mRNA_P-wetherbeei_contig1942.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1942.6.1
Unique NamemRNA_P-wetherbeei_contig1942.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A835YM92_9STRA (Lycopene beta cyclase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM92_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 1.660e-134
Identity = 204/326 (62.58%), Postives = 237/326 (72.70%), Query Frame = 1
Query:   79 FDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFAASPEEAAGLSKEPTFMYIMPLGRSA---GGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADAL 1047
            FDV VIGSGP G+VMAT+LAEK GLRVA++DP L + WVPNYGVWLEEWE L+  L IGL  CL RTW VTDCFYG SHGVP  ERLRIERPYARV+R   +  L  RM +AG + I+   D  +V HT  GS  +L  G ++  RMI+D SG + +L  R+     DPGFQIAYG+EC+V  DLGPYDP+AMLFMDYRT FA +  +   L   PTF+Y MPLGRS    GG QRVFFEETSLVARPPM  +EC+ R+Y RLAH GIEVTKV +EEFC IPMG +LP  DQR+V F  A GLVHA+TGY  VRMLAAA   ADA+
Sbjct:   26 FDVAVIGSGPGGSVMATMLAEKHGLRVAVIDPALERGWVPNYGVWLEEWEALDRLLDIGLGACLSRTWSVTDCFYGQSHGVPEGERLRIERPYARVARHAMRETLRDRMIRAGAVRIQGGVDAETVQHTATGSTFKLDTGDVVTARMILDCSGHNTKLVERQGP--HDPGFQIAYGMECDVKDDLGPYDPDAMLFMDYRTSFAPAARQQR-LRAVPTFLYAMPLGRSGSGGGGAQRVFFEETSLVARPPMAIEECKERLYERLAHHGIEVTKVHEEEFCVIPMGGSLPKFDQRVVGFAGAGGLVHASTGYMQVRMLAAAKPAADAI 348          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A290WNI4_PETFA (Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A290WNI4_PETFA)

HSP 1 Score: 403 bits (1035), Expect = 5.320e-134
Identity = 221/389 (56.81%), Postives = 270/389 (69.41%), Query Frame = 1
Query:    1 MAFDF----TSLGSWLGGGWGSKKDDAGSD-----FDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFA----ASPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL--GGPRGAAELAAVAAGGAAWRS 1122
            MAFD       L S + GG GSK   AG++     +D  ++G GPAG VMATLLAEK GL+V I+DPNL KRW+PNYGVW+EEWE L+  LQIGL +CLDR W VTD F+GGSHG P +ER RI+RPYARVSR K +A+L SR++ AGV  I    D  ++ H+  G+ + L DG+ +  R++VD SG  + L  R      +PG QIAYG E EV     PYD  AMLFMDYRTD+      SPE+A GL   PTF+Y MP+G +  G++R+FFEETSLVARPP+ FD C+ R+YRRL H GIEVTKV DEE C IPMG A+P++ QR+VAFG A+GLVHAATGY  VRMLAAAG V+ A+AAEL  GGP G +E AA  A  A W S
Sbjct:    1 MAFDLGEMMEQLKSSMNGG-GSKSRGAGANGKSVVYDTAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWESLDRDLQIGLGDCLDRKWEVTDSFFGGSHGTPADERCRIDRPYARVSRDKMQANLKSRLSAAGVTKIAGKVDAKTMEHSAEGTSVCLEDGQKIDCRLLVDCSGHYSELVERVGD--HNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDKATLSPEDAQGLDDIPTFLYAMPMGAAPNGQRRIFFEETSLVARPPIEFDLCKERLYRRLEHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAAAGPVSRAIAAELKKGGP-GTSEAAARRAYQALWPS 385          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A290WNJ8_9PHAE (Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A290WNJ8_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 1.760e-133
Identity = 218/387 (56.33%), Postives = 272/387 (70.28%), Query Frame = 1
Query:    1 MAFDFTSLGSWL-GGGWGS--------KKDDAGSDFDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFA----ASPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL--GGPRGAAELAAVAAGGAAW 1116
