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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2382 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-06_009620.1 |
| Cds size | 1395 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186175.3226192-UTR-P-wetherbeei_contig1953:892..1234 | 1683186175.3226192-UTR-P-wetherbeei_contig1953:892..1234 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1953 893..1234 + |
| 1683186175.3305209-UTR-P-wetherbeei_contig1953:1524..1626 | 1683186175.3305209-UTR-P-wetherbeei_contig1953:1524..1626 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1953 1525..1626 + |
| 1683186175.3999746-UTR-P-wetherbeei_contig1953:4430..4973 | 1683186175.3999746-UTR-P-wetherbeei_contig1953:4430..4973 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1953 4431..4973 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186175.3408053-CDS-P-wetherbeei_contig1953:1626..2233 | 1683186175.3408053-CDS-P-wetherbeei_contig1953:1626..2233 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1953 1627..2233 + |
| 1683186175.3504374-CDS-P-wetherbeei_contig1953:2510..2706 | 1683186175.3504374-CDS-P-wetherbeei_contig1953:2510..2706 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1953 2511..2706 + |
| 1683186175.3609362-CDS-P-wetherbeei_contig1953:2918..3157 | 1683186175.3609362-CDS-P-wetherbeei_contig1953:2918..3157 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1953 2919..3157 + |
| 1683186175.3690279-CDS-P-wetherbeei_contig1953:3524..3569 | 1683186175.3690279-CDS-P-wetherbeei_contig1953:3524..3569 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1953 3525..3569 + |
| 1683186175.377207-CDS-P-wetherbeei_contig1953:3751..3888 | 1683186175.377207-CDS-P-wetherbeei_contig1953:3751..3888 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1953 3752..3888 + |
| 1683186175.385003-CDS-P-wetherbeei_contig1953:4112..4193 | 1683186175.385003-CDS-P-wetherbeei_contig1953:4112..4193 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1953 4113..4193 + |
| 1683186175.392411-CDS-P-wetherbeei_contig1953:4340..4430 | 1683186175.392411-CDS-P-wetherbeei_contig1953:4340..4430 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1953 4341..4430 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1953.1.5 >prot_P-wetherbeei_contig1953.1.5 ID=prot_P-wetherbeei_contig1953.1.5|Name=mRNA_P-wetherbeei_contig1953.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=465bp
