mRNA_P-wetherbeei_contig1946.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A6H5JMT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT0_9PHAE) HSP 1 Score: 189 bits (479), Expect = 4.060e-48 Identity = 177/501 (35.33%), Postives = 232/501 (46.31%), Query Frame = 1
Query: 343 GAAILLYCTQVAKGTLNPTWQVIETAWIEG-GRVPALEHEVGFVLEVSIVSPPPSSGAANVRPNGSAA--------------ALRAR--------------IEVHKLRRLSIP--LAAAAALPINTVALELNDGHLYVPAWVAEAINPLEAAVSALHAADTLTPAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDTPRAAATAVVAEAPLENLAVLGDDT------DAEEFAALCRLREEVLAREAATAAMGTQLELALDAVAGARHVELEAKRRAANIERLKAALARQLELFEEEQAALSAEKAALVDDQADLSQLH---LEADRAASLQAAREVELGEEAAQHEETQLLLEARQARLVGHLQHIYPISYAAS-GEWAIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTAYPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQ-HMLSSLRRLI 1719
G +L T+V++ T+NPTW V E +W+ +V L+ +L V V P +S P S A A RAR I+V L L + L+ ALP + + +E+++G LY WV +A++ S P A A DD+ D E + R VL EA +L L+ A A A ++ L+ L+ Q EL E E+A+ EK L + + +L EA+ AA ++ R++E E + ++ +LLEAR+ARL LQ IYPI Y S E+ IRGL LPADL S DDE +SSALGY HLV M+AKYLQI LRYQVIYNASRSAVRDNVTG AYPLF+RGVE+ERFDR VYLL RDVEQ+ ARGV K G +L +L RL+
Sbjct: 129 GRGKVLLTTEVSQPTVNPTWPVPEASWLHADAQVEDLDGTRLLLLRVFAVDPDSASARDPSPPRQSPAPPPAQASGHTAVDAAARARDGTATLGPVVWECTIDVKGLTALPVGSRLSHLWALPADCLLVEMSNGGLYAADWVVQALSS-----------------------------------------------------NSALPEAVAGGRTRGXXXXXXXAWRDDSXXXXXXDQEPLDEMLR---RVLVLEAEAERGRVELAAQLEKAAPGDRKHCAAAESACAMDTLRLELSNQQELLEAEEASFLREKRYLEAETLAVEELLKGIAEAEEAA-IEDGRQLE--SEQRETFKSHVLLEARRARLTAELQAIYPIKYQGSLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNVTGVGVAYPLFRRGVEKERFDRGVYLLGRDVEQMLTARGVPAKRGSGQLLRNLERLM 570
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: D7FL64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL64_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.100e-43 Identity = 89/129 (68.99%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1339 QHIYPISYAAS-GEWAIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTAYPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQ-HMLSSLRRLI 1719
Q IYPI Y + E+ IRGL LPADL S DDE +SSALGY HLV M+AKYLQI LRYQVIYNASRSAVRDNVTG AYPLF+RGVE+ERFDR VYLL RDVEQ+ ARGV K G +L +L RL+
Sbjct: 3 QAIYPIKYQGNLKEFTIRGLELPADLYSIDDERISSALGYTAHLVCMLAKYLQISLRYQVIYNASRSAVRDNVTGVGVAYPLFRRGVEKERFDRGVYLLGRDVEQILTARGVPAKRGGGQLLRNLERLM 131
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A7S1XLF7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLF7_9STRA) HSP 1 Score: 157 bits (397), Expect = 8.080e-41 Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 1291 TQLLLEARQARLVGHLQHIYPISYAASGEWAIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTA----YPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQHMLSSLRRLIKAQED 1734
TQ LLEARQ RL+ LQ IYP+ + EWAIRGL LP ++ S+DDE VSSALGY HLV M++KYL +PLRYQ+++ +SRSA+RD V G+ A Y LF+RGVERERF+ AV +L ++ +QL AARGV P ML++L+ L + D
Sbjct: 28 TQFLLEARQTRLLAELQSIYPLQLLPNREWAIRGLELPREMLSKDDEHVSSALGYTAHLVLMLSKYLGVPLRYQILFYSSRSAIRDEVRDGANASNNTYYLFRRGVERERFESAVLMLQKNCDQLLAARGVPYAPELSMLANLQNLFVHEMD 179
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A7S3HCI1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCI1_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.640e-39 Identity = 113/280 (40.36%), Postives = 159/280 (56.79%), Query Frame = 1
Query: 919 VLGDDTDAEEFAALCRLRE---------EVLAREAATAAMGTQLELALDAVAGARHVELEAKRRAANIERLKAALARQLELFEEEQAALSA-EKAALVDDQADLSQLHLEADRAASLQAAREVELGEEAAQHEETQLLLEARQARLVGHLQHIYPISYAASGEWAIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTAYPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQHMLSSLRRLIKAQ 1728
VL ++TD + A L E EVL + T T L + L R ELE R A + +A L + F EE+ +A KA +++ A +L +LQ + V + + + + LLEAR+ +L+ LQ IYPI +GE+AIRG+ +PADL +R+DE V++ALGY VHL+ + +KYL+IPLRYQ+++ ASRS +RD V G T PLF+RG ERERFDRAV L R VEQL +RGV +P QH+LS++ L +
Sbjct: 164 VLDEETDPDTLATTSALSEGIAASQIHIEVLRKGLTTTLQKTDL-VRLQTKKNDRQAELEKLR--AEVAAAEAELTQNTIAFAEEKRIFAAGRKAEMMESTAACQEL-------LTLQQSARVTINNKKQDWLKIKFLLEARKIKLLSELQTIYPIERLDNGEFAIRGVEMPADLYAREDEQVAAALGYTVHLLLLASKYLEIPLRYQLLFMASRSFIRDPVVGNGTTLPLFRRGTERERFDRAVLWLKRAVEQLLQSRGVTYEPNQHILSNIHALFSCE 433
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A7R9U751_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U751_9STRA) HSP 1 Score: 159 bits (402), Expect = 4.750e-38 Identity = 115/264 (43.56%), Postives = 157/264 (59.47%), Query Frame = 1
Query: 967 LREEVLAREAATAAMGTQLELALDAVAGARHVELEAKRRAANIERLKAALARQLELFEEEQAALSAEKAALVDDQADLSQLHLEADRAASLQAAREVELGEEAAQHEET-----QLLLEARQARLVGHLQHIYPISYAASGEWAIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGG---STAYPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQHMLSSLRRLIKAQED 1734
LRE+ + A + L A+D+ A + + A++R IE LK+ +A + E+ L+AE+AAL D ++ +L R A Q + ++E EE A+ ET LLEARQ RL+ LQ IYP+ + EWAIRGL LP DL +DDE +SSALGY HLV M++KYL +PLRYQ++Y +SRSA+RD V G ST Y LF+RGVERERF+ AV +L ++VEQL AAR V +L +L L + D
Sbjct: 269 LREKQEQIKGLRAEVAAALAPAMDSGAANENARIMAEKR---IEALKSQVAAAQADLKREEDMLAAEEAALRRDTGEVREL---IQRIA--QESADLEKLEEDAEAAETTYLRTSFLLEARQTRLLAELQSIYPLQLMPNKEWAIRGLELPKDLSGKDDEHISSALGYAAHLVLMLSKYLAVPLRYQILYYSSRSAIRDEVRDGANASTTYCLFRRGVERERFELAVMMLQKNVEQLLAARDVPFDSSLSILPNLHNLFVHEMD 524
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A7S2SPW0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPW0_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.350e-36 Identity = 95/200 (47.50%), Postives = 125/200 (62.50%), Query Frame = 1
Query: 1132 LFEEEQAALSAEKAALVDDQADLSQLHLEADRAAS---LQAAREVELGEEAAQHEETQLLLEARQARLVGHLQHIYPISYAASGEWAIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTA--YPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQHMLSSLRRL 1716
L +E+A L+A++ ALV +Q L L EA +A + ++ EA +HE LLEARQ +LV LQ IYPI+ EWAI+GL LP D S DD+ VSSALGYVVH+V M+AKY QIPLRYQ+ Y ASRSAVRD V S +PL+++GV+ +RF++ + L DV+Q+ A RGV H+L L L
Sbjct: 299 LVNQEKAGLAADQEALVAEQRGLEALQEEARKALREKHTEVKETMDHRNEALRHE---FLLEARQVKLVSELQSIYPITETEHHEWAIKGLDLPEDCTSADDDQVSSALGYVVHVVVMLAKYFQIPLRYQLAYFASRSAVRDRVASNSREHIFPLYRKGVDPQRFEQGLAYLTADVDQVLAMRGVPFDRSFHLLKKLHLL 495
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A835Z4V6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V6_9STRA) HSP 1 Score: 144 bits (362), Expect = 7.550e-33 Identity = 157/505 (31.09%), Postives = 215/505 (42.57%), Query Frame = 1
Query: 190 LLASLRAILVRNLSC-PSLHCPALSDLMNEGPSPQKLPDVQA--SLLLPSS--NEKGAAILLYCTQVAKGTLNPTWQVIETAWIE---GGRVPALEHEVGFVLEVSIVSPPPSSGAANVRPNGSAAALRARIEVHKLRRLSIPLAAAAALPINTVALELNDGHLYVPAWVAEAINPLEAAVSALHAADTLTPAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDTPRAAATAVVAEAPLENLAVLGDDTDAEEFAALCRLREEVLAREAATAAMGTQLELALDAVAGARHVELEAKRRAANIERLKAALARQLELFEEEQAALSAEKAALVDDQADLSQLHLEADRAASLQAAREVELGE-EAAQHEETQLLLEARQARLVGHLQHIYPISY-AASGEWAIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTAYPLFKRGVERERFDRAVYLLARDVEQLAAARGVA 1674
LLASL++++ RN++ PS + P P +QA SL++ S + A+ +L+ + + TLNPTW V ETAW++ G + V E + P L A +++ +L+ L PL+ LP+N + LEL GHL+ W+ +AI AG S A T + AP G DAEE AL LR V EA AA+ +LE A R + R +AALA + E E A+ + L+ R L G L+ +YPI Y A+G +AIRGL L DL SR++EVV++AL Y HL +++AKYL + LRYQ+ ASRSAVRD V G + AYPLF+RG E ERF+R V LL+RDVEQL AARG+A