            M+FDF  +   L G  +GS        K+DD    +D  ++G GPAG VMATLLAEK  L+V IVDPN+ KRW+PNYGVW+EEWE L+  LQIGL +CLDRTW VTD F+GGSHG+P +ER RI+RPYARVSR K +A+L +R+A AGV  I    D  +V HT  GS + L +G  L  R++VD SG  + L  R+ G+ ++PG QIAYG E EV     PYD +AMLFMDYRTD+     +SPEE   L   PTF+Y MP+G+++ G+ ++FFEETSLVARPP+ FD C+ R+Y+RL H GIEVTKV DEE C IPMG  +P +DQR+VAFG A+GLVHAATGY  VRMLAA+ GVA+A+A EL  GGP GA+  AA  A  A W
Sbjct:    1 MSFDFGQMVEHLIGSVYGSSSRRDVEKKQDDV--LYDAAIVGYGPAGGVMATLLAEKHDLKVCIVDPNIEKRWIPNYGVWVEEWESLDRSLQIGLGDCLDRTWEVTDSFFGGSHGIPTSERCRIKRPYARVSRDKMQANLKTRLAAAGVTKIASKVDASTVKHTAEGSTVELENGMKLSCRLLVDCSGHYSELVERD-GV-NNPGVQIAYGAEVEVKDGHAPYDEKAMLFMDYRTDYINPEESSPEEQRELRDIPTFLYAMPMGKASNGRSKIFFEETSLVARPPIAFDLCKERLYKRLKHHGIEVTKVVDEELCYIPMGGPIPKLDQRVVAFGGASGLVHAATGYMHVRMLAASRGVAEAIATELKSGGP-GASRAAARRAYQALW 382          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A6H5JIL6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL6_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 7.990e-133
Identity = 213/371 (57.41%), Postives = 263/371 (70.89%), Query Frame = 1
Query:   43 GWGSKKDDAGSD-----FDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFA----ASPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL--GGPRGAAELAAVAAGGAAWRS 1122
            G G   D  G++     +D  ++G GPAG VMATLLAEK GL+V I+DPNL KRW+PNYGVW+EEWE L+  LQIGL +CLDRTW VTD F+GGSHG P +ER RI+RPYARVSR K +A+L SR++ AGV  I+   D  ++ H+  G+ +RL DG+ +  R++VD SG  + L  R      +PG QIAYG E EV     PYD  AMLFMDYRTD+A     SPEE  GL   PTF+Y MP+G +  G++R+FFEETSLVARPP++FD C+ R+YRRL H GIEVTKV DEE C IPMG A+P++ QR+VAFG A+GLVHAATGY  VRMLAA+G V+ A+AAEL   GP G +E AA  A  A W S
Sbjct:   89 GGGKTGDGRGANGKRVVYDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWEALDKDLQIGLGDCLDRTWEVTDSFFGGSHGTPADERCRIDRPYARVSRDKMQANLKSRLSAAGVTKIKGKVDAKTLEHSADGTSVRLDDGQQIDCRILVDCSGHYSELVERVG--EHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYADKAELSPEEVEGLDDTPTFLYAMPMGAAPNGQRRIFFEETSLVARPPISFDLCKERLYRRLKHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAASGAVSRAIAAELKKDGP-GTSEAAARRAYQALWPS 456          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A290WNK2_9PHAE (Lycopene beta-cyclase n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A290WNK2_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.510e-132
Identity = 216/390 (55.38%), Postives = 269/390 (68.97%), Query Frame = 1
Query:    1 MAFDFTSL-----GSWLGGGWGSKKDDAGSD-----FDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFA----ASPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL--GGPRGAAELAAVAAGGAAWRS 1122
            MAFD   +     GS +GG  GS  +  G       +DV ++G GPAG VMATLLAEK GL V I+DPNL KRW+PNYGVW+EEWE L+  LQIGL +CLD TW VTD F+GGSHGVP +ER R  R YARVSR K +A+L +R++ AGV  I+   D  +V H+  G+ + L DG+ +  R++VDSSG  + L  R      +PG QIAYG+E EV     PYD  AMLFMDYRTD+      S EE+  L   PTF+Y MP+G +  G++R+FFEETSLVARPP++FD C+ R+YRR+ H GIE+TKV DEEFC IPMG ++P + QR+VA G A+GLVHAATGY  VRMLAA+GGVA A+A+EL  GGP GA+E AA  A  A W S
