mRNA_P-wetherbeei_contig19527.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19527.1.1
Unique NamemRNA_P-wetherbeei_contig19527.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: UPI00166F338D (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paenibacillus nasutitermitis TaxID=1652958 RepID=UPI00166F338D)

HSP 1 Score: 286 bits (731), Expect = 6.990e-93
Identity = 141/260 (54.23%), Postives = 173/260 (66.54%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGM 783
            +DAVI+ TPPW +P L + +LQAGK VLCEKP+ + L  A  V+  E A    VQVGF  RHGPL  TLRQWI E RLGSPL  R+ +FDE +DPEGN EHY RI  T+ HG+P IHDGAH  D LHFL     + + ++G  TR  FP  N +L++I + +G  ARVEIGWFLP FP GE+ +VGP GIA FD+ A+ V L+TD   E V LE+DW   CFR QL  F+  +R   P  PGT+EGIASLAL    E G+
Sbjct:   68 LDAVIICTPPWVTPHLTMESLQAGKHVLCEKPMAVDLVTAKKVQATELATGCKVQVGFTYRHGPLLETLRQWIREGRLGSPLVYRLGIFDEVWDPEGNKEHYDRIYRTMQHGSPSIHDGAHVADFLHFLTDSAVASVDAYGIRTRPEFPATNYDLSMIHYENGDIARVEIGWFLPHFPNGEFEVVGPKGIAIFDRFAQYVQLKTDKLTETVKLEEDWAASCFRIQLDKFIASIRMDTPCVPGTAEGIASLALTKQIEQGI 327          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: A0A1Y5K1X2_9BACL (GFO_IDH_MocA domain-containing protein n=5 Tax=Paenibacillus TaxID=44249 RepID=A0A1Y5K1X2_9BACL)

HSP 1 Score: 283 bits (723), Expect = 1.170e-91
Identity = 138/261 (52.87%), Postives = 176/261 (67.43%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGMS 786
            IDAV++ TPPW +P L I +LQAGK VLCEKP+ + L  A+ VRE EQ+    VQVGF  RHGPL  TLR WI   +LG+PL  R+ +FDE +DP+GNPEHY RI  T+  G+P IHDGAH  D+L+FL       + S+G  TR  FP  N +L+VI FA+G  A+VEIGWF+P FP GE+ +VGP GIA FD+ +R+V L+ +T  + V LEDD+F  CF+ QL  FV  ++T  P  PGT  GI SLAL  A E  +S
Sbjct:   68 IDAVVICTPPWITPLLTIESLQAGKHVLCEKPMAVDLETALKVREAEQSSGCQVQVGFTYRHGPLLETLRTWIRSGQLGAPLIYRMGIFDEIWDPDGNPEHYDRIYRTMERGSPSIHDGAHVADYLNFLSDSRVEEVQSFGLRTREEFPASNYDLSVIRFANGDVAKVEIGWFMPRFPKGEFEVVGPRGIAIFDRDSRTVQLKNETITQTVQLEDDYFESCFKIQLDKFVHSIKTGEPCIPGTQAGIDSLALTKAIEKSIS 328          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: A0A329MCC2_9BACL (Uncharacterized protein n=1 Tax=Paenibacillus contaminans TaxID=450362 RepID=A0A329MCC2_9BACL)

HSP 1 Score: 280 bits (715), Expect = 1.730e-90
Identity = 136/262 (51.91%), Postives = 172/262 (65.65%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGMSQ 789
            +DAV++ TPPW +P L + +LQAGK VLCEKP+ + +  A  VRE E+A    VQVGF  RHGPL  TLR+WI + +LGSPL  R+ +FDE++DP GNPEHY RI  T+ HG+P IHDGAH  D L FL     + + S+G  TR+ FP  N +L+VI F +G  A+VEIGWFLP FP GE+ IVGP GIA FD+  + V L+T    E V LE+DW   CF  QL  F+  +RT  P  PG  EGI SLAL  A E  + +
Sbjct:   68 LDAVVICTPPWVTPHLTMESLQAGKHVLCEKPMAVDVNTAEKVRETERATGYKVQVGFTYRHGPLLETLREWIKQGKLGSPLVYRLGIFDESWDPTGNPEHYDRIYRTMQHGSPSIHDGAHVADFLQFLAESPVTAVESFGIRTRTEFPTTNYDLSVIRFENGDIAKVEIGWFLPKFPKGEFEIVGPKGIAIFDRFDQYVQLKTGEITETVKLEEDWAASCFSIQLGKFIASIRTNTPCVPGVDEGIGSLALTKAIEKSLRE 329          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: UPI001F31676A (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paenibacillus sp. JJ-42 TaxID=2905648 RepID=UPI001F31676A)

