mRNA_P-wetherbeei_contig19467.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: A0A5C7NV63_9PROT (ABC transporter permease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NV63_9PROT) HSP 1 Score: 397 bits (1020), Expect = 4.390e-137 Identity = 210/259 (81.08%), Postives = 235/259 (90.73%), Query Frame = 1
Query: 10 LQALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
+ LLT++FLTSL+FGAVTAG+PLLLAGLGEQISEKAGVLNIGIEGMMLFGAY GFVAAYY+GSF LG+L GG+GGMVVAA+VALLCIR GLNQIVIGI +TIGFEGLTALLH+VQFS+TYPRL P +PGLS IP++G+ALF H+ +VYLAVLL L WLFR++++GLNLE+AG KPAALDAAGVSV TRSAAVLATGFLAG+GGAYMANVGAGLFVPFMT GAGFIGIVLAMLARGRP+WVLLGAALFGISL
Sbjct: 1 MDVLLTQSFLTSLIFGAVTAGIPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYCGFVAAYYTGSFWLGYLFGGLGGMVVAALVALLCIRLGLNQIVIGIALTIGFEGLTALLHYVQFSRTYPRLSPVPTLAIPGLSDIPVLGQALFNHNALVYLAVLLTFFLAWLFRNSFIGLNLESAGNKPAALDAAGVSVLATRSAAVLATGFLAGIGGAYMANVGAGLFVPFMTNGAGFIGIVLAMLARGRPVWVLLGAALFGISL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: A0A5J6N2J0_9PROT (ABC transporter permease n=2 Tax=Hypericibacter TaxID=2705399 RepID=A0A5J6N2J0_9PROT) HSP 1 Score: 369 bits (946), Expect = 7.870e-126 Identity = 191/259 (73.75%), Postives = 227/259 (87.64%), Query Frame = 1
Query: 10 LQALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
+ +L TE FLT+LLFGA+TAGVPLL GLGEQISEKAGVLNIGIEGMMLFGAY GFVAA+Y+GSFALGF++GG+GGM VA ++ALLC+R G+NQIVIGIG+T+G EGLTALLH QF+++YPRL++APV E+PG+S+IP++G ALF H+ IVYL V +GWL++ + +GLNLEAAG+KP ALDAAGVSV TR AVLATGFLAG+GGAY+ANVGAGLFVPFMT GAGFIGIVLAMLARG+P WVLLGA +FGISL
Sbjct: 1 MHSLFTEPFLTALLFGAITAGVPLLFVGLGEQISEKAGVLNIGIEGMMLFGAYAGFVAAFYTGSFALGFVVGGLGGMAVAGLMALLCVRLGMNQIVIGIGLTLGAEGLTALLHHFQFARSYPRLEKAPVLEIPGISEIPVLGPALFHHNLIVYLIVAATFAIGWLYKHSDIGLNLEAAGSKPGALDAAGVSVVATRVGAVLATGFLAGMGGAYLANVGAGLFVPFMTNGAGFIGIVLAMLARGKPYWVLLGALIFGISL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: UPI00141F4C98 (ABC transporter permease n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00141F4C98) HSP 1 Score: 368 bits (945), Expect = 1.120e-125 Identity = 192/257 (74.71%), Postives = 221/257 (85.99%), Query Frame = 1
Query: 16 ALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
ALLTEAF+TSL+FGA+TAGVPLLLAGLGEQISEK+GVLNIGIEGMML GAY GF AAYYSGSF GFL GG+GG VA ++A+ C+R G+NQIVIGI +T+G EGLTALLHF QFS+TYPRL ++ +P LS IP++G ALF H P+VYLAV ++ LGW+FRST++G NLEAAG KP+ALDAAGVSV TR AVL+TGFLAG+GGAYMANVGAGLF+PFMTGGAGFIGIVLAMLARGRP+WVL GA LFG SL