Sbjct:    1 MAFDLGQMMEQMMGS-IGGNSGSSSNGGGDSSKGVVYDVAIVGYGPAGGVMATLLAEKHGLNVCIIDPNLEKRWIPNYGVWVEEWEALDKDLQIGLGDCLDLTWDVTDSFFGGSHGVPADERCRTNRAYARVSRDKMQANLKARLSAAGVRKIKGRVDAKTVEHSAEGTTMCLDDGQQINCRLVVDSSGHFSELVERVG--EHNPGVQIAYGVEVEVKDGHAPYDENAMLFMDYRTDYVDKSELSEEESKELDGTPTFLYAMPMGEAPNGRRRIFFEETSLVARPPISFDLCKERLYRRMKHHGIEITKVMDEEFCYIPMGGSMPVLTQRVVALGGASGLVHAATGYMHVRMLAASGGVARAIASELKKGGP-GASEAAARRAYQALWPS 386          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A290WNK0_9PHAE (Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015 RepID=A0A290WNK0_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 1.770e-132
Identity = 209/352 (59.38%), Postives = 255/352 (72.44%), Query Frame = 1
Query:   22 LGSWLGGGWGS--KKDDAGSDFDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFAA----SPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL 1059
            LGS  G G  S  +KD     +D  ++G GPAG VMATLLAEK GL+V I+DPNL KRW+PNYGVWLEEWE L+  LQIGL +CL+RTW VTD F+GGS+GVP  ER RI+R Y RVSR K +A+L +R++ AGV  I    DP +V H+T G+ LRL DG+ +  R++VD SG  + L  R  G+ D+PG QIAYG E EV     PYD  AMLFMDYRTD+ A    S +E   L + PTF+Y MPLG+S  G++++FFEETSLVARPP++FD C+ R+ RRL H GI V KV DEEFC IPMG A+P +DQR+VAFG AA LVHAATGY  VRMLAAAGGVA A+A+EL
Sbjct:   13 LGSAAGNGGNSERRKDVV---YDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWLEEWEALDKDLQIGLGDCLERTWEVTDSFFGGSNGVPPGERCRIKRAYGRVSRDKMQANLKARLSSAGVAKIRGRVDPKTVEHSTEGTSLRLDDGERIDCRLLVDCSGHRSELVERS-GV-DNPGVQIAYGAEVEVLDGHAPYDENAMLFMDYRTDYVAETELSADELRELDEVPTFLYAMPLGKSPNGRRKIFFEETSLVARPPISFDLCKERLDRRLKHHGITVAKVLDEEFCYIPMGGAMPKLDQRVVAFGGAAALVHAATGYMQVRMLAAAGGVARAIASEL 359          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A290WNI7_UNDPI (Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A290WNI7_UNDPI)

HSP 1 Score: 394 bits (1011), Expect = 2.600e-130
Identity = 198/332 (59.64%), Postives = 243/332 (73.19%), Query Frame = 1
Query:   79 FDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFA-----ASPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL 1059
            +D  ++G GPAG VMATLLAEK GL+V I+DPNL KRW+PNYGVW+EEWE L+  LQIGL +CLD TW VTD F+GGSHGVP +ER RI R YARVSR K +A+L +R+A AGV  I    D  +V H+  G+ + L DGKL+  R++VDSSG  + L  R      +PG QIAYG E EV     PYD  AMLFMDYRTD+       S +E   L + PTF+Y MP+G +  G++R+FFEETSLVARPP++FD C+ R+YRR+ H GIEVTKV DEEFC IPMG A+P + QR+VAFG A+GLVHAATGY  VRMLAA+GGVA A+A+EL
Sbjct:   37 YDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWEALDKDLQIGLGDCLDLTWEVTDSFFGGSHGVPADERCRINRAYARVSRDKMQANLKARLAAAGVDKITGRVDAKTVEHSAEGTTMCLDDGKLINCRLVVDSSGHFSELVERVG--EHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDDKSELSEKELRELDEIPTFLYAMPMGEAPNGRRRIFFEETSLVARPPISFDLCKERLYRRMKHHGIEVTKVMDEEFCYIPMGGAMPVLTQRVVAFGGASGLVHAATGYMHVRMLAASGGVARAIASEL 366          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A290WNI6_9PHAE (Lycopene beta-cyclase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A290WNI6_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 9.280e-130
