mRNA_P-wetherbeei_contig19537.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19537.1.1
Unique NamemRNA_P-wetherbeei_contig19537.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A2N2ZVJ7_9BACT (FGE-sulfatase domain-containing protein n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-12 TaxID=2013680 RepID=A0A2N2ZVJ7_9BACT)

HSP 1 Score: 256 bits (653), Expect = 8.420e-79
Identity = 145/270 (53.70%), Postives = 189/270 (70.00%), Query Frame = 1
Query:   19 LSILFICLLSFT-AYANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTNSGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVPS---INSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCNVSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTP--DDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLARH 810
            L+IL + + S T  +AN+IAVSN S+  Q+ A ++T V+FDV+W NSWRT++  SNWDAA++FVK+RI          W HATL+  +G  +  GN    PS   IN+++DG+G F+YR ANG GN+++    LRW+YGADG+ D+ +V V VFA+EMVYVPQG FY GD S+  + G FEAG T   F +TSE +LTLGG   GSLGNNN AGM+    +DF+DAA+ TLPA FPKGF AFY MKYEI+Q QY++FLN LT  Q  AR+
Sbjct:   14 LAILLMAIASTTNLFANNIAVSNTSIVNQNTAGNYTHVKFDVSWENSWRTSTLESNWDAAYVFVKYRIP-----PMNTWFHATLNYVDGTAANDGN--TEPSGATINTTSDGKGAFLYRNANGIGNVNFTGARLRWDYGADGLNDDDSVEVCVFAIEMVYVPQGAFYLGDGSVTSVQGNFEAGTTGNPFYLTSEAALTLGGGSVGSLGNNNKAGMANAVWEDFHDAASVTLPALFPKGFNAFYCMKYEITQGQYADFLNKLTLPQATARY 276          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A3A0D4T0_9BACT (FGE-sulfatase domain-containing protein n=3 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0D4T0_9BACT)

HSP 1 Score: 253 bits (646), Expect = 1.060e-77
Identity = 134/270 (49.63%), Postives = 186/270 (68.89%), Query Frame = 1
Query:   19 LSILFICLLSFTAYANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTN------SGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVPSINSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLD-NCNVSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTPDDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLAR 807
            L+ L + L   +A AN++AV + +L   D A    L++FD++W NSWR +      + P N+DAAW+FVK+  +GG+      WQHATLS+ N DH VTG+NG+  ++ ++ DG+G FI+RA NG+G+ +W+ V LRWNY ADG+     +  V V A+EM++VP G+F  GD S  G+ GQFE+G +S  F VTSE +LTLGG G  SLGNNNA GM+  DDF+D+ ++ LPA FPKGFAAFY MKYEI+Q QY++FLN+L+ T+   R
Sbjct:   11 LAALMLGLAGISARANNLAVKHVALKN-DVAGSHVLIQFDLSWDNSWRNDLAGAGQAKPFNYDAAWVFVKYSTDGGSV-----WQHATLSSHNSDHGVTGDNGIPAALQAAPDGKGAFIFRAQNGAGSNNWEDVRLRWNYSADGLTGITSSTIVNVLAIEMIWVPAGSFSVGDVSPSGITGQFESGKSSQPFAVTSEDALTLGGGGANSLGNNNAKGMAHKDDFDDSISKILPAEFPKGFAAFYVMKYEITQGQYADFLNLLSSTEAARR 274          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A7Y5FI23_9BACT (SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5FI23_9BACT)

HSP 1 Score: 249 bits (637), Expect = 2.340e-76
Identity = 134/261 (51.34%), Postives = 179/261 (68.58%), Query Frame = 1
Query:   34 ICLLSFTAYANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTN------SGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVPSINSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCNVSV-KVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTPDDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQ 795
            + L+  +A AN++AV   SL   +AA    LV+FD++W NSWRT+      + P N DAAW+F+K+  +GG       WQHATLSA + DH V+ +NG+  ++ +  DG+G+F++RAANG+G ++W Q  LRWNY ADG+      +V KV AVEMVY+P G+F  GD +   L GQFE GAT  AF +TSE +LTLGG    SLGNNNA GM+  DDF+D  +Q+LPAAFPKG AAFY MKYEI+Q QY++FLN+L P +
Sbjct:   16 LALIGSSARANNLAVKRVSLK-HEAAGSHVLVQFDLSWENSWRTDLPGAGQAQPYNHDAAWVFLKYSSDGGTT-----WQHATLSALSSDHQVSKDNGIAAAVQTVPDGKGLFLFRAANGAGAVNWQQTRLRWNYSADGLTSITPTTVVKVLAVEMVYLPAGSFQLGDPAAASLTGQFERGATGEAFEITSEDALTLGGGEEHSLGNNNAQGMAHKDDFDDHVSQSLPAAFPKGHAAFYVMKYEITQGQYADFLNLLRPAE 270          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A353X0R6_9BACT (FGE-sulfatase domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A353X0R6_9BACT)