Sbjct: 3 ALLTEAFITSLVFGAITAGVPLLLAGLGEQISEKSGVLNIGIEGMMLMGAYCGFAAAYYSGSFWAGFLFGGLGGAAVAVLMAVFCVRFGMNQIVIGIALTLGVEGLTALLHFFQFSRTYPRLGESGALRIPLLSDIPVLGSALFAHHPLVYLAVAVVFALGWVFRSTFIGFNLEAAGNKPSALDAAGVSVIATRVYAVLSTGFLAGIGGAYMANVGAGLFIPFMTGGAGFIGIVLAMLARGRPLWVLFGALLFGASL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: A0A4R6WQ33_9PROT (Nucleoside ABC transporter membrane protein n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WQ33_9PROT) HSP 1 Score: 356 bits (913), Expect = 8.160e-121 Identity = 189/259 (72.97%), Postives = 214/259 (82.63%), Query Frame = 1
Query: 10 LQALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
+ ALL + FLT+L+FGA+TAG+PLLLAGLGEQISEKAGVLNIGIEGMMLFGAY GFVAAYYSGSF +G LLCIR GLNQIVIGI VT+GFEGLTA+LH QFS+TYPRL APV ++PGL+ IP++G LF H+ +VYLAV L+AVL W FR TY GLNLEAAG KPAALDAAG+ V +TR+ AVL TG LAG+GGAYMANVGAG+FVPFMTGGAGFIGIVLAMLARGRP+WVLLGA LFG+SL
Sbjct: 1 MNALLAQPFLTALVFGAITAGIPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYAGFVAAYYSGSFLVGXXXXXXXXXXXXXXXMLLCIRFGLNQIVIGIAVTLGFEGLTAILHHFQFSRTYPRLAAAPVVDIPGLAAIPVIGPGLFSHNAMVYLAVALVAVLAWAFRHTYFGLNLEAAGNKPAALDAAGIDVMKTRTIAVLCTGLLAGVGGAYMANVGAGIFVPFMTGGAGFIGIVLAMLARGRPLWVLLGALLFGVSL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: A0A2S6R4V5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R4V5_9PROT) HSP 1 Score: 345 bits (885), Expect = 1.470e-116 Identity = 181/256 (70.70%), Postives = 212/256 (82.81%), Query Frame = 1
Query: 19 LLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
L TE F+ SLLFGAVT G+PLLLAGLGEQISEK+GVLNIGIEGMML GAY GFVAAYY+GSF LGFL GG+ GMVVA+++ L C+ +NQIVIGI +TIG EGLTALLH QFS++YPRL +AP ++PGL+ IP++G A F P+VYL++LL+ + WLFR T++GLNL+AAG PAALDAAGV V TR+ AVL TG LAG+GGA+MANVGAG+FVPFM GAGFIGIVLAMLARG P WVLLGAALFG SL
Sbjct: 4 LFTETFVASLLFGAVTVGIPLLLAGLGEQISEKSGVLNIGIEGMMLIGAYGGFVAAYYTGSFWLGFLAGGISGMVVASLMVLFCVILSMNQIVIGIALTIGAEGLTALLHHFQFSRSYPRLSEAPSLDIPGLNDIPVIGPAFFERHPLVYLSILLVVFVAWLFRRTHIGLNLQAAGDNPAALDAAGVDVKLTRAGAVLTTGMLAGIGGAFMANVGAGIFVPFMIHGAGFIGIVLAMLARGNPYWVLLGAALFGASL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: A0A2E8QYS8_9PROT (ABC transporter permease n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E8QYS8_9PROT) HSP 1 Score: 344 bits (883), Expect = 2.950e-116 Identity = 183/256 (71.48%), Postives = 211/256 (82.42%), Query Frame = 1
Query: 19 LLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
L TEAF+ SLLFGAVT G+PLLLAGLGEQISEK+GVLNIGIEGMML GAY GFVAAYY+ SF LGFL GGV GM VA+++ L C+ +NQIVIGI +TIG EGLTALLH QFS+TYPR+ + P ++PGL IP++G A F P+VYL++ L+ V+ W+FR T +GLNL+AAG KPAALDAAGV V TR+ AVL+TGFLAG+GGAYMANVGAGLFVP MT GAGFIGIVLAMLARG P WVLLGAALFG SL
