prot_P-wetherbeei_contig19549.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19549.1.1
Unique Nameprot_P-wetherbeei_contig19549.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length204
Homology
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: A0A2N2TA64_9PROT (HTH tetR-type domain-containing protein n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-16 TaxID=2013707 RepID=A0A2N2TA64_9PROT)

HSP 1 Score: 339 bits (870), Expect = 5.500e-117
Identity = 170/196 (86.73%), Postives = 183/196 (93.37%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFRA 196
            MTR R+NDY+LKKQVILD AV LIAQKGFDGATMSDVAAACGASKSHLYHYF SKEDLL+AIVKEHIT+QVA LSAIV+EPRPA+ERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLP VQRE+VRK+EQELM+LMV+LLHEINP+RMA AK  SPYALLLFGMVIWTFTWYEK+G ISP ELA+ IS LFLDGFRA
Sbjct:    1 MTRERANDYDLKKQVILDQAVALIAQKGFDGATMSDVAAACGASKSHLYHYFPSKEDLLFAIVKEHITEQVAGLSAIVREPRPASERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPSVQREEVRKLEQELMRLMVSLLHEINPDRMAPAKVHSPYALLLFGMVIWTFTWYEKNGAISPEELAERISELFLDGFRA 196          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: UPI000825E86B (TetR/AcrR family transcriptional regulator n=1 Tax=Hydrogenophaga palleronii TaxID=65655 RepID=UPI000825E86B)

HSP 1 Score: 333 bits (853), Expect = 2.140e-114
Identity = 168/195 (86.15%), Postives = 176/195 (90.26%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFR 195
            MTRVR+NDYE KKQVILDSAV LIAQKGFD ATMSDVAAACGASKSHLYHYF+SKEDLLY IVKEHIT+QVAVL+AIV EP P  ERF RFVGAFVQEGAKSRNHHLVLMNDIKFLPP QREDVRK+EQELM LMV+LL EINPERMA+AK  S YALLLFGMVIWTFTWYEK G ISPAELA+ IS LFLDGFR
Sbjct:    1 MTRVRANDYEFKKQVILDSAVALIAQKGFDAATMSDVAAACGASKSHLYHYFASKEDLLYVIVKEHITEQVAVLTAIVNEPTPPGERFNRFVGAFVQEGAKSRNHHLVLMNDIKFLPPGQREDVRKLEQELMSLMVSLLREINPERMAQAKVNSAYALLLFGMVIWTFTWYEKTGAISPAELAERISDLFLDGFR 195          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: A0A4Q5PBH4_9BURK (TetR/AcrR family transcriptional regulator n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5PBH4_9BURK)

HSP 1 Score: 322 bits (825), Expect = 3.820e-110
Identity = 163/195 (83.59%), Postives = 172/195 (88.21%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFR 195
            MTR R+ DYE KK+ ILD AV LIA KGFDGATM DVA ACG SKSHLYHYF SKEDLLYAIV+EHIT QVAVLSAIV+EPRPA ERFTRFVGAFVQ+GAKSR+HHLVLMNDIKFLP  QREDVRKME ELMQLMV LL EINPE+MA  K QSPYALLLFGMVIWTFTWYEK+GPISPAELAD IS LFL+GFR
Sbjct:    1 MTRARAGDYEDKKRSILDRAVTLIASKGFDGATMIDVANACGTSKSHLYHYFPSKEDLLYAIVREHITGQVAVLSAIVREPRPATERFTRFVGAFVQQGAKSRSHHLVLMNDIKFLPTAQREDVRKMELELMQLMVGLLREINPEKMASVKVQSPYALLLFGMVIWTFTWYEKNGPISPAELADRISDLFLNGFR 195          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: UPI00198FFBC2 (TetR/AcrR family transcriptional regulator n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=UPI00198FFBC2)

