mRNA_P-wetherbeei_contig19430.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19430.1.1
Unique NamemRNA_P-wetherbeei_contig19430.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A3D5DH88_9GAMM (MaoC_dehydrat_N domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DH88_9GAMM)

HSP 1 Score: 213 bits (542), Expect = 1.510e-68
Identity = 104/151 (68.87%), Postives = 126/151 (83.44%), Query Frame = 1
Query:   10 MTTLLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            M  L++D+IR+WIGR+D P RI V+RRDI+KY+IATEQ+  +Y++GDEAPPMFLFGADR LT + DLGPDGLR DSLLP LPLKRVMAGGV+QR+ R  VPGD L ITR+++DIYEK G+SG LIFVVYDI V    GE+VMQ+TQ RI+R
Sbjct:    1 MEKLINDEIRSWIGRADKPIRILVSRRDIVKYSIATEQLNPKYLHGDEAPPMFLFGADRALTRIPDLGPDGLRQDSLLPDLPLKRVMAGGVRQRHMRPIVPGDTLLITRSITDIYEKYGSSGALIFVVYDISVTSEEGELVMQQTQNRIIR 151          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A2E4FJ81_9BACT (MaoC_dehydrat_N domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4FJ81_9BACT)

HSP 1 Score: 196 bits (499), Expect = 7.100e-62
Identity = 99/154 (64.29%), Postives = 117/154 (75.97%), Query Frame = 1
Query:    1 TYIMTTLLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            T+  T L++ +IR W+GRSDAPQR+EVTRRDI+KYAIAT+Q   +Y  GDEAPPMFLF A +PL A+  L PDGL  D LLP LPL RVMAGGV   Y R   PGDVL +TRTL+DIYEKQGASGPLIFV Y + V   AGE+V++ET+ RI R
Sbjct:    7 THETTGLITPEIRQWVGRSDAPQRLEVTRRDIVKYAIATQQRLDKYRRGDEAPPMFLFNAHQPLVAVETLRPDGLTVDPLLPALPLTRVMAGGVTNTYHRRVRPGDVLLLTRTLTDIYEKQGASGPLIFVTYAVRVETEAGELVLEETRRRIFR 160          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A2D9JQJ2_9GAMM (Acyl dehydratase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JQJ2_9GAMM)

HSP 1 Score: 196 bits (497), Expect = 1.300e-61
Identity = 100/148 (67.57%), Postives = 116/148 (78.38%), Query Frame = 1
Query:   19 LLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            L+ D+IRAWIG+SD PQRIEVTRRDI KYA AT Q  ++Y+NGDEAPPMFLFGA  P+ AL  LGPDGLR DSLLP LPLKRVMAGG    + R+  PGDV+ + RTL+DIYEKQG SGPLIF+ Y I+V    GE VM+E QTRI+R
Sbjct:   10 LIDDNIRAWIGQSDPPQRIEVTRRDIQKYASATGQQLSKYINGDEAPPMFLFGAFNPIVALDALGPDGLRPDSLLPELPLKRVMAGGSTHTFYRSLHPGDVVDVQRTLTDIYEKQGKSGPLIFINYTIDVTMENGEPVMREMQTRIVR 157          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A3D4FW90_9BACT (MaoC_dehydrat_N domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A3D4FW90_9BACT)

HSP 1 Score: 194 bits (493), Expect = 4.340e-61
Identity = 98/151 (64.90%), Postives = 114/151 (75.50%), Query Frame = 1
Query:   10 MTTLLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            M+ LL+ +IR WIGRSD PQR+EVTRRDI+KYAIAT+Q Q +Y  GDEAPPMFLF A +PL  +  L  DGL  D LLP LPLKRVMAGGVK  Y R   PGD L +TRTL+DIYEKQG++GPLIFVVY + V    GE+VM ET+ RI R
Sbjct:    1 MSDLLTPEIRQWIGRSDEPQRLEVTRRDIVKYAIATQQRQQKYQQGDEAPPMFLFNAHQPLVPVEALRSDGLTMDPLLPDLPLKRVMAGGVKNTYHRPVKPGDALILTRTLTDIYEKQGSTGPLIFVVYAVRVETEDGELVMDETRRRIFR 151          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A7C7SLV7_9BACT (MaoC_dehydrat_N domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7C7SLV7_9BACT)