HSP 1 Score: 280 bits (715), Expect = 2.540e-90
Identity = 136/260 (52.31%), Postives = 169/260 (65.00%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGM 783
            + AV+V TPPWA+P + I AL AGKDVLCEKP+  SL  A  + E E+     +QVGF  RHGPL   LR WI  DRLG PL +R+S FDE +DPEGN EHY RIL+TL HG PCIHDGAH  DHL FL      RI + G ++R  FP PN N A+IEFA+G +A++EIGWF P FP GE+ I+GP G+A+ D+A     L +D   E + L ++    CFR QL  F+  +  R  P PG+ EGI+SL L LAF   M
Sbjct:   69 VQAVLVCTPPWATPSITIEALHAGKDVLCEKPMATSLDAAEQMAEAERLSGRLLQVGFTYRHGPLMDGLRGWIESDRLGHPLQIRLSTFDEVWDPEGNQEHYERILNTLRHGPPCIHDGAHAADHLAFLTSSSPVRITARGLTSRPEFPSPNYNSALIEFANGDQAKLEIGWFFPGFPLGEFQILGPKGMAYLDRAKGEAVLISDRLTERIQLSENRVSSCFRAQLQKFLTSITFRQTPVPGSREGISSLRLTLAFAQAM 328          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: UPI000FD8D781 (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paenibacillus koleovorans TaxID=121608 RepID=UPI000FD8D781)

HSP 1 Score: 278 bits (712), Expect = 1.390e-89
Identity = 133/260 (51.15%), Postives = 173/260 (66.54%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGM 783
            IDAVIVATPPW +P +A+ AL+AGK VLCEKP+ + +  A  V+  E+     VQVGF  RHGPL  TLR WI + RLGSPL  R+ +FDE +DP GNPEHY RI  T+ HG+P +HDGAH  D L+FL   + + + S+G  TR  FP  N ++++I F +G  A+VEIGWFLP FP GE+ +VGP G+A FD+  + V+L T T  E V L++DW + CFR QL  F+  +R   P  PGT EGI SL+L    E G+
Sbjct:   98 IDAVIVATPPWVTPVVAMEALRAGKHVLCEKPMAVDVETARQVQATERETGKRVQVGFTYRHGPLLETLRAWIRDGRLGSPLVFRLGIFDEVWDPTGNPEHYERIFRTMGHGSPSVHDGAHVADFLNFLAESKVASVDSFGLQTRPEFPSSNYDISIIRFENGDVAKVEIGWFLPHFPKGEFEVVGPLGLAVFDRLEQYVSLRTGTVTETVRLDEDWALSCFRIQLTKFIASIRDDAPCVPGTEEGIQSLSLTKTIERGI 357          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: A0A0Q7IUS8_9BACL (Uncharacterized protein n=3 Tax=unclassified Paenibacillus TaxID=185978 RepID=A0A0Q7IUS8_9BACL)

HSP 1 Score: 277 bits (708), Expect = 2.900e-89
Identity = 132/261 (50.57%), Postives = 171/261 (65.52%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGMS 786
            +DAV+V TPPW +P + I AL AGKDVLCEKP+  S+A+A  +   E+   + +QVGF  RHGPL   L+ W+   RLG PL  R+ +FDE  DPEGNPEHY RIL+TL+HG PCIHDGAH  D+L +L G    R+V++G ++R  FP PN N A IEFA+G RA++EIGWF P  P GE+ I+GP G+A+ D+      +      E V L +D    CFR QL+ F + +R R  P PG+ EGIASL L LA  D M+
Sbjct:   69 VDAVLVCTPPWVTPGITIDALNAGKDVLCEKPMATSVAEAEKMAAAERQSGSLLQVGFTYRHGPLMEALQGWVARGRLGRPLQFRLGIFDELLDPEGNPEHYERILNTLHHGPPCIHDGAHAADYLAYLTGSSPVRVVAYGLTSRPEFPSPNYNAAHIEFANGDRAKLEIGWFYPHLPKGEFHILGPGGMAYLDRINNEAVIIEGKITERVQLSEDRARSCFRTQLSKFTDYIRMRRTPVPGSREGIASLRLTLAIADAMA 329          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: UPI000FD891EF (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paenibacillus koleovorans TaxID=121608 RepID=UPI000FD891EF)