Identity = 204/352 (57.95%), Postives = 256/352 (72.73%), Query Frame = 1
Query:   79 FDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFA----ASPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL--GGPRGAAELAAVAAGGAAW 1116
            +D  ++G GPAG VMATLLAEK GL+V I+DPNL KRW+PNYGVW+EEWE L+  LQIGL +CLDR W VTD ++GGSHGVP +ER RI+RPYARVSR K +A+L SR+A AGV  I    D  ++ H+  G+ + L +G+ +  R++VD SG  + L  R      +PG QIAYG E EV     PYD  AMLFMDYRTD+      S EEA GL + PTF+Y MP+G ++ G++++FFEETSLVARPP++FD C+ R++RRL H GIEVTKV DEE C IPMG A+P ++QR+VAFG A+GLVHAATGY  VRMLAA+G V+ A+AAEL  GGP G +E AA  A  A W
Sbjct:   35 YDAAIVGYGPAGGVMATLLAEKHGLKVCIIDPNLEKRWIPNYGVWVEEWESLDKDLQIGLGDCLDRKWEVTDSYFGGSHGVPADERCRIDRPYARVSRDKMQANLKSRLAAAGVTKITGKVDAKTMEHSPEGTSVCLENGQQIDCRLLVDCSGHYSELVERVG--EHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDKADLSAEEAKGLDEIPTFLYAMPMGTASNGRKKIFFEETSLVARPPISFDLCKERLHRRLKHHGIEVTKVMDEELCYIPMGGAMPNLNQRVVAFGGASGLVHAATGYMHVRMLAASGPVSRAIAAELKKGGP-GTSEAAARRAYQALW 383          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A290WNJ9_9PHAE (Lycopene beta-cyclase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A290WNJ9_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 3.320e-125
Identity = 201/355 (56.62%), Postives = 254/355 (71.55%), Query Frame = 1
Query:   25 GSWLGGGWGSKKDDAGSD-FDVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFAA----SPEEAAGLSKEPTFMYIMPLGRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL--GGP 1068
            G++   G GSK    G + +DV V+G GPAG VMATLLAEK G +V IVDP+L K+W+PNYGVW+EEWE L+  LQIGL ECLDRTW VTD ++GGSHGVP  ER RI R Y RVSR K +A+L +R+  AGV  I+   D  +V H + G+ + L DG  LR R+++D +G  + L  ++ G+ + PG QIAYG E EV     PYD +AMLFMDYRTD+ +    S +EA  L + PTF+Y MP+G+   G++R+FFEETSLVARPP++FD C+ R+ RRL H GIEVTK+ DEE C IPMG ALP +DQR+VAFG A+GLVHA+TGY  VRMLAA+  VA A+A EL  GGP
Sbjct:   18 GNYGSSGNGSKNGGGGDEVYDVAVVGYGPAGGVMATLLAEKHGFKVCIVDPSLEKQWIPNYGVWVEEWEALDRLLQIGLGECLDRTWDVTDSYFGGSHGVPNEERCRINRAYGRVSRNKMQANLKARLDAAGVAKIKGKVDAATVKHASEGTTVCLDDGVELRCRLLLDCTGHYSELVEKD-GVHN-PGVQIAYGAEVEVKDGHEPYDEKAMLFMDYRTDYVSKDDLSAQEAKELEEVPTFLYAMPMGQGPEGRKRIFFEETSLVARPPISFDLCKERLKRRLEHHGIEVTKLLDEELCYIPMGGALPKLDQRVVAFGGASGLVHASTGYMHVRMLAASFPVAHAIARELKKGGP 370          
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Match: A0A4D9D3Z6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3Z6_9STRA)

HSP 1 Score: 353 bits (905), Expect = 7.900e-117
Identity = 184/329 (55.93%), Postives = 228/329 (69.30%), Query Frame = 1
Query:   82 DVVVIGSGPAGAVMATLLAEKSGLRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCFYGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPGSVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIAYGIECEVAGDLGPYDPEAMLFMDYRTDFA--ASPEEAAGLSKEPTFMYIMPLGRSAGGKQ-RVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEEFCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALAAEL 1059