HSP 1 Score: 190 bits (483), Expect = 1.930e-59
Identity = 97/148 (65.54%), Postives = 113/148 (76.35%), Query Frame = 1
Query:   19 LLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            L++ +IR WIGRSD PQR+EVTRRDI+KY+IAT+Q   +Y  GDEAPPMFLF A +PL  L  L PDGL  D LLP LPLKRVMAGGVK  Y R    GD L +TRTL++IYEKQGASGPLIFVVY + V   AGE+VM+ET+ RI R
Sbjct:   13 LITPEIRQWIGRSDEPQRLEVTRRDIVKYSIATQQRLDKYRRGDEAPPMFLFNAHQPLVDLDALRPDGLTVDPLLPELPLKRVMAGGVKNTYHRPIKAGDALVLTRTLTEIYEKQGASGPLIFVVYAVRVETEAGELVMEETRRRIFR 160          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A2E7BL50_9BACT (Acyl dehydratase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E7BL50_9BACT)

HSP 1 Score: 189 bits (479), Expect = 5.850e-59
Identity = 95/151 (62.91%), Postives = 116/151 (76.82%), Query Frame = 1
Query:   10 MTTLLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            M+ LL+ +I+ W+GRSD PQR+EVTRRDI+KYAIAT+Q   +Y +GDEAPPMFLF A + L  L  L PDGL  D LLP LPLKRVMAGG++  Y +A  PGDVL +TRTL++IYEK G++GPLIFVVY I+V    GE VM ET+TRI R
Sbjct:    1 MSELLTPEIQQWVGRSDTPQRLEVTRRDIVKYAIATQQRLKKYQDGDEAPPMFLFNAHQGLVPLKALCPDGLPGDPLLPDLPLKRVMAGGIENTYHQAIRPGDVLILTRTLTNIYEKSGSTGPLIFVVYTIQVETDGGEPVMDETRTRIFR 151          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A2E8E8J9_9BACT (MaoC_dehydrat_N domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E8E8J9_9BACT)

HSP 1 Score: 188 bits (477), Expect = 1.300e-58
Identity = 94/148 (63.51%), Postives = 111/148 (75.00%), Query Frame = 1
Query:   19 LLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            LL+ +IR W+GR+D PQR++VTRRDI+KYAIATEQ Q +Y+ GDEAPPMFLF A +PL  +  L  DGL  D LLP LPLKRVMAGG+K  Y R   PGDVL +TRTL DIYEKQG +GPLIFV Y + V    GE+VM ET+ RI R
Sbjct:    7 LLTPEIREWVGRADTPQRLDVTRRDIMKYAIATEQRQDKYLRGDEAPPMFLFNAHQPLVQIETLRADGLTPDPLLPDLPLKRVMAGGIKNIYYRPIKPGDVLVLTRTLXDIYEKQGRTGPLIFVAYAVRVEXEDGELVMXETRRRIFR 154          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A2D6T7K7_9PROT (Acyl dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T7K7_9PROT)

HSP 1 Score: 187 bits (474), Expect = 3.060e-58
Identity = 94/148 (63.51%), Postives = 116/148 (78.38%), Query Frame = 1
Query:   19 LLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            +++ +IRAWIGRS+AP R+EV+RRDI+KYAIATEQ   +Y NGDEAPPMF FGA R +  L +LGPDG+   SL P LPLKRVMAGG   RY R   PGDVL  T +LSDI+EKQG+SGPLIF+VY+++V +  GE VM E+QTRI+R
Sbjct:    1 MITPEIRAWIGRSEAPVRVEVSRRDIVKYAIATEQRLEKYRNGDEAPPMFTFGAFREIVPLDELGPDGIAKQSLTPELPLKRVMAGGNTVRYHRPVRPGDVLVGTLSLSDIFEKQGSSGPLIFLVYELKVENEDGEPVMDESQTRIVR 148          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A521QEZ0_9HYPH (Acyl dehydratase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QEZ0_9HYPH)

