mRNA_P-wetherbeei_contig19443.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: D7G813_ECTSI (MATE efflux family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G813_ECTSI) HSP 1 Score: 211 bits (536), Expect = 5.530e-62 Identity = 116/187 (62.03%), Postives = 138/187 (73.80%), Query Frame = 1
Query: 1 AQALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
A ALPTLGAVL+DPCLSLVDT +VGRLG ++L AIGPC A FN VF TAS +VSTSVLVS +A DRA++GR + LA+ LAVS+GVI+ F AG L +MGAP +M+ AVPYL WRA A PAN+FLLVA GAFRG G+P+ L N ++VG VNLVLDP+LMF GL GAA+AT W
Sbjct: 118 ALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMNDRAAIGRTLTLASGLAVSMGVIMAVLFYVNSAGLLSLMGAPQEVMSLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPVLMFSCGLGVTGAAMATAAAQW 304
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A4D9CXB6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXB6_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.830e-56 Identity = 106/186 (56.99%), Postives = 135/186 (72.58%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAP-PALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
ALPTLGAVL+DPCLSLVDT+FVG+LG +AL ++GPCTAL+N++FATAS +F VST+VL++RY+A GD + GR + A +V+LG+ T + P+ L +MGA P ++ PYL WRA A+PANMFLLVA GAFRG G + NGL+VG VNLVLDP+LMF L AGAA+AT W
Sbjct: 57 ALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQW 242
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: W7U9X4_9STRA (Mate efflux family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9X4_9STRA) HSP 1 Score: 194 bits (493), Expect = 3.920e-55 Identity = 106/186 (56.99%), Postives = 135/186 (72.58%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAP-PALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
ALPTLGAVL+DPCLSLVDT+FVG+LG +AL ++GPCTAL+N++FATAS +F VST+VL++RY+A GD + GR + A +V+LG+ T + P+ L +MGA P ++ PYL WRA A+PANMFLLVA GAFRG G + NGL+VG VNLVLDP+LMF L AGAA+AT W
Sbjct: 216 ALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQW 401
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A5J4Z3T9_PORPP (Protein DETOXIFICATION 44, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3T9_PORPP) HSP 1 Score: 118 bits (296), Expect = 5.950e-28 Identity = 77/181 (42.54%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMF-PLGLRTAGAAVAT 546
A+P LG++LVDP L+LVDT VGRLG+ L A+GPC+AL + +FAT ++ +S ++LV+R A D V R + L+A +A+ +G IL L MGA ++ DA+ Y R +A+P LL GA RG R +L+G +NLVLDP+LMF PL + GAA+AT
Sbjct: 49 AVPALGSLLVDPFLTLVDTACVGRLGLRPLAAMGPCSALTSFIFATFQPMYTISPALLVTRASAKKDLPGVARAVRLSASVALGMGTILALLSFVFARPLLSAMGATELIIGDALAYFRARIVALPFMFLLLCLDGAHRGVQDTVTPFRISMLIGIINLVLDPLLMFGPLKMGLRGAAIAT 229
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A7Y2HN78_9BACT (MATE family efflux transporter (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2HN78_9BACT) HSP 1 Score: 112 bits (281), Expect = 1.270e-27 Identity = 80/185 (43.24%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
ALP LGA+ DP +S+VDT FVGRLG++ L A+G ++F+L F + T+ +V+R A GDR G++ V A LA + GV+ TA +A L +MGA L A A+ YL RALA PA + + G FRG + L L VNLVLDP+L+F LG GAA+ATV W
Sbjct: 38 ALPALGALAADPLVSIVDTAFVGRLGVVPLAALGVNASVFSLAFVV-FNFLAYGTTPMVARALARGDRRGAGKLAVEALTLACAAGVVATALLLALAEPVLALMGATGDLGAPALSYLRIRALAGPAVLIVTAGHGIFRGWQDTRTPLWITLGPNVVNLVLDPLLIFGLGWGLEGAAIATVVAQW 221
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A651DSW0_9BACT (MATE family efflux transporter (Fragment) n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A651DSW0_9BACT) HSP 1 Score: 114 bits (284), Expect = 2.310e-27 Identity = 80/187 (42.78%), Postives = 106/187 (56.68%), Query Frame = 1
Query: 1 AQALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
A A+P LGA+ DP +S++DT+FVGRLG + L A+G TALF++ F + T+ V+R AAGD A VGR I+ A LAV +GVI T + +MGA L ++ YL RALA PA + ++ G FRG + L L + VNLVLDP+L+F G GAA ATV W
Sbjct: 7 ALAVPALGALAADPLVSIIDTIFVGRLGTVPLAALGVNTALFSMAFVV-FNFLAYGTTPRVARAHAAGDTAEVGRSILQALTLAVGVGVIATVLLWTLARPLVALMGASGELEDPSLAYLRIRALAGPAVLLIMAGHGVFRGLQDTRTPLWITLGLNVVNLVLDPLLIFGFGWGLEGAAWATVVAQW 192