HSP 1 Score: 315 bits (806), Expect = 3.100e-107
Identity = 159/196 (81.12%), Postives = 170/196 (86.73%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFRA 196
            MTR R++DYE KK+ ILD AV LIA KGFD ATM DVA ACG SKSHLYHYF SKEDLLYAIVK HITDQV VLSAIV+EPRPA ERF RFVGAFV+EGAKSRNHHLVLMNDIKFLP  QREDVRKMEQ LMQLMV LL EINPE+M+  K QS YALLLFGMVIWTFTWYEK+GPISPAELA+ IS LFL+GFR+
Sbjct:    1 MTRARADDYEHKKRAILDRAVALIASKGFDHATMIDVANACGTSKSHLYHYFPSKEDLLYAIVKAHITDQVTVLSAIVREPRPAVERFARFVGAFVREGAKSRNHHLVLMNDIKFLPTAQREDVRKMEQALMQLMVGLLREINPEKMSAVKVQSSYALLLFGMVIWTFTWYEKNGPISPAELAEKISDLFLNGFRS 196          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: A0A1F4EB58_9BURK (HTH tetR-type domain-containing protein n=1 Tax=Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_64_960 TaxID=1797553 RepID=A0A1F4EB58_9BURK)

HSP 1 Score: 258 bits (658), Expect = 1.240e-84
Identity = 126/196 (64.29%), Postives = 152/196 (77.55%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFRA 196
            MTRVR++DYE K+Q ILD A  LIA+KGFD ATM DVA ACG SKSHLYHYF SKEDLLYAIV+EHIT Q A L+ IV +P  A ERF +F+ AF+Q  A+SRN HL+LMNDIKFLP  Q + +R+ME +L +LM  LL EINPE MA  + Q P++LLLFGM+IWTF+WY + G I+P ELA HIS LF+ GF+A
Sbjct:    1 MTRVRADDYEAKRQTILDKAATLIARKGFDVATMMDVAKACGTSKSHLYHYFPSKEDLLYAIVQEHITTQAAELTRIVAQPLRAEERFAQFIDAFMQGAARSRNEHLILMNDIKFLPKAQLDQIRRMEADLTELMEGLLREINPEFMAEERLQKPFSLLLFGMMIWTFSWYRRTGSITPHELAHHISTLFIHGFKA 196          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: A0A1M3BYC6_9BURK (HTH tetR-type domain-containing protein n=1 Tax=Burkholderiales bacterium 66-5 TaxID=1895728 RepID=A0A1M3BYC6_9BURK)

HSP 1 Score: 257 bits (657), Expect = 1.760e-84
Identity = 128/196 (65.31%), Postives = 151/196 (77.04%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFRA 196
            MTRVR++DYE K+Q ILD A  LIA+KGFD ATM DVA ACGASKSHLYHYFSSKEDLL+AIV EHIT Q A L+ IV +P PA ERF +FV  F+Q  A+SRN HL+LMNDIKFLP  Q + +R++E  L +LM +LL EINPE MA    Q PYALLLFGM+IWTF+WY + G I+P ELA  IS LF+ GF+A
Sbjct:    1 MTRVRADDYEAKRQTILDKAAALIARKGFDVATMLDVAKACGASKSHLYHYFSSKEDLLFAIVHEHITAQAAELNRIVAQPLPAEERFAQFVDTFMQGAARSRNEHLILMNDIKFLPKAQLDQIRRLEANLTELMEDLLREINPEFMAEEHLQKPYALLLFGMMIWTFSWYRRTGSIAPHELAQRISTLFVHGFKA 196          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: A0A0Q7LJE1_9BURK (HTH tetR-type domain-containing protein n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A0Q7LJE1_9BURK)