MGVAGDVLAQPELLRHALSFAGRQYLYVAGVSTVWRQAWLANAAAAANGP
SGGGGSFCTSHLCAITSVSCMEWAMDRDSGGGSSSRRRNCRSDSFGIVDK
GSNAAGGDGGNAANGSGVTMESGYDGNDGGSGGGGRYGGEGDGILVWDAK
LVEALAAAPDGTAVLKWGLDNGVLSPDHEPVGDRGGRLCDWAAGAGRLKT
LQWAREHNFTWVAWTAADAARKGHLEVLQWLKQNGCPWNATTCSYAGMDR
CLKLRSVFRASISSLLLRRRRPPGRASLGAGQRLPLGRQHNRKRRAPRPL
GGAQVGPRCRMRHGHVHVPKGGRRRTSRRAEVGARTGRSMGREDVRQAKR
GNLEMLQWCRANGCPWSEETCSKAASRGHLQVLQWCRDNGCPWDGMTCSW
AAWRGHLEVLQWARANGCPWDARTCRSAAGGGHAEVLEWVHNNGCPCRHN
VIQALQLQQIDVEV* back to topmRNA from alignment at P-wetherbeei_contig1953:893..4973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1953.1.5 ID=mRNA_P-wetherbeei_contig1953.1.5|Name=mRNA_P-wetherbeei_contig1953.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4081bp|location=Sequence derived from alignment at P-wetherbeei_contig1953:893..4973+ (Phaeothamnion wetherbeei SAG_119_79)
CGGGTGCGGAAACTTCCGAAAAAGCGCCGAAACGGCTGAAAAGGATCCTC
TTAGAAACAAGGGGAGCGCTACCAACAACGAGTGCTGGTTTTCAGTGTTA
ATGCGATGGTCTGACATGTTGGGCGTTTGATATTCTCTCCCTTCCGTTTC
ATCCAGTTGTGCCGAGGGCCCTCGAGTGCGAGCAATAACTTCCTCTCTCC
GTTTCTCCATTTCACGTCACTCACTTTCTCATTAAGGGAGCTGTTTCATT
CCGTCAGCGCGAGCTCCACCGGAGCCGGAACCAGGGGTTCTCTTACCACG
GTCTGAGATCAGAGGACGCGACGTCAGATCTTCATTCGGCAGGTGGGAAA
CGAAGAGCACGAAGCAGGATGGGCATGCAGTTAAGAGATAGGCCCTTCGA
GGTTATTTGAGGCGCCGCCAATTTTAATCTGAATCCGTTCTTAGCATCCA
TGCGCGACATACTTCCTTCCTTCGTCTTTATTATTAACTTTTGAGTTGGA
TCGGAGACAAAGCAGGGAGATCTTCGAAGCCCATGCACATTTAACAAGAG
CTACACGCATCAACACATAATGAAAGGTGGACATCTTCGCACCACATTCG
TACCTAATTTTTCCTCTGTCCTTGTGCAGCAGCTTCACCCCAAATCGCCA
TTTTCGGTCATGCTCTTTCAGAACCCCGAGCGGTTCACTGCCAGCGCCAC
ACGCCTTCGGTCGAAAACTTCATCCTGAAGACAAATGGGGGTCGCAGGCG
ACGTTCTCGCGCAGCCGGAGCTCCTGCGGCACGCGCTTTCCTTCGCAGGC
AGACAGTATCTCTACGTGGCCGGTGTTTCTACAGTGTGGCGGCAGGCATG
GCTGGCCAACGCCGCCGCCGCCGCCAACGGCCCCAGCGGCGGCGGTGGCA
GCTTTTGCACGTCGCATCTCTGCGCCATCACCTCGGTGTCCTGCATGGAG
TGGGCCATGGACCGCGACAGTGGCGGTGGGAGCAGCAGCCGCCGTAGAAA
CTGCCGGAGCGACAGCTTCGGCATCGTCGACAAGGGCAGCAATGCAGCCG
GGGGCGACGGCGGCAATGCCGCCAACGGCAGCGGTGTCACCATGGAGAGC
GGCTACGACGGCAACGACGGTGGCAGCGGTGGCGGCGGCAGATACGGCGG
CGAAGGCGACGGCATCCTCGTGTGGGACGCCAAGCTGGTCGAAGCGCTGG
CGGCGGCTCCCGACGGCACGGCGGTGCTGAAGTGGGGGCTCGACAACGGG
GTGCTCTCGCCCGACCACGAGCCGGTGGGTGACCGCGGTGGCCGCCTCTG
CGACTGGGCCGCCGGCGCCGGCCGGCTCAAGACGCTGCAGTGTGAGTTGT