HSP 1 Score: 186 bits (471), Expect = 9.340e-58
Identity = 89/148 (60.14%), Postives = 118/148 (79.73%), Query Frame = 1
Query:   19 LLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            L+S++ R  IG S+ P ++E++RRDI+KYA++TEQV  +Y+NGDEAPPMFLFGA RP+  +  LGPDG+ + SL+P LPLKRVMAGG K RY R   PGDVL  TR+L+D+YEK G+ GPLIF+VY ++V+  AGE V++ETQTRI+R
Sbjct:    3 LISEEARKMIGASEPPIQVEISRRDIMKYAVSTEQVLEKYLNGDEAPPMFLFGALRPIVPIDQLGPDGIANASLMPELPLKRVMAGGTKVRYFRPVKPGDVLVATRSLADMYEKSGSQGPLIFLVYKLDVKTGAGEPVVEETQTRIVR 150          
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Match: A0A2E6ZSE8_9BACT (MaoC_dehydrat_N domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E6ZSE8_9BACT)

HSP 1 Score: 184 bits (468), Expect = 2.760e-57
Identity = 97/151 (64.24%), Postives = 110/151 (72.85%), Query Frame = 1
Query:   10 MTTLLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAPPMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPVPGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIMR 462
            M  LL+ +I+ WIGRSD P  +EV+RRDI KYAIATEQ   +Y  GDEAPPMFLF A  PL  L  L PDGL  D+LLP LPLKRVMAGGVK  Y R   PGD L +TRTL+DIYEKQG SGPLIFV Y + V   AGE+VM+ET+ RI R
Sbjct:    1 MNNLLTPEIKDWIGRSDTPIPLEVSRRDIQKYAIATEQRVEKYRRGDEAPPMFLFNAHSPLVDLDQLRPDGLTVDALLPELPLKRVMAGGVKNTYHRPIRPGDQLVLTRTLTDIYEKQGRSGPLIFVTYVMRVETEAGELVMEETRKRIFR 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19430.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DH88_9GAMM1.510e-6868.87MaoC_dehydrat_N domain-containing protein n=1 Tax=... [more]
A0A2E4FJ81_9BACT7.100e-6264.29MaoC_dehydrat_N domain-containing protein n=2 Tax=... [more]
A0A2D9JQJ2_9GAMM1.300e-6167.57Acyl dehydratase n=1 Tax=Gammaproteobacteria bacte... [more]
A0A3D4FW90_9BACT4.340e-6164.90MaoC_dehydrat_N domain-containing protein n=2 Tax=... [more]
A0A7C7SLV7_9BACT1.930e-5965.54MaoC_dehydrat_N domain-containing protein n=1 Tax=... [more]
A0A2E7BL50_9BACT5.850e-5962.91Acyl dehydratase n=1 Tax=Acidobacteria bacterium T... [more]
A0A2E8E8J9_9BACT1.300e-5863.51MaoC_dehydrat_N domain-containing protein n=1 Tax=... [more]
A0A2D6T7K7_9PROT3.060e-5863.51Acyl dehydratase n=1 Tax=Rhodospirillaceae bacteri... [more]
A0A521QEZ0_9HYPH9.340e-5860.14Acyl dehydratase n=1 Tax=Reyranella sp. TaxID=1929... [more]
A0A2E6ZSE8_9BACT2.760e-5764.24MaoC_dehydrat_N domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19430contigP-wetherbeei_contig19430:34..498 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1504981.KO116_3559
PFAMsMaoC_dehydrat_N
Model size465
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC02479
KEGG koko:K09709
KEGG ReactionR09282
KEGG Pathwayko00720,ko01120,ko01200,map00720,map01120,map01200
KEGG ModuleM00376
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.27e-42
EggNOG OGsCOG2030@1|root,COG2030@2|Bacteria,1QXYH@1224|Proteobacteria,1T3KN@1236|Gammaproteobacteria
EC4.2.1.153
DescriptionN-terminal half of MaoC dehydratase
Cds size456
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186172.1521401-UTR-P-wetherbeei_contig19430:33..421683186172.1521401-UTR-P-wetherbeei_contig19430:33..42Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19430 34..42 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186172.1630645-CDS-P-wetherbeei_contig19430:42..4981683186172.1630645-CDS-P-wetherbeei_contig19430:42..498Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19430 43..498 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19430.1.1prot_P-wetherbeei_contig19430.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19430 43..498 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19430.1.1