HSP 1 Score: 250 bits (639), Expect = 3.270e-76
Identity = 137/270 (50.74%), Postives = 181/270 (67.04%), Query Frame = 1
Query:   19 LSILFICLLSFT---AYANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTNSGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVPS-INSSADGRGVFIYRAANG-SGNIDWDQVLLRWNYGADGVLDNCNVSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMS--TPDDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLAR 807
            L ++ I LL+FT   A+A+ + VSN ++ GQ+   D+TLV FD+ W+NSWR  +  +NWDA W+FVK+R +     +   W HATL+  +G  +  G+     S INS++DG+GV IY ++N     +++    LRWNYG DG++D  +V + VFA+EMVYVPQG+FY GD +   + G FE+G T  A  +TSEG+LTLGG G GSLGNNNA+     TPDDFND  +QTLPAAFPKG+ AFY MKY ISQEQY  FLN LT  QQ  R
Sbjct:   30 LRLVLIGLLAFTSNGAFAHGVVVSNVAINGQNTVLDYTLVNFDITWNNSWRNTAITNNWDACWVFVKYRKK-----SETTWHHATLNYLDGTGAGDGHTAPTGSAINSTSDGKGVMIYSSSNIIPQTVNYTGAKLRWNYGIDGLVDADSVEIAVFAIEMVYVPQGSFYVGDGTSADIQGHFESGTTGTALQITSEGALTLGGGGAGSLGNNNASASDPYTPDDFNDVDSQTLPAAFPKGYNAFYCMKYSISQEQYVAFLNTLTRAQQNTR 294          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A353X0R8_9BACT (FGE-sulfatase domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A353X0R8_9BACT)

HSP 1 Score: 246 bits (629), Expect = 2.150e-75
Identity = 133/239 (55.65%), Postives = 167/239 (69.87%), Query Frame = 1
Query:  115 DFTLVRFDVNWSNSWRTNSGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGD-----HSVTGNNGVVPSINSSADGR-GVFIYRAANG-SGNIDWDQVLLRWNYGADGVLDNCNVSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTP-DDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLAR 807
            D+TLV FD+ WSNSWRT++GPSNWDAAW+FVK+R++         W HATL+ T+G      H+   N+ +  S ++ +DG  GVFI+R A+   G++++  V LRWNYG DG+ D  +V V VFA+EMVYVPQ +FY GD +   +   FE G T AAF +TSEG+LTLGG G GSLGNNNA+G+ T  DDFND  +QTLPAAFPKG+ AFY MKY ISQEQY  FLN LT  QQ  R
Sbjct:    2 DYTLVNFDIAWSNSWRTSTGPSNWDAAWVFVKYRLKNQTT-----WNHATLNYTDGTGSGDGHTEPANSNIASSNDNGSDGAYGVFIHRDADMLQGSVNYTGVQLRWNYGVDGLADADSVEVSVFAIEMVYVPQSSFYVGDGTSSNIQAHFENGTTGAAFQITSEGALTLGGGGAGSLGNNNASGLPTALDDFNDVDSQTLPAAFPKGYNAFYCMKYSISQEQYVAFLNTLTRAQQNTR 235          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A7Y5KCJ3_9BACT (SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5KCJ3_9BACT)

HSP 1 Score: 243 bits (621), Expect = 4.540e-74
Identity = 132/264 (50.00%), Postives = 176/264 (66.67%), Query Frame = 1
Query:   40 LLSFTAYANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTN------SGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVPSINSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCNVS-VKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTPDDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLARH 810
            L   +A AND+ V + +L  +  A     V+ DV+W NSWR +      + P N+DAAW+FVKF  +GGA      WQHATLSA++ DHSV  ++GV  ++ + +DG+GVF++RA NGSG  DWD+V L+WNY  DGV    + + V V  +EMVY+P G+F+ GD S   + GQFE G +     +TSEG+LTLGG   GSLGNNNA GM+  DDF D+ ++TLPAAFPKG AAFY MK EI+Q QY++FLN+LT  Q   R+
Sbjct:   18 LFILSARANDLTVKHVALQNE-IAGSHVAVKLDVSWDNSWRNDLAGAGQAAPFNYDAAWLFVKFSTDGGAT-----WQHATLSASSADHSVGNDHGVPAAMQAVSDGKGVFLFRAQNGSGANDWDEVRLQWNYSGDGVTGITSTTIVNVIGLEMVYIPGGSFFVGDQSPAPINGQFEDGVSGNPLEITSEGALTLGGGSAGSLGNNNAQGMAHADDFKDSVSKTLPAAFPKGHAAFYVMKQEITQGQYADFLNLLTSAQAARRN 275          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: UPI00198FBB51 (Uncharacterized protein n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI00198FBB51)