Sbjct: 28 LLASLKSVIARNVAYKPSNNLLHPQRHRERDPRESFAPGLQALPSLVVQLSAVGDGSASTILFTSAPSCPTLNPTWPVSETAWLDVADGEDLEGYSCAAVHVFEAGVDHP----------------LLSACLQLSELQPLPAPLSDIPRLPLNAILLELATGHLFAQPWIVDAI-------------------AGSRQGGGGWQGAHHHSA-------------------SSLQSPAFTFPLGSAP-------GPLYDAEEQEALDALRARVRPEEARAAALRARLEAAXXXXXXXXXXXXXXXXREHSCARARAALAHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGERARQARSAKLVARRGLELAGSLKEVYPIRYDTAAGGYAIRGLVL--DLGSREEEVVAAALAYATHLTSLLAKYLNVTLRYQLFCGASRSAVRDAVLG-TPAYPLFRRGAETERFERGVALLSRDVEQLLAARGLA 468
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A7S2BP53_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BP53_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.860e-29 Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 1381 AIRGLGLPADLQSRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGG-------STAYPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQHMLSSLRRLIKAQ 1728
AIRGL LP + +++DDEVVSSALGYV HL+ M++KYLQIPLRYQ++Y+ASRSAVRD V G S YPL++RGV+ RF A+ L +V Q+ RGV HML +L L K++
Sbjct: 1 AIRGLDLPYNYEAKDDEVVSSALGYVTHLMLMLSKYLQIPLRYQLVYSASRSAVRDRVAPGRETPSPTSNIYPLYRRGVDNARFVTAIEFLQANVRQVLTVRGVHYDEKAHMLKNLNELFKSE 123
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A067BJN6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BJN6_SAPPC) HSP 1 Score: 128 bits (321), Expect = 1.550e-28 Identity = 65/144 (45.14%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 1303 LEARQARLVGHLQHIYPISYAASGEWAIRGLG-LPADLQS-RDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTAYPLFKRGVERERFDRAVYLLARDVEQLAAARGVAVKPGQHMLSSLRRLIKAQ 1728
+ ++QA LV L IYPISY +GE+ I G+ + AD+ + +DDE++S+ALGY+ H V M+AKYL + LRY +++ +SRS +RD+V + YPLFKRGVE++RF++A L +DVEQL ARG+ + +L L+ ++ A+
Sbjct: 205 IRSKQAHLVVQLHDIYPISYVGAGEYCIGGIKFMNADVANGKDDEMLSTALGYIAHFVFMLAKYLDVNLRYTIVHCSSRSFMRDDVNDPNIEYPLFKRGVEKDRFEKACVFLKKDVEQLMQARGLEIVVNSQLLIRLKSIVDAE 348
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Match: A0A7S3XTF5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTF5_HETAK) HSP 1 Score: 119 bits (298), Expect = 1.200e-27 Identity = 58/130 (44.62%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 1291 TQLLLEARQARLVGHLQHIYPISYAASGEWAIRGLGLPADLQ---SRDDEVVSSALGYVVHLVAMIAKYLQIPLRYQVIYNASRSAVRDNVTGGSTAYPLFKRGVERERFDRAVYLLARDVEQLAAARGV 1671
T LL R+A+L L+HIYPI ++ G + IRG+ +P+DL SR+DE + +ALG++ H++ M++KYL PL Y+++YN SRS + D++T + +PL+KRG ERERF+R + LL RD++ L +G+
Sbjct: 22 TLFLLRCRRAKLAEQLRHIYPIEHSGQGNYNIRGIEIPSDLSQLWSREDEQIGTALGFICHILLMLSKYLMSPLPYRILYNPSRSMIYDHLTH-NIEFPLYKRGAERERFERGLALLDRDLDALLCEQGL 150 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1946.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1946.2.2 >prot_P-wetherbeei_contig1946.2.2 ID=prot_P-wetherbeei_contig1946.2.2|Name=mRNA_P-wetherbeei_contig1946.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=500bp MNEGPSPQKLPDVQASLLLPSSNEKGAAILLYCTQVAKGTLNPTWQVIETback to top mRNA from alignment at P-wetherbeei_contig1946:382..3675+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1946.2.2 ID=mRNA_P-wetherbeei_contig1946.2.2|Name=mRNA_P-wetherbeei_contig1946.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3294bp|location=Sequence derived from alignment at P-wetherbeei_contig1946:382..3675+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1946:382..3675+ >mRNA_P-wetherbeei_contig1946.2.2 ID=mRNA_P-wetherbeei_contig1946.2.2|Name=mRNA_P-wetherbeei_contig1946.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1500bp|location=Sequence derived from alignment at P-wetherbeei_contig1946:382..3675+ (Phaeothamnion wetherbeei SAG_119_79)back to top |