            DV ++G GPAG+VMA LLA++  L+V ++DP L +RW+PNYGVW+EEWE LE  L   L  CL +TWP TD F GGSHG+P++ERLRI+R Y RV R   K  L +R    G + + KA D  SVVH   GS LRL DG  +R R ++D SG+ +RL   +     DPG QIAYGIECEV  D+ PY  +AM  MDYRTD+    + E     ++EPTFMY MP+G +  GK+ RVFFEETSLVARPPM+FDEC++RM  RL +LG  V  VE+EEFC IPMG A+P   QR+VAFG A GLVHAATGYQ+ R +AAAG  A A+A EL
Sbjct:    7 DVAIVGGGPAGSVMAALLAQQHELKVVMMDPKLDQRWIPNYGVWVEEWEALEKLLGFSLRNCLMKTWPNTDLFCGGSHGIPVDERLRIKRAYGRVDRTALKNELRTRALDGGAILLAKALDAESVVHDEEGSLLRLDDGTRVRARFLLDCSGYQSRLVTLDG--THDPGVQIAYGIECEV--DMCPYGEDAMTLMDYRTDYLDNQAAEVQMTAAREPTFMYAMPMGPTRDGKKTRVFFEETSLVARPPMSFDECKKRMELRLKYLGATVLSVEEEEFCYIPMGGAIPVRSQRVVAFGGAMGLVHAATGYQICRSMAAAGPTAKAIADEL 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1942.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YM92_9STRA1.660e-13462.58Lycopene beta cyclase chloroplast n=1 Tax=Tribonem... [more]
A0A290WNI4_PETFA5.320e-13456.81Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae Tax... [more]
A0A290WNJ8_9PHAE1.760e-13356.33Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxI... [more]
A0A6H5JIL6_9PHAE7.990e-13357.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A290WNK2_9PHAE1.510e-13255.38Lycopene beta-cyclase n=1 Tax=Saccharina sculpera ... [more]
A0A290WNK0_9PHAE1.770e-13259.38Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015... [more]
A0A290WNI7_UNDPI2.600e-13059.64Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida ... [more]
A0A290WNI6_9PHAE9.280e-13057.95Lycopene beta-cyclase n=1 Tax=Punctaria latifolia ... [more]
A0A290WNJ9_9PHAE3.320e-12556.62Lycopene beta-cyclase n=1 Tax=Dictyopteris undulat... [more]
A0A4D9D3Z6_9STRA7.900e-11755.93Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1942contigP-wetherbeei_contig1942:5265..6413 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LTG3
Preferred nameLCYB
PFAMsLycopene_cycl
Model size1149
Max annot lvl2759|Eukaryota
KEGG rclassRC01004,RC01612,RC01964,RC02020,RC02021
KEGG koko:K06443,ko:K06444,ko:K14593
KEGG ReactionR03824,R04801,R05341,R06960,R06962,R06963,R07320,R07321,R07840,R07856
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009509,GO:0009536,GO:0009975,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016853,GO:0016860,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045436,GO:0046148,GO:0071704,GO:1901576
Exons1
Evalue3.52e-133
EggNOG OGs2CN09@1|root,2QT2F@2759|Eukaryota
Ec32 ortholog descriptionLycopene cyclase
Ec32 orthologEc-02_005510.1
EC5.3.99.8,5.5.1.18,5.5.1.19
Descriptiontetraterpenoid biosynthetic process
Cds size1149
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186171.8702767-CDS-P-wetherbeei_contig1942:5264..64131683186171.8702767-CDS-P-wetherbeei_contig1942:5264..6413Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1942 5265..6413 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1942.6.1prot_P-wetherbeei_contig1942.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1942 5265..6413 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1942.6.1

>prot_P-wetherbeei_contig1942.6.1 ID=prot_P-wetherbeei_contig1942.6.1|Name=mRNA_P-wetherbeei_contig1942.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=383bp