HSP 1 Score: 233 bits (593), Expect = 1.180e-72
Identity = 130/263 (49.43%), Postives = 169/263 (64.26%), Query Frame = 1
Query:   40 LLSFTAY---ANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTNSGPS---NWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVPSINSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCNVSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTPDDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLARH 810
            L+ FTA    AN++ VS  +LTGQ+AA+ +T ++F+++W NSWR  + PS   NWDA W+F K          PG W+HATLS    DH     NG   ++  S DG+GVFI+RAA G GN+    VLLRWNYG+D +    NV+V+VFAVEMVYVPQG F+ GD +   L GQF  G T+  F +TSE +LTLGG+   +L +      S  DDF  A T+TLP A+PKGF AFY MKYE+SQ+QY++F N LT TQ  A +
Sbjct:   19 LIMFTASGVRANNVQVSTVTLTGQNAASQYTNIQFNLSWENSWRDAAAPSPTDNWDAVWVFAKVSD------APGLWKHATLSTNAADH-----NGQGYTVTPSPDGKGVFIHRAAGGQGNVSLTNVLLRWNYGSDVITSGANVTVRVFAVEMVYVPQGAFFVGDGTTTALQGQFIQGGTTNPFQITSEAALTLGGTAATNLASQTG---SYNDDFTSAVTKTLPDAYPKGFNAFYCMKYEVSQQQYADFRNTLTLTQSNANN 267          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A7Y2HE37_9BACT (SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y2HE37_9BACT)

HSP 1 Score: 232 bits (591), Expect = 1.020e-69
Identity = 130/264 (49.24%), Postives = 173/264 (65.53%), Query Frame = 1
Query:   43 LSFTAYANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTNSGPSNWDAAWIFVKFRIEGGAGCTPGG---WQHATLSATNG--DHSVTGNNGVVPSINSSAD----GRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCNVSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTPDDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLAR 807
            +S ++YAN+I +SN +   QD   D+ ++ FD++W NSWRT++  +NWDAAW+F+KF        TP     WQHA+L   NG  D  V    G++ + N+S      G GVFIYR ++G GNI+++QV LRW+YG DGV D+  + + V A+EMVYVPQG F  GD    G  GQFEAG T   F ++SEG+LTLGG+   +L NN+A      DDFN A TQ+LPA FPKG+ AFY MKYE+SQEQY+ FL+ LT TQ+  R
Sbjct:   12 ISLSSYANNIKISNVTFATQDKNNDYYMIEFDLSWENSWRTSTYETNWDAAWVFIKF--------TPKNIQNWQHASLHYVNGVNDGHVAPTGGIINTANNSYGNANTGIGVFIYRDSDGIGNINFNQVQLRWDYGLDGVGDDDVIEISVHAIEMVYVPQGAFQVGDGM--GDFGQFEAGNTGNPFTISSEGALTLGGTNVNNLSNNDALNQQFADDFNYATTQSLPADFPKGYHAFYCMKYEVSQEQYAAFLSHLTQTQRSDR 265          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A2M8FUR5_9FLAO (FGE-sulfatase domain-containing protein n=2 Tax=unclassified Flavobacteriales TaxID=403978 RepID=A0A2M8FUR5_9FLAO)

HSP 1 Score: 223 bits (567), Expect = 5.370e-66
Identity = 127/253 (50.20%), Postives = 160/253 (63.24%), Query Frame = 1
Query:   61 ANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTNSGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVP-SINSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCNVSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGMSTP--DDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQLARH 810
            AN+IAVSN S+  Q+ AA++T V+FDV+W NSWRT++                            HATL+  +G  +  GN      +IN+++DG+G F+YR  NG GNI +    LRWNYGADG+ D  +V + VFA+EMVYVPQG FY GD S+  + G FE G T   F +TSE +LTLGG G GSLGNNN AGM+ P  +DFNDA    LPAAFPKGF AFY MKYEI+Q  Y++FLN LT  Q  AR+
Sbjct:   29 ANNIAVSNTSIINQNTAANYTHVKFDVSWENSWRTSTXXXXXXXXXXXXXXXXX-----XXXXXXHATLNYVDGTATNDGNTEPAGGTINATSDGKGAFLYRNGNGIGNISFTNAQLRWNYGADGLNDEDSVEICVFAIEMVYVPQGAFYLGDGSVTSVQGNFEDGTTGNPFYLTSEAALTLGGGGAGSLGNNNRAGMANPTWEDFNDATAVALPAAFPKGFNAFYCMKYEITQGMYADFLNKLTLPQANARY 276          
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Match: A0A849NHI3_9BACT (SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A849NHI3_9BACT)