CAATGGAAATTTCGGACTTTCCTCTGGAGAGAACAGCAGAGAAAACAGAG
GAGCGAAACGTTTCGCTGCTCGTCTTTCGGGCAGTCTGTCGCTCTTCCCC
TTGCCAGCACAATTGTCCCTTCCGCAATGTCGTCACGATGGCCTGCCATG
CCCAACCACCTACTGTACAGCCCTGTGCAATCTCACGCCCGCTTGCAACC
GAATCTCTGCGAAATTCCCACCCTGCGAAACAAACCCTGTTGCTTTTAAC
AAAACCCGCAAACAACAGGGGCGCGCGAACACAATTTTACGTGGGTCGCT
TGGACAGCGGCGGACGCTGCAAGAAAAGGACACCTCGAAGTCCTTCAATG
GCTGAAGCAAAACGGCTGCCCCTGGAACGCGACGACGTGCTCCTATGCGG
GTATGGACCGGTGCTTGAAGCTACGATCGGTTTTTCGTGCTTCGATCTCT
TCCCTTCTTCTCCGGTAGGAAGCGTTTTTTTGGGCTGCCGGGATTGGTTG
GCCGCAGCCGGCTTCTCTCTTCGGCGGAGTGGTTTGCACACAAAGAGCTA
CAATGCCGGCGTTTTGCGCGCTTGGGTGGTAGCGACACCGAACACGCCAC
TGGAGCCGTTCCACAGACTATTCAGGAAAGAACGAAACAGTCTGACTAAT
ACATTAGCCATTTGCTCTTTCCACAGCCGCCGGAGGCCACCTGGCCGTGC
TTCGCTGGGCGCGGGCCAACGGCTGCCCCTGGGACGCCAACACAACCGCA
AACGCCGCGCACCGCGGCCACTTGGGGGTGCTCAAGTGGGCCCACGCTGC
CGGATGCGTCATGGACATGTTCACGTGCCAAAAGGCGGCCGGCGGCGGAC
ATCTCGACGTGCTGAAGTGGGCGCGCGCACAGGGCGCTCCATGGGACGAG
AAGACGTGCGCCAAGGTGAGGATTTATAGACTGGCAAGCGCGGGTTTGGC
GGCGGCTTTCCACAACCCTTTCCATAGACCTTTGTTCGAGGCCTTTCCAA
GACCCGCGGCCCGCCTGCTTGCCCGCATGTAGGCCTCCTCACCTGGCTCT
TTGCTTGTCTCGGTCGCTGATCGTGCGGTGTCCGGAGTTCGGTTCTGCCC
TCTCTGGCACCGTCTCGCTCCACTCACAGGGGATTCTCATGTCTTTCTTT
CACCAACCCTTATCCTGTTGCGCTGCCGCCCTCCTGCCGTGCCGCGATCG
TGCCGGCGGGTCCAAACTGTCAATTCCGCTCGGTTGCCTTCCTGCACGCC
CCGTTTTGCAAACTACCGTGGCAAAAAGGCAGCAAAGCGAGGAAACCTCG
AGATGCTTCAGTGGTGCCGTGCGAACGGTGAATCTTCTTTTACTATAACT
AATGATGTTTCGTGCATCTTGATGAAAAGTCAAGCGAACCTGGTCTAGAG
GTAGCCAAGGCATGCTTCGAATGTGCGCTTCAGCTTTCAAATTTCTGCTT
GGAGCGATGATCTTGACCACTCGACCATCTTGCCATTTTTTTGGCTACCC
CCCAAAAAGGCTGCCCGTGGTCAGAAGAAACATGCTCCAAAGCCGCGTCG
AGAGGCCACCTACAGGTGCTGCAGTGGTGCCGAGACAACGGCTGCCCCTG
GGACGGCATGACGTGCAGCTGGGCGGCGTGGCGGGGCCACCTGGAAGTGA
GCGGGGAGGAAGGAACAAAGCAACCCGTGTGGCAAAGACGAATTCCTGTC
TTCCAAATTTAGGGTTGGCATCAGGGTTAGGATTTCTAAGTCATCGTCCG
TCTCTTGCGGGTCGAGGACAAATTTGAAGCTCCGACAACCAGGAAGCGGT
CGACTCTTCTAATTGCACGAGCGCTATCGCCGGTACCCGATCCAACTTCT
TATCCTTCTAAAACGAACAGGTGCTGCAGTGGGCGCGGGCCAATGGCTGC
CCGTGGGATGCCCGGACGTGTCGGAGCGCAGCAGGCGGCGGCCACGCCGA
GGTAAGCGCAACCGAAAGCACGTCTCTGCTTTCTTCCAGTATATTTACCG
TATAGATCGCAAACCGGAAGACTGGAAATTTTGCCTGTTTGCCGGGGAAG
CTCCACACCTTTAAACGATTTCTTTTCTTCCTTTTCTTTATCGGTCAGGT
GCTTGAGTGGGTGCACAACAACGGGTGCCCGTGCCGCCATAACGTCATCC
AGGCGCTCCAGCTGCAGCAGATCGATGTAGAGGTTTGAGAGTTTTCAAGA
GAGCCGGGAACCGAACGGAATTTAGGCAGCCATCGGTGATCTATAATATT