HSP 1 Score: 275 bits (703), Expect = 2.000e-88
Identity = 135/260 (51.92%), Postives = 164/260 (63.08%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGM 783
            I+AV V TPPW +P + I AL AGK VLCEKP+  SL DA  V E E+     +QVGF  RHGPL   L++WI E RLG PL +RISV+DE +DP GNPE Y RI  TL HG PCIHDGAH+ DHL FL G    ++ + G  TR  FP PN N A+IEFA+G +A++E+ WFLP FPPGE+ I+GP+G A+ D+      L      E V L ++    CFR QL  FV  VR    P PG+ EGIASL L  A    M
Sbjct:   71 IEAVFVCTPPWVTPGITIDALSAGKHVLCEKPMATSLEDAERVAEAERVSGKLLQVGFTYRHGPLMDALQRWIAEGRLGRPLQIRISVYDEVWDPTGNPELYDRIFHTLRHGPPCIHDGAHSADHLAFLTGSTPVKVTAQGLKTRPEFPAPNYNTAIIEFANGDQAKLEVAWFLPHFPPGEFQIMGPSGTAYMDRVNNEAVLVQGKVTERVQLGENRVRSCFRTQLEKFVTSVRAGTTPVPGSREGIASLKLTQAIAHAM 330          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: UPI001AE5D4E5 (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paenibacillus eucommiae TaxID=1355755 RepID=UPI001AE5D4E5)

HSP 1 Score: 272 bits (695), Expect = 2.440e-87
Identity = 132/257 (51.36%), Postives = 166/257 (64.59%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFE 774
            +DA++VATPPW +P +A+  L+AGK VLCEKP+ + +A AM V+E E      VQVGF  RHG L  TLR WI E RLGSPL  R+ +FDE +DP GNPEHY RI  T+  G+P IHDGAH  D L FL      R+ S+G  TR  FP  N + ++IEF +G  A+VEIGWFLP FP GE+ ++GP GIA FD+  + V L TD   E V LE+DW + CFR Q   F+  +R   P  PG+ EGI+SL L    E
Sbjct:   71 LDAIVVATPPWHTPYIAMDCLRAGKHVLCEKPMAMDVATAMQVKETELETGYRVQVGFTYRHGLLLETLRSWIREGRLGSPLVYRLGIFDEVWDPAGNPEHYERIYRTMQRGSPSIHDGAHVADFLSFLSESPVQRVESFGLKTRHEFPSSNYDTSIIEFENGDMAKVEIGWFLPKFPKGEFEVIGPKGIAIFDRFEQYVQLRTDAITETVTLEEDWAMSCFREQFNKFIASIRLGQPFVPGSDEGISSLRLTKVIE 327          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: UPI001080B85B (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paenibacillus cymbidii TaxID=1639034 RepID=UPI001080B85B)

HSP 1 Score: 269 bits (688), Expect = 2.550e-86
Identity = 133/260 (51.15%), Postives = 164/260 (63.08%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGM 783
            +DA IVATPPW +P + I  L+AGK VLCEKP+ +    A  V   E+     VQVGF  RH PL   LR WI E RLGSP   RI +FDE +DP GNPEHYRRI  T+ +G P +HDGAH  D LH L      ++ ++G  +RS FP  N + ++I+FA+G RAR+EIGWF P FP GE+ IVGP GIA FD+  RSV L T  G E V  +DDW+  CFR QL  F+ G+R+  P  PGT EGI SL L    E  +
Sbjct:   69 VDAAIVATPPWVTPDITIDLLRAGKHVLCEKPMAILPEKAEEVARTERETGKKVQVGFTYRHDPLLEQLRDWIREGRLGSPRYFRIGIFDEVWDPVGNPEHYRRIFKTMEYGVPSVHDGAHIADFLHMLTDSPVKQVHAFGYKSRSEFPASNFDTSIIDFANGDRARLEIGWFYPQFPAGEFEIVGPEGIAVFDRLNRSVELRTTDGVERVNHDDDWWDTCFRIQLDKFIVGIRSEQPLVPGTREGIYSLTLTKQIESAI 328          
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Match: UPI001E5290DE (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Cohnella sp. NL03-T5 TaxID=2873699 RepID=UPI001E5290DE)