HSP 1 Score: 223 bits (568), Expect = 6.860e-66
Identity = 126/268 (47.01%), Postives = 171/268 (63.81%), Query Frame = 1
Query:   25 ILFICLLSFTAYANDIAVSNASLTGQDAAADFTLVRFDVNWSNSWRTNSG---PSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTGNNGVVPSINSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCNVSVKVFAVEMVYVPQGNFYAGDNSL--GGLAGQFEAGATSAAFLVTSEGSLTLGGSGGGSLGNNNAAGM-----STPDDFNDAATQTLPAAFPKGFAAFYSMKYEISQEQYSEFLNVLTPTQQ 798
            ++FI L++    AN+I++ N +L GQ      T V FD++W NSWR ++    PSNWDA W+F+K++I G        W HATL A +G     G+     +I++S+D +G FIYRA NG+G+++W    L+WNY  DG+ D   V V+VFA+EMV++P  +FY GD++     LAGQ E+  + + FL+T E SLTLGG   GS+GNNN  GM     +  DDFND  +  LPAAFPKGF  FY MKYEISQ+QY +FLN LT  QQ
Sbjct:    9 LIFIFLINNILTANNISIQNVNLVGQ-VNNSHTFVEFDISWDNSWRLDNPSIIPSNWDAVWVFLKYKIAGELS-----WNHATL-AISGHLPAAGS-----TISTSSDAKGAFIYRANNGTGSVNWADTKLKWNYAFDGIADEDQVEVRVFAIEMVFIPGRSFYVGDSTTLTTDLAGQLESQTSGSPFLITGEHSLTLGGGSVGSMGNNNTVGMIDNDSTDTDDFNDLVSVNLPAAFPKGFNGFYIMKYEISQKQYVDFLNTLTRQQQ 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19537.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N2ZVJ7_9BACT8.420e-7953.70FGE-sulfatase domain-containing protein n=1 Tax=Ba... [more]
A0A3A0D4T0_9BACT1.060e-7749.63FGE-sulfatase domain-containing protein n=3 Tax=ca... [more]
A0A7Y5FI23_9BACT2.340e-7651.34SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax... [more]
A0A353X0R6_9BACT3.270e-7650.74FGE-sulfatase domain-containing protein n=1 Tax=Cy... [more]
A0A353X0R8_9BACT2.150e-7555.65FGE-sulfatase domain-containing protein n=1 Tax=Cy... [more]
A0A7Y5KCJ3_9BACT4.540e-7450.00SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax... [more]
UPI00198FBB511.180e-7249.43Uncharacterized protein n=1 Tax=Rhizobacter sp. Ta... [more]
A0A7Y2HE37_9BACT1.020e-6949.24SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax... [more]
A0A2M8FUR5_9FLAO5.370e-6650.20FGE-sulfatase domain-containing protein n=2 Tax=un... [more]
A0A849NHI3_9BACT6.860e-6647.01SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19537contigP-wetherbeei_contig19537:451..1260 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1120966.AUBU01000026_gene524
PFAMsFGE-sulfatase
Model size810
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categorysignal peptide
Exons1
Evalue4.81e-65
EggNOG OGsCOG1262@1|root,COG1262@2|Bacteria,4NKVR@976|Bacteroidetes,47PRM@768503|Cytophagia
DescriptionSulfatase-modifying factor enzyme 1
Cds size810
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186175.47457-CDS-P-wetherbeei_contig19537:450..12601683186175.47457-CDS-P-wetherbeei_contig19537:450..1260Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19537 451..1260 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19537.1.1prot_P-wetherbeei_contig19537.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19537 451..1260 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19537.1.1

