mRNA_P-wetherbeei_contig1943.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A3C0TX94_9PROT (Carboxymuconolactone decarboxylase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TX94_9PROT) HSP 1 Score: 347 bits (891), Expect = 1.500e-120 Identity = 173/187 (92.51%), Postives = 181/187 (96.79%), Query Frame = 1
Query: 13 MLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKPANAPADY 573
MLSIE+AKKAA AEGIPE MAPLSIFRILLKNPPLARE+GNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPE+VILAVKDW+NSKILTDADKAVL ATDDIL++GAIS+AAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPP G+KPA AP DY
Sbjct: 1 MLSIEEAKKAAAAEGIPETMAPLSIFRILLKNPPLAREIGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEEVILAVKDWENSKILTDADKAVLHATDDILKYGAISEAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPDGKKPAYAPDDY 187
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A352KGI0_9PROT (Carboxymuconolactone decarboxylase family protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KGI0_9PROT) HSP 1 Score: 265 bits (678), Expect = 4.240e-88 Identity = 128/187 (68.45%), Postives = 152/187 (81.28%), Query Frame = 1
Query: 13 MLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKPANAPADY 573
MLSIEDAKKAA +EGI EAMAPLS+FRILLKNPPLARE+GNTLNMLLF+GNQLD RLRELIIMR+GW TGS YEWTQHWRV + + IPE+V+LA + W+N+ +LTDAD+AVL+ATD+ L G IS W EC KH+ N+A LE+V +IGNWR+ SQ+LLSL+VPLEEGV +W P G AP Y
Sbjct: 1 MLSIEDAKKAAASEGISEAMAPLSVFRILLKNPPLARELGNTLNMLLFQGNQLDARLRELIIMRIGWVTGSCYEWTQHWRVCMQLDIPEEVVLACRSWENADVLTDADRAVLRATDETLDSGRISPQTWAECAKHIKNDAELLEMVVAIGNWRLFSQLLLSLEVPLEEGVEAWAPDGLPAPRAPKGY 187
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A2E2J7L8_9GAMM (Carboxymuconolactone decarboxylase n=1 Tax=Polycyclovorans sp. TaxID=2024852 RepID=A0A2E2J7L8_9GAMM) HSP 1 Score: 246 bits (627), Expect = 2.450e-80 Identity = 113/187 (60.43%), Postives = 149/187 (79.68%), Query Frame = 1
Query: 13 MLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKPANAPADY 573
M+S+E+A+K A EG+PE MAPLS+FR+LL++P LAR +G L MLL +GN LDGRLRELIIMR+GW TGSNYEWTQHWR A M I EDV+LA + W+++ +LTDAD+AVL+ATD+ ++ G ISDA W EC +H+ + A+LE+V +IGNWRM SQ+LL+L++PLEEG+ W P G +PA AP D+
Sbjct: 1 MMSVEEAQKIAAREGLPEIMAPLSVFRVLLRHPALARALGGLLKMLLLEGNHLDGRLRELIIMRIGWLTGSNYEWTQHWRYARDMGIAEDVLLACRSWESATVLTDADRAVLRATDETMESGRISDATWAECARHIESVEARLELVVAIGNWRMFSQLLLTLRIPLEEGLEDWMPDGLRPARAPQDF 187
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: B0T9M5_CAUSK (Carboxymuconolactone decarboxylase n=4 Tax=Caulobacteraceae TaxID=76892 RepID=B0T9M5_CAUSK) HSP 1 Score: 227 bits (578), Expect = 7.910e-73 Identity = 108/184 (58.70%), Postives = 143/184 (77.72%), Query Frame = 1
Query: 1 PRIAMLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKP 552
PRI +LS+E+A AA + GI E MAPLS+FR+LL++P +A E+ +TL LLF+GN+LD RLRELIIMR+GW TGS YEWTQHWRVA G+ IPE + A +DW+ + L++AD+AVLQATDD L G ISDAAW+ C H+ +A ++E+V +IGNW M SQ+L SL++PLE+GV +WPP G+ P