HSP 1 Score: 254 bits (648), Expect = 4.870e-83
Identity = 123/203 (60.59%), Postives = 151/203 (74.38%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFRAEHVTPAA 203
            MTRVR++DY+ K+Q ILD A  L A+KGF+G+TM +VA ACGASKSHLYHYF+ KEDLL+ IV+ HIT Q+A L  +V +  PA ERF R+V  FV  GA SRN HLVLMNDIKFLP  QR +VRK+E+ ++ L+V +LHEINPE M     + PYA+LLFGM+IWTFTWYEK G I P ELA  IS LF+ GF+ +   P A
Sbjct:    1 MTRVRADDYDDKRQSILDQAAALFARKGFEGSTMIEVAQACGASKSHLYHYFARKEDLLFEIVRVHITAQLAELETVVTQALPAEERFNRYVETFVARGANSRNEHLVLMNDIKFLPDAQRREVRKLEKRIVDLLVGVLHEINPELMPARSPRGPYAMLLFGMIIWTFTWYEKSGAIPPRELAARISQLFVHGFKGQRFVPPA 203          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: UPI001551CB9F (TetR/AcrR family transcriptional regulator n=1 Tax=Caenimonas soli TaxID=2735555 RepID=UPI001551CB9F)

HSP 1 Score: 253 bits (647), Expect = 5.460e-83
Identity = 125/195 (64.10%), Postives = 151/195 (77.44%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFR 195
            MTRVR++DY+ KKQ+IL  A  LIA+KGFD ATM DVA ACG SKSHLYHYF+SKE+LLYAIV EHIT Q   L+ IV +P PA ERFT+FV +FVQ  A+SRN HL+LMND+KFLP  QRE +RK+E E+ +LM  LL EINP+ M   + Q PYALLLFGM+IWTF+WY + G I+P ELA  IS LF+ GF+
Sbjct:    1 MTRVRADDYDDKKQIILGKAAALIARKGFDMATMMDVAKACGTSKSHLYHYFASKEELLYAIVHEHITRQATDLARIVAQPLPAEERFTQFVDSFVQGAARSRNEHLMLMNDLKFLPTGQREHIRKLEIEMTELMEQLLREINPKLMTEERVQKPYALLLFGMMIWTFSWYRRSGEITPRELAQRISELFVHGFK 195          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: UPI0006547971 (TetR/AcrR family transcriptional regulator n=1 Tax=Caenimonas sp. SL110 TaxID=1450524 RepID=UPI0006547971)

HSP 1 Score: 251 bits (642), Expect = 4.540e-82
Identity = 124/203 (61.08%), Postives = 154/203 (75.86%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFRAEHVTPAA 203
            MTRVR++DY+ K+  IL  A  LIA+KGFD ATM DVA ACG SKSHLYHYF SKEDLLYAIV EHIT Q A L+ I+  P PA ERF  F+ +FVQ  A+SR+ H++LMND+KFLP  QRE VRK+E E+  L+  LL EINP+ M++ K ++PYALLL+GM+IWTFTWY ++G I+PAELA  IS LF++GFR   + P A
Sbjct:    1 MTRVRAHDYDDKRNAILGKAATLIARKGFDVATMMDVAQACGTSKSHLYHYFPSKEDLLYAIVHEHITQQAADLARIIHLPLPAEERFGLFIDSFVQGAARSRDEHIMLMNDLKFLPRGQREHVRKLEVEMTSLLEGLLREINPQLMSQQKLETPYALLLYGMMIWTFTWYRRNGSIAPAELAQRISDLFINGFRGAQLLPGA 203          
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Match: A0A2P8KAW2_9BURK (HTH tetR-type domain-containing protein n=2 Tax=Variovorax sp. WS11 TaxID=1105204 RepID=A0A2P8KAW2_9BURK)