>prot_P-wetherbeei_contig19537.1.1 ID=prot_P-wetherbeei_contig19537.1.1|Name=mRNA_P-wetherbeei_contig19537.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
MRPTYYLSILFICLLSFTAYANDIAVSNASLTGQDAAADFTLVRFDVNWS
NSWRTNSGPSNWDAAWIFVKFRIEGGAGCTPGGWQHATLSATNGDHSVTG
NNGVVPSINSSADGRGVFIYRAANGSGNIDWDQVLLRWNYGADGVLDNCN
VSVKVFAVEMVYVPQGNFYAGDNSLGGLAGQFEAGATSAAFLVTSEGSLT
LGGSGGGSLGNNNAAGMSTPDDFNDAATQTLPAAFPKGFAAFYSMKYEIS
QEQYSEFLNVLTPTQQLARH
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mRNA from alignment at P-wetherbeei_contig19537:451..1260+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19537.1.1 ID=mRNA_P-wetherbeei_contig19537.1.1|Name=mRNA_P-wetherbeei_contig19537.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig19537:451..1260+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGACCTACCTATTACCTGAGCATACTTTTTATATGCTTGTTGTCCTT TACTGCCTACGCGAATGATATAGCAGTTAGTAATGCAAGCCTCACGGGGC AAGATGCAGCTGCCGATTTTACGCTTGTAAGATTCGATGTTAACTGGAGC AACTCTTGGCGGACTAACTCAGGCCCTTCAAACTGGGATGCGGCCTGGAT TTTTGTGAAGTTTAGAATAGAAGGAGGAGCAGGTTGTACTCCAGGCGGCT GGCAACATGCCACTTTAAGCGCTACTAACGGAGACCATTCTGTCACTGGT AATAATGGGGTAGTTCCAAGCATTAACTCTTCAGCCGATGGAAGAGGGGT TTTTATCTACCGGGCAGCAAACGGATCGGGTAACATTGACTGGGACCAGG TTTTATTGCGTTGGAACTACGGAGCGGATGGAGTACTTGACAATTGCAAT GTTTCTGTAAAAGTATTTGCAGTGGAGATGGTTTATGTGCCGCAAGGAAA CTTCTATGCTGGCGATAACTCACTTGGAGGCTTGGCAGGTCAATTCGAAG CGGGTGCTACAAGCGCAGCTTTTTTAGTAACCAGTGAAGGTAGTTTAACA CTGGGAGGATCAGGTGGCGGATCATTAGGAAACAATAATGCAGCCGGAAT GTCTACTCCTGATGATTTCAACGATGCAGCAACTCAAACTTTGCCAGCTG CATTTCCAAAAGGATTTGCTGCGTTTTATTCTATGAAATATGAAATCAGC CAGGAGCAATATTCTGAATTTTTAAATGTGCTTACGCCAACGCAACAATT AGCACGACAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19537:451..1260+

>mRNA_P-wetherbeei_contig19537.1.1 ID=mRNA_P-wetherbeei_contig19537.1.1|Name=mRNA_P-wetherbeei_contig19537.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig19537:451..1260+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGACCTACCTATTACCTGAGCATACTTTTTATATGCTTGTTGTCCTT
TACTGCCTACGCGAATGATATAGCAGTTAGTAATGCAAGCCTCACGGGGC
AAGATGCAGCTGCCGATTTTACGCTTGTAAGATTCGATGTTAACTGGAGC
AACTCTTGGCGGACTAACTCAGGCCCTTCAAACTGGGATGCGGCCTGGAT
TTTTGTGAAGTTTAGAATAGAAGGAGGAGCAGGTTGTACTCCAGGCGGCT
GGCAACATGCCACTTTAAGCGCTACTAACGGAGACCATTCTGTCACTGGT
AATAATGGGGTAGTTCCAAGCATTAACTCTTCAGCCGATGGAAGAGGGGT
TTTTATCTACCGGGCAGCAAACGGATCGGGTAACATTGACTGGGACCAGG
TTTTATTGCGTTGGAACTACGGAGCGGATGGAGTACTTGACAATTGCAAT
GTTTCTGTAAAAGTATTTGCAGTGGAGATGGTTTATGTGCCGCAAGGAAA
CTTCTATGCTGGCGATAACTCACTTGGAGGCTTGGCAGGTCAATTCGAAG
CGGGTGCTACAAGCGCAGCTTTTTTAGTAACCAGTGAAGGTAGTTTAACA
CTGGGAGGATCAGGTGGCGGATCATTAGGAAACAATAATGCAGCCGGAAT
GTCTACTCCTGATGATTTCAACGATGCAGCAACTCAAACTTTGCCAGCTG
CATTTCCAAAAGGATTTGCTGCGTTTTATTCTATGAAATATGAAATCAGC
CAGGAGCAATATTCTGAATTTTTAAATGTGCTTACGCCAACGCAACAATT
AGCACGACAT
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