Sbjct: 6 PRIDLLSLEEAANAAGSAGISEQMAPLSVFRVLLRHPAVAGELASTLTTLLFRGNKLDARLRELIIMRIGWRTGSVYEWTQHWRVARGLDIPEADLAASRDWRGAANLSEADRAVLQATDDTLDQGMISDAAWEACCLHLATDAERIELVVAIGNWTMFSQLLKSLRIPLEDGVEAWPPDGQAP 189
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A1G2WBB5_9CAUL (Carboxymuconolactone decarboxylase n=3 Tax=Caulobacteraceae TaxID=76892 RepID=A0A1G2WBB5_9CAUL) HSP 1 Score: 226 bits (577), Expect = 1.610e-72 Identity = 106/183 (57.92%), Postives = 140/183 (76.50%), Query Frame = 1
Query: 4 RIAMLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKP 552
R+ +LS+ AK AA A G+ E MAPLS+FR+LL++P +A E+ +TL LLF+GN+LD RLRELIIMR+GW TGS YEWTQHWRVA G++IPE + A +DW+ + LT+AD+AVLQATDD L G I DA W+ C +H+ +A ++E+V +IGNW M SQ+L SL++PLEEGV +WPP G P
Sbjct: 7 RVDLLSLAQAKAAASAAGVSEQMAPLSVFRVLLRHPDVAEELASTLTTLLFRGNRLDARLRELIIMRIGWRTGSVYEWTQHWRVARGLEIPEADLAATRDWQGAPNLTEADRAVLQATDDTLDRGMIDDATWETCCRHLATDAERIELVVAIGNWTMFSQLLKSLRIPLEEGVEAWPPDGRAP 189
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A522CE16_9CAUL (Carboxymuconolactone decarboxylase family protein n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A522CE16_9CAUL) HSP 1 Score: 223 bits (569), Expect = 1.730e-71 Identity = 106/184 (57.61%), Postives = 138/184 (75.00%), Query Frame = 1
Query: 1 PRIAMLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKP 552
PR+A+LS +DA AA GI E MAPLS+FR+LL++P +A E+ +TL LLF+GN+LD RLRELIIMR+GW TGS YEWTQHWRVA G+ IP + A +DW+ + +DAD+AVLQATDD L G ISD W+ C +H+ EA ++E+V +IGNW M SQ+L SL++PLE+GV +WPP G P
Sbjct: 6 PRVALLSADDAASAAKLAGISEQMAPLSVFRVLLRHPAVAGELASTLTTLLFRGNKLDARLRELIIMRIGWRTGSVYEWTQHWRVARGLDIPAADLAATRDWRGANNFSDADRAVLQATDDTLDEGMISDRTWEACCRHLSTEAERIELVIAIGNWTMFSQLLKSLRIPLEDGVEAWPPDGVGP 189
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A2E7XH69_9GAMM (Carboxymuconolactone decarboxylase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7XH69_9GAMM) HSP 1 Score: 222 bits (565), Expect = 7.240e-71 Identity = 108/187 (57.75%), Postives = 139/187 (74.33%), Query Frame = 1
Query: 1 PRIAMLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKPANA 561
P I +LS +A A G PE MA LS+FR+LLK+P LA+ V L LLF GNQLD RLREL+IMR+GWATG+ YEWTQHWRVA ++IP++ +LAV+DWKNS IL + DKAVLQATDD ++ G I+D +W++ K +P+EA Q+E+V +IGNW + SQ+L SL +PLEEG SWPP G+ NA
Sbjct: 4 PIIPLLSEAEALNVAQEHGFPEQMASLSVFRVLLKHPDLAKSVVQLLTTLLFTGNQLDKRLRELLIMRIGWATGAVYEWTQHWRVAKDLEIPDEDLLAVRDWKNSTILDETDKAVLQATDDAIEEGFITDTSWQKIKKMIPDEAQQIELVIAIGNWSLFSQLLKSLHIPLEEGTESWPPDGQVSPNA 190
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A2E5BVG8_9HYPH (Carboxymuconolactone decarboxylase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BVG8_9HYPH) HSP 1 Score: 222 bits (566), Expect = 8.610e-71 Identity = 107/184 (58.15%), Postives = 143/184 (77.72%), Query Frame = 1
Query: 1 PRIAMLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKP 552