HSP 1 Score: 249 bits (635), Expect = 8.600e-80
Identity = 123/195 (63.08%), Postives = 152/195 (77.95%), Query Frame = 0
Query:    1 MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYHYFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGAKSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARAKAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFR 195
            MTRVR+NDYE K+ VIL  A  LIA+KGFD ATM DVA  CG SKSHLYHYF+SKEDLLYAIV +HIT Q A L  IV  P PA ERF +F+ +FVQ  ++SR+ H++LMND+KFLP  QR+ VRK+E E+  LM  LL EINP  MA+ + ++PYALLL+GM+IWTFTWY ++GP++PAELA  IS LF++GFR
Sbjct:   74 MTRVRANDYEDKRNVILRKAAALIARKGFDVATMMDVAEGCGTSKSHLYHYFTSKEDLLYAIVHDHITRQAADLIRIVHLPLPAEERFGQFIDSFVQGASESRDEHIMLMNDLKFLPRGQRDHVRKLEVEMTGLMEGLLREINPRLMAQERVETPYALLLYGMMIWTFTWYRRNGPMAPAELAHRISGLFVNGFR 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19549.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N2TA64_9PROT5.500e-11786.73HTH tetR-type domain-containing protein n=1 Tax=Be... [more]
UPI000825E86B2.140e-11486.15TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A4Q5PBH4_9BURK3.820e-11083.59TetR/AcrR family transcriptional regulator n=1 Tax... [more]
UPI00198FFBC23.100e-10781.12TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A1F4EB58_9BURK1.240e-8464.29HTH tetR-type domain-containing protein n=1 Tax=Bu... [more]
A0A1M3BYC6_9BURK1.760e-8465.31HTH tetR-type domain-containing protein n=1 Tax=Bu... [more]
A0A0Q7LJE1_9BURK4.870e-8360.59HTH tetR-type domain-containing protein n=3 Tax=un... [more]
UPI001551CB9F5.460e-8364.10TetR/AcrR family transcriptional regulator n=1 Tax... [more]
UPI00065479714.540e-8261.08TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A2P8KAW2_9BURK8.600e-8063.08HTH tetR-type domain-containing protein n=2 Tax=Va... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001647DNA-binding HTH domain, TetR-typePRINTSPR00455HTHTETRcoord: 37..60
score: 34.46
coord: 16..29
score: 36.12
IPR001647DNA-binding HTH domain, TetR-typePFAMPF00440TetR_Ncoord: 16..61
e-value: 3.3E-18
score: 65.2
IPR001647DNA-binding HTH domain, TetR-typePROSITEPS50977HTH_TETR_2coord: 10..70
score: 21.722376
IPR041490HTH-type transcriptional repressor KstR2, C-terminalPFAMPF17932TetR_C_24coord: 83..193
e-value: 1.6E-23
score: 83.1
NoneNo IPR availableGENE3D1.10.357.10Tetracycline Repressor, domain 2coord: 54..196
e-value: 1.6E-31
score: 111.5
NoneNo IPR availableGENE3D1.10.10.60coord: 1..53
e-value: 1.7E-19
score: 71.0
NoneNo IPR availablePANTHERPTHR30055HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTRcoord: 3..196
NoneNo IPR availablePANTHERPTHR30055:SF175TRANSCRIPTIONAL REGULATORY PROTEINcoord: 3..196
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilySUPERFAMILY48498Tetracyclin repressor-like, C-terminal domaincoord: 83..196
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19549contigP-wetherbeei_contig19549:224..835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19549.1.1mRNA_P-wetherbeei_contig19549.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19549 224..1045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19549.1.1 ID=prot_P-wetherbeei_contig19549.1.1|Name=mRNA_P-wetherbeei_contig19549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=204bp
MTRVRSNDYELKKQVILDSAVVLIAQKGFDGATMSDVAAACGASKSHLYH
YFSSKEDLLYAIVKEHITDQVAVLSAIVQEPRPAAERFTRFVGAFVQEGA
KSRNHHLVLMNDIKFLPPVQREDVRKMEQELMQLMVNLLHEINPERMARA
KAQSPYALLLFGMVIWTFTWYEKDGPISPAELADHISALFLDGFRAEHVT
PAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001647HTH_TetR
IPR041490KstR2_TetR_C
IPR036271Tet_transcr_reg_TetR-rel_C_sf
IPR009057Homeobox-like_sf