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A7Y3EE14_9BACT (MATE family efflux transporter n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3EE14_9BACT) HSP 1 Score: 114 bits (285), Expect = 1.670e-26 Identity = 80/185 (43.24%), Postives = 108/185 (58.38%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
ALP LGA+ DP +S+VDT FVGRLG++ L A+G ++F+L F + T+ +V+R A GDR + G++ V A LA + GV+ TA +A L +MGA L A A+ YL RALA PA + + G FRG + L L + VNLVLDP+L+F LG GAA+ATV W
Sbjct: 38 ALPALGALAADPLVSIVDTAFVGRLGVVPLAALGVNASVFSLAFVV-FNFLAYGTTPMVARALARGDRRAAGKLAVEALTLACAAGVVATALLLALAEPVLALMGATGELGAPALSYLRIRALAGPAVLIVTAGHGIFRGWQDTRTPLWITLGLNLVNLVLDPLLIFGLGWGLEGAAIATVVAQW 221
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A7Y2IQ76_9ACTN (MATE family efflux transporter (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IQ76_9ACTN) HSP 1 Score: 106 bits (264), Expect = 1.200e-24 Identity = 74/185 (40.00%), Postives = 103/185 (55.68%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
A+P LG ++ DP +SLVDT FVGR+G+ LGA+ TA F + F + + V+ AAGD ++I+ AV+LGV +A +A L +MGA ++ A YL RALA+PA + +LV GAFRG + L + + VNLVLDP+L++ L AGAA ATV W
Sbjct: 15 AIPALGTLVADPVVSLVDTAFVGRIGVPELGALAVATAAFGVAFFL-FNFLSYGVTPYVANAHAAGDTQRASQLIIAGLFAAVALGVASSAILIAGVGPILDLMGATADVVVPASTYLEIRALALPALLIVLVGHGAFRGYQDTKTPLWVSIGISVVNLVLDPLLIYGLDWGIAGAAWATVIAQW 198
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A5J4YI12_PORPP (Protein DETOXIFICATION 45, chloroplastic n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI12_PORPP) HSP 1 Score: 109 bits (273), Expect = 1.760e-24 Identity = 79/200 (39.50%), Postives = 104/200 (52.00%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSR--------------------YQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVAT 546
A+P +GAVLVDP LS+VDT++V RLG + L ++GPCT+LFN +F+ +F +STSV VS + D +I++ A LAV +G+ L L + A ALM A+ YL R LA+P LLV GA RG + L L GA+N VLDP+LMF G GAA AT
Sbjct: 151 AVPAMGAVLVDPFLSIVDTMYVARLGTLQLASLGPCTSLFNFIFSAWMPLFTISTSVAVSSCFKCDMASNPEDSDGVPADGLLCSPDARKAAQIVLFAGTLAVCVGLALLLVAWQFAEPLLRAVNASDALMPHALGYLRARLLALPFLFVLLVCDGAHRGVSDTRTPLVMSTLCGAINCVLDPLLMFQFGWGVPGAAAAT 350
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Match: A0A7Y2YUF7_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2YUF7_9BACT) HSP 1 Score: 107 bits (267), Expect = 4.700e-24 Identity = 73/185 (39.46%), Postives = 104/185 (56.22%), Query Frame = 1
Query: 7 ALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASSVFMVSTSVLVSRYQAAGDRASVGRIIVLAALLAVSLGVILTAAFVAAPAGFLGVMGAPPALMADAVPYLTWRALAMPANMFLLVAAGAFRGAGKPQMTLRNGLLVGAVNLVLDPILMFPLGLRTAGAAVATVRQHW 561
ALP LGA+ DP +S+VDT+FVGRLG++ L A+G T++F + F A + T+ LV+R DR G +++ A LLA +G + T + +MGA P L A+ YL RALA PA +F+ GAFRG + L L + +N+VLDP+ +F G GAA+AT+ W
Sbjct: 17 ALPALGALAADPLVSMVDTIFVGRLGIVPLAALGVNTSIFAMAF-VAFNFLAYGTTPLVARAVGREDRVGAGDVVMQAFLLAAVVGGVATLLLELLAVPIVNLMGAGPELQEPALSYLRIRALAGPAVLFVTAGHGAFRGYQDTRTPLLVTLGLNLINVVLDPLFIFGFGWGLEGAALATLIAQW 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19443.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19443.1.1 >prot_P-wetherbeei_contig19443.1.1 ID=prot_P-wetherbeei_contig19443.1.1|Name=mRNA_P-wetherbeei_contig19443.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp AQALPTLGAVLVDPCLSLVDTLFVGRLGMIALGAIGPCTALFNLVFATASback to top mRNA from alignment at P-wetherbeei_contig19443:29..589- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19443.1.1 ID=mRNA_P-wetherbeei_contig19443.1.1|Name=mRNA_P-wetherbeei_contig19443.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig19443:29..589- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19443:29..589- >mRNA_P-wetherbeei_contig19443.1.1 ID=mRNA_P-wetherbeei_contig19443.1.1|Name=mRNA_P-wetherbeei_contig19443.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig19443:29..589- (Phaeothamnion wetherbeei SAG_119_79)back to top |