Sbjct: 4 LATEAFIASLLFGAVTVGIPLLLAGLGEQISEKSGVLNIGIEGMMLMGAYGGFVAAYYTESFWLGFLAGGVLGMAVASLMVLFCVLLSMNQIVIGIALTIGAEGLTALLHHFQFSRTYPRMPEVPTLDIPGLQDIPVIGPAFFERHPLVYLSIALVFVMAWMFRRTQIGLNLQAAGDKPAALDAAGVDVKLTRACAVLSTGFLAGIGGAYMANVGAGLFVPHMTHGAGFIGIVLAMLARGXPAWVLLGAALFGASL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: UPI001661249E (ABC transporter permease n=1 Tax=Pseudaminobacter soli TaxID=2831468 RepID=UPI001661249E) HSP 1 Score: 342 bits (878), Expect = 1.700e-115 Identity = 182/256 (71.09%), Postives = 216/256 (84.38%), Query Frame = 1
Query: 19 LLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
L +E FL +LLFGA+TA VPLLLAGLGEQISEKAGVLNIGIEGMM+FGAYTGFV AYYSGS GFL G +GG VVA+I+ LLC+R GLNQIVIGIG+T+GF+GLTALLH QFS+TYPRL A + +P LS IP++G A F H +VYLAVLL+ V+ +++R T +GLNL+AAG KPAALD AGV V RTR+ AVL+TG LAGLGGAY+A+VGAG+FVPF+T GAGF+GIVLAMLARGRP+WVLLGA +FG+ L
Sbjct: 4 LFSELFLGALLFGAMTAAVPLLLAGLGEQISEKAGVLNIGIEGMMIFGAYTGFVGAYYSGSLWFGFLTGALGGAVVASIMVLLCVRIGLNQIVIGIGLTLGFDGLTALLHHFQFSRTYPRLAAAEITAIPLLSDIPVIGPAFFRHHLLVYLAVLLVGVMVYVYRRTQLGLNLQAAGDKPAALDVAGVDVVRTRTVAVLSTGVLAGLGGAYLADVGAGIFVPFITNGAGFLGIVLAMLARGRPLWVLLGALVFGLCL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: UPI0018EA155D (ABC transporter permease n=1 Tax=Acuticoccus mangrovi TaxID=2796142 RepID=UPI0018EA155D) HSP 1 Score: 341 bits (875), Expect = 4.850e-115 Identity = 185/259 (71.43%), Postives = 217/259 (83.78%), Query Frame = 1
Query: 10 LQALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
++ LLT AFLTSLL GAVTAGVPLLLAGLGEQ+SEKAGVLNIGIEGMML GAYTGFVAA+ +GSF LGF G GGM VA ++ALLC+R GLNQIV+GI +T+G EG+TALLH VQFS+TYPRL +P LS+IP++G+ALF P VYLAVL++ +L ++FR T +GL+L+AAG KPAALDAAGVSV TR+AAVL TG +AG+GG YMAN+GAGLF+PFMTGGAGFIGIVLAMLARGRP WVL GA LFG S+
Sbjct: 1 MEQLLTVAFLTSLLAGAVTAGVPLLLAGLGEQVSEKAGVLNIGIEGMMLVGAYTGFVAAWSTGSFWLGFAAGAAGGMAVALLMALLCVRLGLNQIVVGIALTLGAEGITALLHHVQFSRTYPRLPGVETLPIPFLSEIPVLGRALFDRHPFVYLAVLMVPLLVFVFRRTGLGLHLQAAGDKPAALDAAGVSVVTTRTAAVLFTGAMAGMGGTYMANIGAGLFIPFMTGGAGFIGIVLAMLARGRPGWVLFGALLFGASM 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: A0A211ZHX6_9PROT (ABC transporter permease n=3 Tax=Bacteria TaxID=2 RepID=A0A211ZHX6_9PROT) HSP 1 Score: 339 bits (870), Expect = 2.780e-114 Identity = 182/259 (70.27%), Postives = 216/259 (83.40%), Query Frame = 1
Query: 10 LQALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