PR+ +LSI +AKK A + GI E MAPLS+FR+LL++P LA+E+ +TLN LLF GN+LD RLRELIIMR+GW T S YEWTQHWRVA ++I ED ILAV++W+ S +L+D DKAV++ATD+ L G IS++ W E VK + + ++E+V +IGNW + SQ+L SL++PLEEGV SWPP G+ P
Sbjct: 7 PRVPLLSIAEAKKIAASNGISEQMAPLSVFRVLLRHPGLAKELSSTLNALLFDGNKLDARLRELIIMRIGWKTASLYEWTQHWRVARMLEISEDDILAVREWQTSTLLSDLDKAVMKATDETLDGGMISESTWAELVKGLNSSEERIELVVAIGNWTLFSQLLKSLKIPLEEGVDSWPPDGKSP 190
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A7HU36_PARL1 (Carboxymuconolactone decarboxylase n=12 Tax=Alphaproteobacteria TaxID=28211 RepID=A7HU36_PARL1) HSP 1 Score: 220 bits (561), Expect = 2.840e-70 Identity = 104/184 (56.52%), Postives = 139/184 (75.54%), Query Frame = 1
Query: 1 PRIAMLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKP 552
PR+ +LS+ +A AA GI E MAPLS+FR+LL++P +A E+ +TLN LLF+GN+LD RLRELIIMR+GW T S YEWTQHWRVA + IPE ++A +DWKN+ L+DAD+AVL ATD+ L G ISDA W C H+ ++E+V +IGNW + SQ+L SL++PLE+GV++WPP G+KP
Sbjct: 6 PRVPLLSMAEAAAAAAKAGISEQMAPLSVFRVLLRHPDVASELASTLNTLLFQGNKLDARLRELIIMRIGWKTKSLYEWTQHWRVARMLDIPEADLVATRDWKNASCLSDADRAVLAATDETLDGGMISDATWTACAAHLKTAEERIELVVAIGNWTLFSQLLKSLKIPLEDGVVAWPPDGKKP 189
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Match: A0A1E4GQG9_9CAUL (Carboxymuconolactone decarboxylase n=4 Tax=Phenylobacterium TaxID=20 RepID=A0A1E4GQG9_9CAUL) HSP 1 Score: 218 bits (555), Expect = 2.730e-69 Identity = 103/184 (55.98%), Postives = 138/184 (75.00%), Query Frame = 1
Query: 1 PRIAMLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGNQLDGRLRELIIMRLGWATGSNYEWTQHWRVAVGMKIPEDVILAVKDWKNSKILTDADKAVLQATDDILQHGAISDAAWKECVKHVPNEAAQLEIVASIGNWRMISQILLSLQVPLEEGVMSWPPHGEKP 552
PR+ ML + DA+ AA G+PEA A LS+FRILL++P +A+ +G+ L LLF GN LD RLREL+I+R+GW TG+ YEWTQHWRVA G+ IPE +LAV+ W+ + L++AD+AVLQATDD L GAI D AW C +H+ ++ ++E+V ++GNW M SQ+L SLQ PLE+GV +WPP GE P
Sbjct: 5 PRVPMLDLPDARDAARRHGLPEAFAELSVFRILLRHPTVAQRLGDLLQTLLFTGNALDPRLRELLILRIGWRTGAVYEWTQHWRVARGLDIPEADLLAVRRWREAAELSEADRAVLQATDDTLDKGAIGDEAWAACCRHLRSDQERIELVIALGNWTMFSQLLRSLQAPLEDGVAAWPPDGEVP 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1943.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1943.4.1 >prot_P-wetherbeei_contig1943.4.1 ID=prot_P-wetherbeei_contig1943.4.1|Name=mRNA_P-wetherbeei_contig1943.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp MLSIEDAKKAAIAEGIPEAMAPLSIFRILLKNPPLAREVGNTLNMLLFKGback to top mRNA from alignment at P-wetherbeei_contig1943:3480..4055- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1943.4.1 ID=mRNA_P-wetherbeei_contig1943.4.1|Name=mRNA_P-wetherbeei_contig1943.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig1943:3480..4055- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1943:3480..4055- >mRNA_P-wetherbeei_contig1943.4.1 ID=mRNA_P-wetherbeei_contig1943.4.1|Name=mRNA_P-wetherbeei_contig1943.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig1943:3480..4055- (Phaeothamnion wetherbeei SAG_119_79)back to top |