prot_P-wetherbeei_contig1951.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1951.1.1
Unique Nameprot_P-wetherbeei_contig1951.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length210
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1951.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 57..115
e-value: 2.5E-7
score: 32.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..209
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 45..104
score: 8.689387

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1951contigP-wetherbeei_contig1951:3107..3736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1951.1.1mRNA_P-wetherbeei_contig1951.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1951 3106..3848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1951.1.1 ID=prot_P-wetherbeei_contig1951.1.1|Name=mRNA_P-wetherbeei_contig1951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=210bp
MSRSVRFHVAHACPLRPIRCGAHGCGVTVAAGDADAHRHGPACPAHAELE
VLAARGAAQREPVVCDACGTALLRRDLLAHRREECIWRLMPCLECSLSLP
KLRMGDHRRFYCSTPHAVRLRLLPVAARSHQPYARPWAEAEEASSAAAAV
AAVAAVAQKTLAVRTVPTAKAPAAAAAAAAITADDRAPSFSADDANGVKT
VSEGSEPMQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF