mRNA_P-wetherbeei_contig19487.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19487.1.1
Unique NamemRNA_P-wetherbeei_contig19487.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A521YN27_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YN27_9PROT)

HSP 1 Score: 318 bits (814), Expect = 1.090e-104
Identity = 177/329 (53.80%), Postives = 223/329 (67.78%), Query Frame = 1
Query:    1 MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAG-AREPCGECDGCRWFAAGQHPDFRQVEPEALAA-PVEPSEDAPAPSKTTKPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPG--KRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRMP 975
            M+PW    ++SL +R   LP ALL+HG RG GKL LA   AQ +LCE      +PCG CDGCRWFAAG HPDFR++EPEALA  P+EP E  P  +K  KPS EIK++QVRELA FLN+GSHRG+ R+A+ HPAE MNANAAN+LLK LE+P +GA F+LVS+    L+PTIRSRC+++P+ IP    +L WL  Q V++AA WLA+AGGAPLLA++YA      R   L  LL++          AT+R+ +  L+E LQK ALD+AFS F G T  +  G P   KR +    AWL FARE GR+R  SRHPLNPKLF+  ++   P
Sbjct:    1 MHPWNQGIFDSLRSRTARLPHALLLHGARGTGKLALAEHIAQFLLCEAGDPGGKPCGACDGCRWFAAGSHPDFRRLEPEALAPEPIEPEEGEPG-AKRGKPSIEIKIEQVRELAAFLNVGSHRGRFRVALVHPAEDMNANAANALLKGLEEPPAGAVFLLVSHRPARLLPTIRSRCVALPVSIPPRETALQWLLGQGVKDAARWLAYAGGAPLLALDYAA-----RADVLDRLLKQPA-------PATDRDQVGTLAEALQKQALDRAFSAF-GLTPKYQTGVPATDKRHA---RAWLAFAREMGRHRLLSRHPLNPKLFSAQMLQERP 312          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A1F4F8E3_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F8E3_9PROT)

HSP 1 Score: 317 bits (813), Expect = 2.630e-104
Identity = 170/331 (51.36%), Postives = 224/331 (67.67%), Query Frame = 1
Query:    1 MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAG-AREPCGECDGCRWFAAGQHPDFRQVEPEALA--APVEPSEDAPAPSKTTKPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKG--GRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRMPG 978
            ++PW    ++SL  R   LP ALLIHG  GIGKL LA  FAQ +LCE    +  PCG CD CRWF AG HPD R++EPE++A  +  EP E A AP++  +PS EIKVD+VR LA FLN+ SHRG RR+A+ HPAE MNA+AAN+LLK LE+P   A F+LVS+    L+PTIRSRC++VP+ +P+ AA+L WL+ + V  A  WLA++GGAPL A+EYAG+        LA LLR    G AG+ D S  ER+ +E L+E LQK ALD+AF    G+ KY   G P    +GT  AWL +AR  GR+R  +RHP+NP+LF +++++ +P 
Sbjct:    5 LHPWNAGVFQSLAMRVPRLPHALLIHGVPGIGKLALAGRFAQSLLCEHPDRSSRPCGSCDACRWFLAGNHPDSRRLEPESIAMQSAPEPEEGAEAPARRARPSVEIKVDEVRGLADFLNLRSHRGGRRIALVHPAEDMNAHAANALLKGLEEPPPEAVFLLVSHRPARLLPTIRSRCVAVPVPVPERAAALRWLESRGVTQAERWLAYSGGAPLRALEYAGASEA-----LAALLRAALEGDAGVLD-SIRERDELETLAEALQKHALDRAFESLAGRRKYMTEGKPAA--AGTAVAWLEYARSLGRHRVLARHPVNPRLFVLEMLAGLPS 327          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A1F4FHQ5_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FHQ5_9PROT)

HSP 1 Score: 312 bits (800), Expect = 1.540e-102
Identity = 176/331 (53.17%), Postives = 223/331 (67.37%), Query Frame = 1
Query:    1 MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAG-AREPCGECDGCRWFAAGQHPDFRQVEPEALAA-PV-EPSEDAPAPSKTTKPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDA--WLRFAREAGRYRSASRHPLNPKLFAMDLVSRMPG 978
            M+PW    +ESL  R E LP ALL+HG RG GKL LA    + +LCE    AR+PCG C+GCRWFAAG HPDFR++EPEALAA P+ EP E  PA +K  KPS EIKV+QVRELA FLN+GSHRG+ R+A+ HPAE MNANAAN++LK LE+P +GA FILVS+    L+PTIRSRC+++P+ IP   A+L WL  Q  ++AA WLA+AGGAPL A++YA        A++ D L K           ++RE +E L+E LQK ALD+AF+ F    KY      G  P+   DA  WL FARE  R+R  +RHPLNPKLF+  +++  P 
Sbjct:    2 MHPWNEPVFESLRRRAERLPHALLLHGARGTGKLALAERVTRFLLCEAPDPARKPCGACEGCRWFAAGSHPDFRRLEPEALAAEPMGEPEEGEPA-AKRGKPSIEIKVEQVRELAAFLNVGSHRGRFRVALVHPAEDMNANAANAMLKGLEEPPAGAVFILVSHRPARLLPTIRSRCVALPVPIPPRDAALKWLSVQGAKDAARWLAYAGGAPLRALDYAAE------AEVLDRLLKQPAP------VSDREDLERLAEALQKQALDRAFAAFGLPPKYQT----GIPPAAEADARAWLAFAREMSRHRLLTRHPLNPKLFSAQMLAERPA 315          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A537D8C5_9PROT (DNA polymerase III subunit delta n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D8C5_9PROT)

HSP 1 Score: 308 bits (790), Expect = 5.730e-101
Identity = 167/329 (50.76%), Postives = 218/329 (66.26%), Query Frame = 1
Query:    1 MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETA-GAREPCGECDGCRWFAAGQHPDFRQVEPEALAAPVEPS---EDAPAPSKTTKPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRMP 975
            M+PW     ESL  R   LP ALLIHG +G+GK  LA   AQL+LCE    AR+PCG C+GCRW+A G HPDFR++EPE LA P + +   E+  AP++  KPS EIK+DQVRELA FLNIGSHRG  R+A+ HPAE MN NAAN+LLK+LE+P +GA F+LVS+    L+PTIRSRC+++P+ +P   A+L WL  Q + +A  WLA+AGGAPL A++YAG     + A +  +LR       A  +  +R+ +ELL+E LQK ALD+AF+      KY    G    P     AWL +AR+ G+ R   RHPLNPKLF+  L++ MP
Sbjct:    1 MHPWNEPLLESLRHRAGRLPHALLIHGAQGVGKRALAERIAQLLLCEARDAARKPCGACEGCRWYAGGNHPDFRRLEPEVLAPPPDAAAAEEEGEAPARRGKPSLEIKIDQVRELADFLNIGSHRGGLRVALVHPAEEMNINAANALLKALEEPPAGAVFLLVSHRPARLLPTIRSRCVALPVAVPPREAALRWLSGQGMPDAERWLAYAGGAPLRALDYAG-----KAALIERMLR-------APAAVEDRDELELLAEALQKSALDRAFAALGAAAKYRT--GVPSVPRARGVAWLAYARQLGKDRPLCRHPLNPKLFSAYLIAAMP 315          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A537AGC3_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AGC3_9PROT)

HSP 1 Score: 303 bits (775), Expect = 1.070e-98
Identity = 171/330 (51.82%), Postives = 217/330 (65.76%), Query Frame = 1
Query:    1 MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAG-AREPCGECDGCRWFAAGQHPDFRQVEPEALAAPVEPSEDAP----APSKTTK-PSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRM 972
            M+PW     ++L   RE LP ALL+HGPRGIGKL LA   AQL+LCE A  A+ PCG CDGCRW+  G HPDFR++EPEA+A    PSE+A     AP++ TK PS  I ++QVRELAGFLN+GSHRG  R+A+ HPAE +  NAAN+LLKSLE+P SGA FILVS+    L+PT+RSRC+++P+ IP   A+LAWL  Q V +A  WLAFAGGAPL A++YA        A    LL+         W   +R+++E L+E LQK A D+AFS F    KY      G R      AWL +AR+ G  R  +RHPLNPKLF+ ++V+ M
Sbjct:    1 MHPWNQPILDALKKTRERLPHALLLHGPRGIGKLALAERVAQLLLCEHAEPAQRPCGRCDGCRWYLGGNHPDFRRLEPEAIAKLPPPSEEAEEGSEAPARRTKQPSLYILIEQVRELAGFLNVGSHRGALRVALVHPAEDLYPNAANALLKSLEEPPSGAIFILVSHRPARLLPTVRSRCVAIPVPIPPRTAALAWLGAQGVADAERWLAFAGGAPLQALDYAAD-----AAAWERLLKS------PQW-VEDRDNLERLAEALQKMAYDRAFSAFGLAPKYRTGVPAGTRAKAR--AWLAYARKMGENRLLTRHPLNPKLFSAEMVAGM 316          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A0S8B568_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B568_9PROT)

HSP 1 Score: 298 bits (764), Expect = 7.530e-97
Identity = 158/331 (47.73%), Postives = 218/331 (65.86%), Query Frame = 1
Query:    1 MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCET-AGAREPCGECDGCRWFAAGQHPDFRQVEPEALAAPV----EPSEDAPAPSKTTKPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAA--DWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRM 972
            M+ W    WE++  R + LP A+LI GP G+GKL LA   A  +LCE+     +PCG C+GCRW A+G HPD R+VEP+AL+  V    EP  +A   ++  KPS EI+VDQ+R+L+ FL +GSHRG+RR+A+ HPAE+MN NAAN+LLK LE+P +GA F+LVS++   L+PTIRSRC+ VP+  P+ AA+LAWL+    E      WLAFAGG+P LA EYA  ERG R+    D + +G    L +  AT+RE +E L+EVLQK A+D+      G++ Y   G   K    TP AW R AR  G  R+ +RHP+NP+LF+ ++++ +
Sbjct:    1 MFKWNKEIWEAVRDRVDRLPHAVLIQGPEGVGKLALAEKLASRLLCESPTEISDPCGHCEGCRWVASGSHPDLRRVEPDALSDAVASAEEPEREARG-ARRAKPSLEIRVDQIRQLSDFLYLGSHRGRRRVAIVHPAESMNVNAANALLKGLEEPPAGAMFLLVSHHPARLLPTIRSRCVVVPVARPEEAAALAWLESVGGETRQMRRWLAFAGGSPRLAHEYASGERGVRMTPYLDAVIQGRPEDLPE--ATDRESLESLAEVLQKHAIDRVAFALAGRSVYGTVGKDAKASRATPLAWARLARYLGTARALARHPVNPRLFSAEMIAEI 328          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A1F3YCD8_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YCD8_9PROT)

HSP 1 Score: 297 bits (760), Expect = 2.190e-96
Identity = 161/322 (50.00%), Postives = 203/322 (63.04%), Query Frame = 1
Query:   25 WESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAGAR-EPCGECDGCRWFAAGQHPDFRQVEPEALA----APVEPSEDAPAPSKTTKPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRMP 975
            W  L A+ + LP ALL+HG  G+GKL LA  FAQL+LCE  G    PCG C GCRWF  G HPD R +EPEA+A     P E  ED P   +  +PS +IK++Q R L  F+N+GSHRG RR+A+ HPAE MN   ANSLLKSLE+P  GA F+LVS+    L+PTIRSRC+ V        A+ AWL  Q V     WLAFAGGAPL A+E+A  ERG+ I ++   +  G RA L +     R+ +E L+EVLQK ALD+AF+   G++KY      G   +G   AWL +AR  GR R  + HPLNPKLFA ++V+ MP
Sbjct:   10 WAQLTAKLDRLPHALLLHGASGVGKLALAERFAQLLLCEKRGQGISPCGACQGCRWFLGGNHPDVRFIEPEAIARNLPGPEEGEEDKP---RDARPSLQIKIEQTRALGSFVNVGSHRGGRRVAIVHPAEDMNTATANSLLKSLEEPPPGAVFLLVSHRPARLLPTIRSRCVPVXXXXXXXRAAAAWLAAQGVRAPERWLAFAGGAPLRALEHATGERGQAIERVLRAIASGDRAALGEVKG--RDDLEPLAEVLQKMALDRAFAALSGRSKYG-----GSAVAGDARAWLAYARAMGRNRVLTSHPLNPKLFAAEMVAGMP 321          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A1F4E257_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4E257_9PROT)

HSP 1 Score: 295 bits (754), Expect = 2.450e-95
Identity = 164/327 (50.15%), Postives = 213/327 (65.14%), Query Frame = 1
Query:   22 SWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAG-AREPCGECDGCRWFAAGQHPDFRQVEPEALA--APVEPSEDAPAPSKTT-KPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPD----AWLRFAREAGRYRSASRHPLNPKLFAMDLVSRMPG 978
            ++  L A  + LP ALL+HGPRGIGKL+LA  FAQL+LCE  G A  PCG CD CRW AAG HPD R +EPEA+A  A +E  E     +KT  KPS EI+++QVR+L  F+++GSHRG RR+A+ HPAE MNA  AN+LLK+LE+P + A F+LV++    L+PTIRSRC+ + + +PD + S  WL+ Q V +AADWLAFAGGAPL A++YA S  G RIA     L  G    +      +R+ +ELL + LQK ALD A +G     KY    G     S T       WL  AR+ GR+R+ +RHPLNPKLFA +L+  +PG
Sbjct:   12 AYRKLAAWLDRLPHALLLHGPRGIGKLQLAERFAQLLLCEGRGLATAPCGGCDSCRWIAAGNHPDLRILEPEAIARKAMLEDDEPTDTAAKTKRKPSIEIRIEQVRQLDDFVHMGSHRGGRRVAILHPAEDMNAPTANALLKNLEEPPANAAFLLVAHRPARLLPTIRSRCVQLAVPLPDASTSARWLEAQGVSDAADWLAFAGGAPLRALQYASSGNGARIAAWRTALGGGDALEVGG----DRDEMELLVDFLQKHALDAALAGVGAPPKY----GAAVADSATGPFELRQWLDCARDLGRHRALARHPLNPKLFATELLGMLPG 330          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A1F4B5I1_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B5I1_9PROT)

HSP 1 Score: 293 bits (749), Expect = 1.350e-94
Identity = 159/326 (48.77%), Postives = 216/326 (66.26%), Query Frame = 1
Query:   22 SWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAGAR-EPCGECDGCRWFAAGQHPDFRQVEPEALA---APVEPSEDAPAPSKTT-KPSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPP--GGPGKRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRMPG 978
            ++  L+A  E LP A+L+HGPRG+GKL+LA  FA+ +LCE+     +PCG C+ C WF AG HPDFR VEPE++A   A  E +E+      T  KPS EI+++Q+REL  F+++GSHRG RR+A+ HPAE MN   AN+LLK+LE+P     F+LVS+    L+PTIRSRC+ VP+ +P  A +  WL+ Q V++AA WLAFAGGAPLLA+++A SE GE++A     + +     +   S  +RE +E L ++LQK ALD+A  GF   +KY      GPG +    P  WLR+ARE GR R  +RHPLNP+LFA DL+   PG
Sbjct:    6 AYARLVAWAERLPHAILLHGPRGVGKLQLAEHFARRMLCESRSTDIQPCGRCNCCNWFLAGNHPDFRLVEPESMARTSASEEGAEEEGGSGGTKRKPSIEIRIEQIRELNDFVHMGSHRGGRRIALIHPAEDMNVPTANALLKNLEEPPPQVVFVLVSHRPARLLPTIRSRCVQVPVAVPGRARASRWLESQGVKDAASWLAFAGGAPLLAIQFAQSELGEKLAAWLRAVERNTPDAIEPGS--DREALEPLVDLLQKHALDRALLGFGQASKYGGRLMTGPGPKTHPMPIEWLRYARELGRRRLLARHPLNPRLFAADLLGTYPG 329          
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Match: A0A536WSJ4_9PROT (DNA polymerase III subunit delta n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WSJ4_9PROT)

HSP 1 Score: 285 bits (730), Expect = 7.060e-92
Identity = 168/332 (50.60%), Postives = 209/332 (62.95%), Query Frame = 1
Query:    1 MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAG-AREPCGECDGCRWFAAGQHPDFRQVEPEALA-APVEPS---EDAPAPSKTTK-PSQEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNA-NAANSLLKSLEDPASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAADWLAFAGGAPLLAMEYAG-SERGERIAQLADLLRKGGRAGLADWSATEREHIELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDAWLRFAREAGRYRSASRHPLNPKLFAMDLVSRM 972
            M+PW    +ESL   RE LP ALLIHGPRG+GKL LA   AQL+LCE A  A  PCG CDGCRW+  G HPDFR++EPEA+A +P E     E + AP++ TK PS  I VDQVR LA FLN+ SHRG  R+A+ HPAE +   NAAN+LLKSLE+P  GA FILVS+    L+PT+RSRC++VP+ IP    +L WL  Q V+ A  WLAFAGGAPL A+ YA  S   ER+ +             +     +RE +E L+E LQK A D+AFS F    KY     P         AWL +ARE G  R  +RHPLNP+LF+ DL+ ++
Sbjct:    1 MHPWNEPIFESLKRGRERLPHALLIHGPRGVGKLALAERLAQLLLCEHADPAARPCGICDGCRWYLGGNHPDFRRLEPEAIAKSPPEAEAEEEGSEAPARRTKQPSLFITVDQVRALASFLNLRSHRGALRVALLHPAEDLYLPNAANALLKSLEEPPVGAIFILVSHRPARLLPTVRSRCVAVPVPIPPQDVALRWLAGQGVQGAERWLAFAGGAPLQALAYAAESLNWERVLK-------------SPQPVDDRESLERLAEALQKIAYDRAFSAFGLPPKYQTGAAPATAAKAR--AWLAYAREMGENRVLTRHPLNPRLFSADLLGKI 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19487.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521YN27_9PROT1.090e-10453.80DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]
A0A1F4F8E3_9PROT2.630e-10451.36DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]
A0A1F4FHQ5_9PROT1.540e-10253.17DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]
A0A537D8C5_9PROT5.730e-10150.76DNA polymerase III subunit delta n=4 Tax=Betaprote... [more]
A0A537AGC3_9PROT1.070e-9851.82DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]
A0A0S8B568_9PROT7.530e-9747.73Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F3YCD8_9PROT2.190e-9650.00DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]
A0A1F4E257_9PROT2.450e-9550.15DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]
A0A1F4B5I1_9PROT1.350e-9448.77DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]
A0A536WSJ4_9PROT7.060e-9250.60DNA polymerase III subunit delta n=1 Tax=Betaprote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19487contigP-wetherbeei_contig19487:164..1144 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1071679.BG57_06820
Preferred nameholB
PFAMsDNA_pol3_delta2,DNApol3-delta_C
Model size981
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC02795
KEGG koko:K02341
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ModuleM00260
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.72e-72
EggNOG OGsCOG0470@1|root,COG0470@2|Bacteria,1MY1W@1224|Proteobacteria,2VNED@28216|Betaproteobacteria,1K0JG@119060|Burkholderiaceae
EC2.7.7.7
Descriptiondna polymerase iii
Cds size981
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186173.923722-CDS-P-wetherbeei_contig19487:163..11441683186173.923722-CDS-P-wetherbeei_contig19487:163..1144Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19487 164..1144 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19487.1.1prot_P-wetherbeei_contig19487.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19487 164..1144 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19487.1.1

>prot_P-wetherbeei_contig19487.1.1 ID=prot_P-wetherbeei_contig19487.1.1|Name=mRNA_P-wetherbeei_contig19487.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=327bp
MYPWATASWESLLARRENLPQALLIHGPRGIGKLELARTFAQLVLCETAG
AREPCGECDGCRWFAAGQHPDFRQVEPEALAAPVEPSEDAPAPSKTTKPS
QEIKVDQVRELAGFLNIGSHRGKRRLAVFHPAEAMNANAANSLLKSLEDP
ASGACFILVSNNARHLIPTIRSRCISVPMGIPDTAASLAWLKQQAVENAA
DWLAFAGGAPLLAMEYAGSERGERIAQLADLLRKGGRAGLADWSATEREH
IELLSEVLQKWALDQAFSGFCGKTKYFPPGGPGKRPSGTPDAWLRFAREA
GRYRSASRHPLNPKLFAMDLVSRMPG*
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mRNA from alignment at P-wetherbeei_contig19487:164..1144-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19487.1.1 ID=mRNA_P-wetherbeei_contig19487.1.1|Name=mRNA_P-wetherbeei_contig19487.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig19487:164..1144- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACCCCTGGGCCACCGCATCGTGGGAAAGCCTGCTGGCGCGCCGGGA AAACCTGCCGCAGGCTCTGCTGATCCACGGCCCCCGCGGAATCGGCAAAC TCGAGCTCGCCCGCACGTTCGCCCAGCTGGTCCTGTGCGAGACCGCCGGC GCCCGCGAGCCCTGCGGCGAGTGCGACGGGTGCCGCTGGTTCGCGGCCGG CCAGCACCCGGATTTCCGGCAGGTCGAGCCGGAAGCCCTGGCTGCGCCTG TCGAGCCTTCCGAGGATGCCCCGGCCCCGTCCAAGACGACCAAGCCCAGC CAGGAGATCAAGGTCGACCAGGTCCGGGAGCTGGCGGGTTTCCTGAACAT CGGATCGCACCGCGGAAAACGCCGCCTGGCGGTGTTCCACCCGGCCGAAG CGATGAATGCAAACGCCGCGAACTCACTTCTCAAGTCACTGGAGGATCCG GCTTCAGGGGCTTGTTTTATTTTGGTTTCAAATAACGCACGCCACCTGAT TCCGACCATCCGAAGTCGTTGCATCAGTGTTCCCATGGGGATCCCCGATA CCGCAGCCAGCCTGGCCTGGCTGAAGCAGCAGGCGGTCGAAAATGCCGCC GACTGGCTGGCCTTTGCCGGTGGCGCACCTCTGCTGGCAATGGAATACGC CGGCTCGGAGCGGGGCGAGCGCATAGCGCAACTGGCGGATCTGCTGAGGA AGGGCGGACGGGCGGGGCTGGCGGATTGGTCGGCGACAGAGCGTGAGCAT ATCGAGCTCCTGTCGGAAGTCCTGCAGAAATGGGCGCTGGATCAGGCGTT TAGCGGCTTTTGCGGGAAGACGAAGTATTTCCCGCCGGGCGGCCCGGGGA AACGCCCGTCCGGGACACCCGATGCATGGCTTCGATTTGCCCGTGAGGCC GGTCGATATCGCAGCGCGTCACGCCATCCGTTGAACCCCAAACTCTTCGC CATGGATCTGGTCTCGAGGATGCCTGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19487:164..1144-

>mRNA_P-wetherbeei_contig19487.1.1 ID=mRNA_P-wetherbeei_contig19487.1.1|Name=mRNA_P-wetherbeei_contig19487.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig19487:164..1144- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACCCCTGGGCCACCGCATCGTGGGAAAGCCTGCTGGCGCGCCGGGA
AAACCTGCCGCAGGCTCTGCTGATCCACGGCCCCCGCGGAATCGGCAAAC
TCGAGCTCGCCCGCACGTTCGCCCAGCTGGTCCTGTGCGAGACCGCCGGC
GCCCGCGAGCCCTGCGGCGAGTGCGACGGGTGCCGCTGGTTCGCGGCCGG
CCAGCACCCGGATTTCCGGCAGGTCGAGCCGGAAGCCCTGGCTGCGCCTG
TCGAGCCTTCCGAGGATGCCCCGGCCCCGTCCAAGACGACCAAGCCCAGC
CAGGAGATCAAGGTCGACCAGGTCCGGGAGCTGGCGGGTTTCCTGAACAT
CGGATCGCACCGCGGAAAACGCCGCCTGGCGGTGTTCCACCCGGCCGAAG
CGATGAATGCAAACGCCGCGAACTCACTTCTCAAGTCACTGGAGGATCCG
GCTTCAGGGGCTTGTTTTATTTTGGTTTCAAATAACGCACGCCACCTGAT
TCCGACCATCCGAAGTCGTTGCATCAGTGTTCCCATGGGGATCCCCGATA
CCGCAGCCAGCCTGGCCTGGCTGAAGCAGCAGGCGGTCGAAAATGCCGCC
GACTGGCTGGCCTTTGCCGGTGGCGCACCTCTGCTGGCAATGGAATACGC
CGGCTCGGAGCGGGGCGAGCGCATAGCGCAACTGGCGGATCTGCTGAGGA
AGGGCGGACGGGCGGGGCTGGCGGATTGGTCGGCGACAGAGCGTGAGCAT
ATCGAGCTCCTGTCGGAAGTCCTGCAGAAATGGGCGCTGGATCAGGCGTT
TAGCGGCTTTTGCGGGAAGACGAAGTATTTCCCGCCGGGCGGCCCGGGGA
AACGCCCGTCCGGGACACCCGATGCATGGCTTCGATTTGCCCGTGAGGCC
GGTCGATATCGCAGCGCGTCACGCCATCCGTTGAACCCCAAACTCTTCGC
CATGGATCTGGTCTCGAGGATGCCTGGCTGA
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