 DEWEYDMLTSCTDGLGWIVKARRGAALALYEAHALPTMGALASPPPQAGXXXXXXXXXTPASHRALALCSCIDVAEHCGGAAQRHAPALLAAARAALADGAAADLRQAAAYGLGVLAAHGG 1217
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: A0A6H5JBE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE6_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 6.120e-15 Identity = 50/119 (42.02%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 7 EEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLL---AGSGGSEAERSLAMCVCIDILEHCGEGA--TPLAAELTPVLLQAVSEESSAI---QQAAVYGLGVAAEKGGIHF 339
E+ E ++L SV D GW+IK R LP ++ + P V LL A + + RS +C+ ID+LEHCGEG + A L P LLQ + A +QA YGLGVAAE GG F
Sbjct: 284 EDGEEELLVSVVDATGWMIKGRKETFLPAFEAVMRPLVVQLLDPAAVAAVPPSHRSFGLCMAIDVLEHCGEGGRNSVFQAPLLPALLQGARGDDPAAASTRQACAYGLGVAAELGGQDF 402
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: A0A8J5XMA5_DIALT (TOG domain-containing protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XMA5_DIALT) HSP 1 Score: 75.1 bits (183), Expect = 1.960e-13 Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 16 ERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEAERSLAMCVCIDILEHCGE--GATPLAAELTPVLLQAVSEESSAIQQAAVYGLGVAAEKGGIHF 339
E +L+ + + IG +K+ L L S +LP V LLA S ++R+ AMCV DI+EHC G+ P TPVL+Q ++ES++++QAAVYGLGV A+ G F
Sbjct: 853 EETLLSQIVECIGQGLKAYHSPFLALLSSSILPRVQALLAPER-SASDRTAAMCVFDDIIEHCSADGGSAPFVTLGTPVLIQYATDESASVRQAAVYGLGVLAQHAGAAF 961
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: D8LD05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD05_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 3.620e-13 Identity = 47/117 (40.17%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 16 ERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEA-----ERSLAMCVCIDILEHCGEGA--TPLAAELTPVLLQAVSEE--SSAIQQAAVYGLGVAAEKGGIHF 339
E +ML SV D GW+I+ R A LP ++ L P V PLL + + A RS A+ + ID+LE GEG L P LLQ E+ +++ +Q YGLGVAA+ GG F
Sbjct: 582 EEEMLVSVADATGWMIRGRKAAFLPTFEAVLRPLVLPLLDSTAAAAAALPSSHRSFALSIAIDVLELAGEGGRRAVFPEPLLPALLQGCREDELAASARQVCAYGLGVAADFGGPEF 698
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: A0A453B8A5_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453B8A5_AEGTS) HSP 1 Score: 72.0 bits (175), Expect = 1.590e-12 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 1 EDEEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEAERSLAMCVCIDILEHCGEGATPLAAELTPVLLQAVSEESSAIQQAAVYGLGVAAEKGGIHF 339
E+ E E ++ V + +G LIK+ + LP EL +V P+L G + ER +A+C+ DI E C E A P LL+A ++++S ++QAAVYGLGV AE GG+ F
Sbjct: 72 EENEQEEEVFDQVGECLGTLIKTFKASFLPFFD-ELSVYVTPML-GKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGLTF 182
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: A0A453B898_AEGTS (Uncharacterized protein n=4 Tax=Triticinae TaxID=1648030 RepID=A0A453B898_AEGTS) HSP 1 Score: 72.0 bits (175), Expect = 2.270e-12 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 1 EDEEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEAERSLAMCVCIDILEHCGEGATPLAAELTPVLLQAVSEESSAIQQAAVYGLGVAAEKGGIHF 339
E+ E E ++ V + +G LIK+ + LP EL +V P+L G + ER +A+C+ DI E C E A P LL+A ++++S ++QAAVYGLGV AE GG+ F
Sbjct: 429 EENEQEEEVFDQVGECLGTLIKTFKASFLPFFD-ELSVYVTPML-GKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGLTF 539
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: A0A446KT14_TRITD (TOG domain-containing protein n=4 Tax=Poaceae TaxID=4479 RepID=A0A446KT14_TRITD) HSP 1 Score: 72.0 bits (175), Expect = 2.310e-12 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 1 EDEEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEAERSLAMCVCIDILEHCGEGATPLAAELTPVLLQAVSEESSAIQQAAVYGLGVAAEKGGIHF 339
E+ E E ++ V + +G LIK+ + LP EL +V P+L G + ER +A+C+ DI E C E A P LL+A ++++S ++QAAVYGLGV AE GG+ F
Sbjct: 571 EENEQEEEVFDQVGECLGTLIKTFKASFLPFFD-ELSVYVTPML-GKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGLTF 681
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: M8A4Y3_TRIUA (Importin-5 n=1 Tax=Triticum urartu TaxID=4572 RepID=M8A4Y3_TRIUA) HSP 1 Score: 72.0 bits (175), Expect = 2.360e-12 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 1 EDEEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEAERSLAMCVCIDILEHCGEGATPLAAELTPVLLQAVSEESSAIQQAAVYGLGVAAEKGGIHF 339
E+ E E ++ V + +G LIK+ + LP EL +V P+L G + ER +A+C+ DI E C E A P LL+A ++++S ++QAAVYGLGV AE GG+ F
Sbjct: 849 EENEQEEEVFDQVGECLGTLIKTFKASFLPFFD-ELSVYVTPML-GKDKTAEERRIAICIFDDIAEQCRESALKYYDTYVPFLLEASNDDNSDVRQAAVYGLGVCAEFGGLTF 959
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Match: A0A5B7BA72_DAVIN (Putative importin-5-like (Fragment) n=2 Tax=asterids TaxID=71274 RepID=A0A5B7BA72_DAVIN) HSP 1 Score: 72.0 bits (175), Expect = 2.360e-12 Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 1 EDEEWERDMLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEAERSLAMCVCIDILEHCGEGATPLAAELTPVLLQAVSEESSAIQQAAVYGLGVAAEKGGIHF 339
E+ E E ++ V D +G LIK+ + LP EL ++ P+ G + ER +A+C+ D+ EHC E A P LL+A ++E+ ++QAAVYG+GV AE GG+ F
Sbjct: 883 EENEQEEELFDQVGDCLGTLIKTFKASFLPFFD-ELSSYLTPMW-GKDKTAEERRIAICIFDDVAEHCREAALKYYDTYLPFLLEACNDETPDVRQAAVYGIGVCAEFGGVVF 993 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1957.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1957.2.1 >prot_P-wetherbeei_contig1957.2.1 ID=prot_P-wetherbeei_contig1957.2.1|Name=mRNA_P-wetherbeei_contig1957.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp MLTSVTDGIGWLIKSRGVAILPLCQSELLPWVWPLLAGSGGSEAERSLAMback to top mRNA from alignment at P-wetherbeei_contig1957:4790..5369+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1957.2.1 ID=mRNA_P-wetherbeei_contig1957.2.1|Name=mRNA_P-wetherbeei_contig1957.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=580bp|location=Sequence derived from alignment at P-wetherbeei_contig1957:4790..5369+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1957:4790..5369+ >mRNA_P-wetherbeei_contig1957.2.1 ID=mRNA_P-wetherbeei_contig1957.2.1|Name=mRNA_P-wetherbeei_contig1957.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig1957:4790..5369+ (Phaeothamnion wetherbeei SAG_119_79)back to top |