TGCATGATATTAATTCGGAGGTGGTGTAGAAACTGCTGTGAGCAGTGGCC
GCGGTGAATAAGTAGGACATACTGACGCGTCCTAGCCGCATCCTGATTTA
CTCTGTAGATTATTCTTCCTTTCGGCCTAGTGACACGACTGGCAAATTAC
TCGTTACATATTGGCGGAGCGATGCATACACTGCCTTTCCCGGCCGGATT
GCTGGTGCAAGCTTTCCCTCCTGCTAACCCATGGCAGCACCTGATCGCCC
CGGCAAGAAGGCGACGAGCGAAGAGCATGATATGAAACCGTATGAGTGAC
TCCGTACGATGCTGCCAAGCCTGGATATATGGTTTTTCGTTCTTGTTCCT
CGGTGCCGTTTTTCCCCTCCCCTCAAAAAAAGCAAGGCACGTCCACGGAC
AGCACCGCGCTTTATTGGTGGATTATTTAAGTCAATAGTTTTCTCGTTGT
TATTCCCTTCAGAGCCGATGAGACAAACGGT back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1953:893..4973+ >mRNA_P-wetherbeei_contig1953.1.5 ID=mRNA_P-wetherbeei_contig1953.1.5|Name=mRNA_P-wetherbeei_contig1953.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1395bp|location=Sequence derived from alignment at P-wetherbeei_contig1953:893..4973+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGGTCGCAGGCGACGTTCTCGCGCAGCCGGAGCTCCTGCGGCACGC
GCTTTCCTTCGCAGGCAGACAGTATCTCTACGTGGCCGGTGTTTCTACAG
TGTGGCGGCAGGCATGGCTGGCCAACGCCGCCGCCGCCGCCAACGGCCCC
AGCGGCGGCGGTGGCAGCTTTTGCACGTCGCATCTCTGCGCCATCACCTC
GGTGTCCTGCATGGAGTGGGCCATGGACCGCGACAGTGGCGGTGGGAGCA
GCAGCCGCCGTAGAAACTGCCGGAGCGACAGCTTCGGCATCGTCGACAAG
GGCAGCAATGCAGCCGGGGGCGACGGCGGCAATGCCGCCAACGGCAGCGG
TGTCACCATGGAGAGCGGCTACGACGGCAACGACGGTGGCAGCGGTGGCG
GCGGCAGATACGGCGGCGAAGGCGACGGCATCCTCGTGTGGGACGCCAAG
CTGGTCGAAGCGCTGGCGGCGGCTCCCGACGGCACGGCGGTGCTGAAGTG
GGGGCTCGACAACGGGGTGCTCTCGCCCGACCACGAGCCGGTGGGTGACC
GCGGTGGCCGCCTCTGCGACTGGGCCGCCGGCGCCGGCCGGCTCAAGACG
CTGCAGTGGGCGCGCGAACACAATTTTACGTGGGTCGCTTGGACAGCGGC
GGACGCTGCAAGAAAAGGACACCTCGAAGTCCTTCAATGGCTGAAGCAAA
ACGGCTGCCCCTGGAACGCGACGACGTGCTCCTATGCGGGTATGGACCGG
TGCTTGAAGCTACGATCGGTTTTTCGTGCTTCGATCTCTTCCCTTCTTCT
CCGCCGCCGGAGGCCACCTGGCCGTGCTTCGCTGGGCGCGGGCCAACGGC
TGCCCCTGGGACGCCAACACAACCGCAAACGCCGCGCACCGCGGCCACTT
GGGGGTGCTCAAGTGGGCCCACGCTGCCGGATGCGTCATGGACATGTTCA
CGTGCCAAAAGGCGGCCGGCGGCGGACATCTCGACGTGCTGAAGTGGGCG
CGCGCACAGGGCGCTCCATGGGACGAGAAGACGTGCGCCAAGCAAAGCGA
GGAAACCTCGAGATGCTTCAGTGGTGCCGTGCGAACGGCTGCCCGTGGTC
AGAAGAAACATGCTCCAAAGCCGCGTCGAGAGGCCACCTACAGGTGCTGC
AGTGGTGCCGAGACAACGGCTGCCCCTGGGACGGCATGACGTGCAGCTGG
GCGGCGTGGCGGGGCCACCTGGAAGTGCTGCAGTGGGCGCGGGCCAATGG
CTGCCCGTGGGATGCCCGGACGTGTCGGAGCGCAGCAGGCGGCGGCCACG
CCGAGGTGCTTGAGTGGGTGCACAACAACGGGTGCCCGTGCCGCCATAAC
GTCATCCAGGCGCTCCAGCTGCAGCAGATCGATGTAGAGGTTTGA back to top
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