HSP 1 Score: 266 bits (681), Expect = 3.850e-85
Identity = 132/262 (50.38%), Postives = 167/262 (63.74%), Query Frame = 1
Query:    4 IDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQAGENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNPEHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFPRPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARSVTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIASLALCLAFEDGMSQ 789
            IDAVIVATPPW +P++ +  L+AGKDVLCEKP+ L L  A  V +VE+     VQ+GF  RH PL   LR WI  DRLGSPL  R+ ++DE +DP GNPEHY RI  T+ HG P IHDGAH  D L+ L     S + ++G  +R  FP  N + +VI FA+G  A++EI WF P FP GE+ ++GP G+A FD+  R V L T    E    E+DW+  CFR QL  FV G+R+  P  PGTSEGI SL+L  A E  M +
Sbjct:   68 IDAVIVATPPWVTPKITMDFLKAGKDVLCEKPMALDLETAKQVSQVEEETGRKVQIGFTYRHDPLLEKLRDWIRADRLGSPLVFRLGIYDEIWDPIGNPEHYDRIHKTMEHGIPSIHDGAHIADFLNMLTDSPVSHVEAFGLQSRPEFPTSNYDTSVIRFANGDMAKLEISWFYPVFPQGEFEVLGPKGLAVFDRFKRYVELRTRETTEREVHEEDWWESCFRIQLDRFVAGIRSEHPFVPGTSEGIYSLSLTKAIEISMER 329          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19527.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00166F338D6.990e-9354.23Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paeniba... [more]
A0A1Y5K1X2_9BACL1.170e-9152.87GFO_IDH_MocA domain-containing protein n=5 Tax=Pae... [more]
A0A329MCC2_9BACL1.730e-9051.91Uncharacterized protein n=1 Tax=Paenibacillus cont... [more]
UPI001F31676A2.540e-9052.31Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paeniba... [more]
UPI000FD8D7811.390e-8951.15Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paeniba... [more]
A0A0Q7IUS8_9BACL2.900e-8950.57Uncharacterized protein n=3 Tax=unclassified Paeni... [more]
UPI000FD891EF2.000e-8851.92Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paeniba... [more]
UPI001AE5D4E52.440e-8751.36Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paeniba... [more]
UPI001080B85B2.550e-8651.15Gfo/Idh/MocA family oxidoreductase n=1 Tax=Paeniba... [more]
UPI001E5290DE3.850e-8550.38Gfo/Idh/MocA family oxidoreductase n=1 Tax=Cohnell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19527contigP-wetherbeei_contig19527:2..790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1033743.CAES01000045_gene142
PFAMsGFO_IDH_MocA,GFO_IDH_MocA_C
Model size789
Max annot lvl91061|Bacilli
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.85e-74
EggNOG OGsCOG0673@1|root,COG0673@2|Bacteria,1TP83@1239|Firmicutes,4HC6I@91061|Bacilli,26V50@186822|Paenibacillaceae
DescriptionOxidoreductase family, NAD-binding Rossmann fold
Cds size789
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186175.2330897-CDS-P-wetherbeei_contig19527:1..7901683186175.2330897-CDS-P-wetherbeei_contig19527:1..790Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19527 2..790 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19527.1.1prot_P-wetherbeei_contig19527.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19527 2..790 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19527.1.1