+ LLT+AFLTSL+ GA+TAGVPLLLAGLGEQISEKAGVLN+GIEGMML GAY GF+ AY SGS LGFL G GG++VA ++ALLC+R GLNQIVIGI +T+G EG+TALLHF QF+++YPRL+ A +P LS IP++G ALF P+VYLAV L+ VL W+FR T +GL+L+AAG KPAALDAAGV V R+AAVLATG LAG+GGA++AN+GAGLF+PFMT GAGFIGIVLAMLARGRP+WVLLGA LFG L
Sbjct: 1 MDGLLTQAFLTSLVLGAITAGVPLLLAGLGEQISEKAGVLNVGIEGMMLAGAYLGFLVAYSSGSIWLGFLGGAGGGLLVALLMALLCVRLGLNQIVIGIALTLGAEGMTALLHFFQFAQSYPRLEGAATLPIPLLSAIPVIGPALFDRHPVVYLAVALVFVLAWVFRRTALGLDLQAAGDKPAALDAAGVDVIGIRTAAVLATGALAGIGGAFLANIGAGLFIPFMTNGAGFIGIVLAMLARGRPVWVLLGALLFGACL 259
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Match: UPI0015EE4ED2 (ABC transporter permease n=1 Tax=Chthonobacter albigriseus TaxID=1683161 RepID=UPI0015EE4ED2) HSP 1 Score: 339 bits (869), Expect = 3.950e-114 Identity = 179/259 (69.11%), Postives = 212/259 (81.85%), Query Frame = 1
Query: 10 LQALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMMLFGAYTGFVAAYYSGSFALGFLMGGVGGMVVAAIVALLCIRHGLNQIVIGIGVTIGFEGLTALLHFVQFSKTYPRLDQAPVWELPGLSQIPIVGKALFGHSPIVYLAVLLIAVLGWLFRSTYVGLNLEAAGAKPAALDAAGVSVTRTRSAAVLATGFLAGLGGAYMANVGAGLFVPFMTGGAGFIGIVLAMLARGRPIWVLLGAALFGISL 786
+ AL TEAFLT+L+ GAVTAG+PL+LAGLGEQISEKAGVLNIGIEGMML GAYTGF+ AY++GS LGF G +GGM VA+++AL C+R GL+QIVIGI +T+G EGLTALLH QFS++YPRL+ +PGLS +P++G ALF PI+YLA+ +AV W+FRST +GL L+AAG KPAALDAAGV V R+ AVL TG LAGLGGA+MA VGAG+FVPFMT GAGFIGIVLAMLARGRP+WVLLGA LFG L
Sbjct: 1 MSALFTEAFLTALILGAVTAGIPLMLAGLGEQISEKAGVLNIGIEGMMLIGAYTGFLVAYFTGSIWLGFFSGSLGGMAVASLMALFCVRLGLSQIVIGIALTLGAEGLTALLHHFQFSQSYPRLEAVESLAIPGLSALPVIGPALFDRPPIIYLAIAAVAVTAWVFRSTNLGLALQAAGDKPAALDAAGVDVIAVRTGAVLTTGLLAGLGGAFMAEVGAGIFVPFMTNGAGFIGIVLAMLARGRPLWVLLGALLFGACL 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19467.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19467.2.1 >prot_P-wetherbeei_contig19467.2.1 ID=prot_P-wetherbeei_contig19467.2.1|Name=mRNA_P-wetherbeei_contig19467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp MEALQALLTEAFLTSLLFGAVTAGVPLLLAGLGEQISEKAGVLNIGIEGMback to top mRNA from alignment at P-wetherbeei_contig19467:498..1283+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19467.2.1 ID=mRNA_P-wetherbeei_contig19467.2.1|Name=mRNA_P-wetherbeei_contig19467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig19467:498..1283+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19467:498..1283+ >mRNA_P-wetherbeei_contig19467.2.1 ID=mRNA_P-wetherbeei_contig19467.2.1|Name=mRNA_P-wetherbeei_contig19467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig19467:498..1283+ (Phaeothamnion wetherbeei SAG_119_79)back to top |