>prot_P-wetherbeei_contig19430.1.1 ID=prot_P-wetherbeei_contig19430.1.1|Name=mRNA_P-wetherbeei_contig19430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
MTTLLSDDIRAWIGRSDAPQRIEVTRRDIIKYAIATEQVQARYVNGDEAP
PMFLFGADRPLTALADLGPDGLRSDSLLPPLPLKRVMAGGVKQRYQRAPV
PGDVLSITRTLSDIYEKQGASGPLIFVVYDIEVRDAAGEMVMQETQTRIM
R*
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mRNA from alignment at P-wetherbeei_contig19430:34..498+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19430.1.1 ID=mRNA_P-wetherbeei_contig19430.1.1|Name=mRNA_P-wetherbeei_contig19430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig19430:34..498+ (Phaeothamnion wetherbeei SAG_119_79)
ACCTACATTATGACCACCCTCCTCAGCGACGACATCCGCGCCTGGATAGG CCGCAGCGACGCGCCACAGCGCATCGAGGTCACACGCCGCGACATCATCA AGTACGCCATCGCGACCGAGCAGGTGCAGGCGCGTTATGTCAATGGTGAC GAAGCACCACCGATGTTTTTATTCGGTGCCGACCGGCCGCTGACCGCACT CGCCGATCTCGGGCCCGATGGTCTGCGCAGTGACAGTCTGTTACCACCTC TGCCGCTCAAGCGCGTGATGGCCGGTGGCGTCAAGCAGCGCTATCAGCGC GCGCCGGTGCCGGGCGATGTGCTCAGCATCACGCGTACCTTAAGTGACAT CTATGAGAAGCAGGGCGCCAGCGGGCCCTTGATCTTCGTCGTCTATGACA TCGAAGTACGCGACGCCGCAGGTGAAATGGTCATGCAGGAAACCCAGACA CGCATCATGCGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19430:34..498+

>mRNA_P-wetherbeei_contig19430.1.1 ID=mRNA_P-wetherbeei_contig19430.1.1|Name=mRNA_P-wetherbeei_contig19430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig19430:34..498+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCACCCTCCTCAGCGACGACATCCGCGCCTGGATAGGCCGCAGCGA
CGCGCCACAGCGCATCGAGGTCACACGCCGCGACATCATCAAGTACGCCA
TCGCGACCGAGCAGGTGCAGGCGCGTTATGTCAATGGTGACGAAGCACCA
CCGATGTTTTTATTCGGTGCCGACCGGCCGCTGACCGCACTCGCCGATCT
CGGGCCCGATGGTCTGCGCAGTGACAGTCTGTTACCACCTCTGCCGCTCA
AGCGCGTGATGGCCGGTGGCGTCAAGCAGCGCTATCAGCGCGCGCCGGTG
CCGGGCGATGTGCTCAGCATCACGCGTACCTTAAGTGACATCTATGAGAA
GCAGGGCGCCAGCGGGCCCTTGATCTTCGTCGTCTATGACATCGAAGTAC
GCGACGCCGCAGGTGAAATGGTCATGCAGGAAACCCAGACACGCATCATG
CGCTGA
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