>prot_P-wetherbeei_contig19527.1.1 ID=prot_P-wetherbeei_contig19527.1.1|Name=mRNA_P-wetherbeei_contig19527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
AIDAVIVATPPWASPRLAIRALQAGKDVLCEKPLGLSLADAMAVREVEQA
GENFVQVGFVLRHGPLFGTLRQWIIEDRLGSPLDLRISVFDETYDPEGNP
EHYRRILSTLNHGAPCIHDGAHTMDHLHFLLGEEASRIVSWGRSTRSAFP
RPNLNLAVIEFASGSRARVEIGWFLPTFPPGEWSIVGPTGIAWFDQAARS
VTLETDTGREMVALEDDWFVDCFRHQLATFVEGVRTRVPPAPGTSEGIAS
LALCLAFEDGMSQ
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mRNA from alignment at P-wetherbeei_contig19527:2..790+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19527.1.1 ID=mRNA_P-wetherbeei_contig19527.1.1|Name=mRNA_P-wetherbeei_contig19527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig19527:2..790+ (Phaeothamnion wetherbeei SAG_119_79)
GCGATCGATGCCGTGATCGTGGCAACGCCGCCGTGGGCGAGTCCCCGCCT GGCGATCCGGGCGTTGCAGGCCGGGAAGGACGTGCTCTGTGAGAAACCGC TCGGGTTGTCACTCGCCGACGCAATGGCAGTACGCGAGGTGGAGCAGGCG GGCGAGAACTTCGTGCAGGTCGGGTTCGTCCTGCGGCACGGTCCGCTCTT CGGGACGTTGCGGCAATGGATCATCGAGGACCGTCTGGGATCGCCGCTCG ATCTTCGGATCAGCGTCTTCGATGAAACCTACGATCCCGAGGGCAATCCG GAGCACTATCGACGCATCCTGTCCACGCTCAACCACGGCGCTCCCTGCAT TCATGATGGTGCCCACACGATGGACCACCTGCATTTCCTGCTCGGGGAGG AGGCAAGCCGGATCGTCAGCTGGGGGCGTTCGACGCGGTCGGCGTTTCCG CGGCCCAATCTCAACCTGGCCGTGATCGAGTTCGCATCCGGCAGCCGGGC GCGGGTGGAGATCGGCTGGTTCCTTCCCACGTTCCCGCCGGGCGAGTGGT CGATCGTGGGGCCGACGGGGATTGCGTGGTTCGACCAGGCGGCGCGATCG GTCACGCTGGAGACGGATACCGGTCGGGAGATGGTTGCCCTGGAGGACGA TTGGTTCGTCGATTGCTTCCGCCATCAGTTGGCGACATTCGTGGAAGGGG TGCGGACGCGGGTGCCACCCGCACCGGGCACCTCGGAGGGAATCGCCAGT CTCGCCCTTTGTCTTGCCTTTGAAGATGGCATGTCGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19527:2..790+

>mRNA_P-wetherbeei_contig19527.1.1 ID=mRNA_P-wetherbeei_contig19527.1.1|Name=mRNA_P-wetherbeei_contig19527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig19527:2..790+ (Phaeothamnion wetherbeei SAG_119_79)
GCGATCGATGCCGTGATCGTGGCAACGCCGCCGTGGGCGAGTCCCCGCCT
GGCGATCCGGGCGTTGCAGGCCGGGAAGGACGTGCTCTGTGAGAAACCGC
TCGGGTTGTCACTCGCCGACGCAATGGCAGTACGCGAGGTGGAGCAGGCG
GGCGAGAACTTCGTGCAGGTCGGGTTCGTCCTGCGGCACGGTCCGCTCTT
CGGGACGTTGCGGCAATGGATCATCGAGGACCGTCTGGGATCGCCGCTCG
ATCTTCGGATCAGCGTCTTCGATGAAACCTACGATCCCGAGGGCAATCCG
GAGCACTATCGACGCATCCTGTCCACGCTCAACCACGGCGCTCCCTGCAT
TCATGATGGTGCCCACACGATGGACCACCTGCATTTCCTGCTCGGGGAGG
AGGCAAGCCGGATCGTCAGCTGGGGGCGTTCGACGCGGTCGGCGTTTCCG
CGGCCCAATCTCAACCTGGCCGTGATCGAGTTCGCATCCGGCAGCCGGGC
GCGGGTGGAGATCGGCTGGTTCCTTCCCACGTTCCCGCCGGGCGAGTGGT
CGATCGTGGGGCCGACGGGGATTGCGTGGTTCGACCAGGCGGCGCGATCG
GTCACGCTGGAGACGGATACCGGTCGGGAGATGGTTGCCCTGGAGGACGA
TTGGTTCGTCGATTGCTTCCGCCATCAGTTGGCGACATTCGTGGAAGGGG
TGCGGACGCGGGTGCCACCCGCACCGGGCACCTCGGAGGGAATCGCCAGT
CTCGCCCTTTGTCTTGCCTTTGAAGATGGCATGTCGCAG
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