MAFDFTSLGSWLGGGWGSKKDDAGSDFDVVVIGSGPAGAVMATLLAEKSG
LRVAIVDPNLRKRWVPNYGVWLEEWEKLESRLQIGLDECLDRTWPVTDCF
YGGSHGVPLNERLRIERPYARVSRGKFKAHLTSRMAKAGVMAIEKAADPG
SVVHTTAGSQLRLADGKLLRTRMIVDSSGFDNRLTAREPGMRDDPGFQIA
YGIECEVAGDLGPYDPEAMLFMDYRTDFAASPEEAAGLSKEPTFMYIMPL
GRSAGGKQRVFFEETSLVARPPMTFDECRRRMYRRLAHLGIEVTKVEDEE
FCRIPMGSALPAVDQRIVAFGAAAGLVHAATGYQMVRMLAAAGGVADALA
AELGGPRGAAELAAVAAGGAAWRSWRGSTRTGR
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mRNA from alignment at P-wetherbeei_contig1942:5265..6413+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1942.6.1 ID=mRNA_P-wetherbeei_contig1942.6.1|Name=mRNA_P-wetherbeei_contig1942.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig1942:5265..6413+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTTTGACTTCACGAGTCTTGGGTCATGGCTCGGCGGAGGCTGGGG AAGTAAGAAGGACGACGCAGGAAGTGACTTCGACGTCGTCGTCATTGGTT CCGGGCCGGCCGGCGCCGTCATGGCGACGCTTCTGGCGGAGAAGAGTGGT TTACGAGTGGCAATCGTCGACCCCAACCTCCGGAAACGCTGGGTTCCCAA CTACGGCGTGTGGTTGGAAGAGTGGGAGAAGCTGGAAAGCCGACTGCAAA TCGGCCTGGACGAGTGCTTGGACCGGACATGGCCCGTCACCGACTGCTTT TACGGCGGCAGCCACGGCGTGCCGCTCAACGAGCGCCTGCGTATCGAGCG GCCCTATGCCCGCGTGAGCCGAGGGAAGTTCAAGGCACACCTCACGTCCC GCATGGCAAAGGCCGGCGTCATGGCCATCGAGAAGGCCGCCGACCCGGGC AGCGTCGTCCACACCACCGCTGGCTCGCAGCTGCGCCTCGCCGACGGCAA GCTGCTTCGCACACGCATGATTGTCGATTCCTCTGGCTTCGACAACCGCC TGACGGCCCGTGAGCCCGGCATGCGCGACGATCCGGGTTTCCAGATCGCC TACGGCATCGAGTGCGAAGTCGCCGGTGACCTGGGGCCGTACGACCCGGA GGCGATGCTGTTCATGGACTACCGCACCGACTTTGCAGCGTCGCCTGAGG AGGCAGCAGGGCTGAGCAAGGAGCCCACCTTCATGTACATCATGCCGCTT GGGCGGTCGGCGGGCGGTAAGCAGCGGGTCTTCTTCGAGGAAACGTCGCT GGTGGCGCGGCCGCCGATGACGTTCGACGAGTGCCGCCGGCGCATGTACC GCCGGCTCGCTCACCTCGGAATCGAGGTCACCAAGGTTGAGGACGAGGAG TTCTGCCGCATCCCGATGGGCAGCGCGCTGCCGGCCGTCGACCAACGGAT CGTGGCGTTCGGCGCCGCAGCGGGGCTGGTGCACGCCGCGACTGGCTATC AGATGGTGCGCATGCTGGCGGCGGCCGGTGGCGTCGCCGACGCGCTCGCG GCGGAGCTGGGGGGCCCACGGGGCGCCGCGGAGCTGGCGGCGGTGGCGGC GGGGGGGGCGGCGTGGCGGAGCTGGAGGGGTTCGACCCGGACCGGGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1942:5265..6413+

>mRNA_P-wetherbeei_contig1942.6.1 ID=mRNA_P-wetherbeei_contig1942.6.1|Name=mRNA_P-wetherbeei_contig1942.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig1942:5265..6413+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTTTGACTTCACGAGTCTTGGGTCATGGCTCGGCGGAGGCTGGGG
AAGTAAGAAGGACGACGCAGGAAGTGACTTCGACGTCGTCGTCATTGGTT
CCGGGCCGGCCGGCGCCGTCATGGCGACGCTTCTGGCGGAGAAGAGTGGT
TTACGAGTGGCAATCGTCGACCCCAACCTCCGGAAACGCTGGGTTCCCAA
CTACGGCGTGTGGTTGGAAGAGTGGGAGAAGCTGGAAAGCCGACTGCAAA
TCGGCCTGGACGAGTGCTTGGACCGGACATGGCCCGTCACCGACTGCTTT
TACGGCGGCAGCCACGGCGTGCCGCTCAACGAGCGCCTGCGTATCGAGCG
GCCCTATGCCCGCGTGAGCCGAGGGAAGTTCAAGGCACACCTCACGTCCC
GCATGGCAAAGGCCGGCGTCATGGCCATCGAGAAGGCCGCCGACCCGGGC
AGCGTCGTCCACACCACCGCTGGCTCGCAGCTGCGCCTCGCCGACGGCAA
GCTGCTTCGCACACGCATGATTGTCGATTCCTCTGGCTTCGACAACCGCC
TGACGGCCCGTGAGCCCGGCATGCGCGACGATCCGGGTTTCCAGATCGCC
TACGGCATCGAGTGCGAAGTCGCCGGTGACCTGGGGCCGTACGACCCGGA
GGCGATGCTGTTCATGGACTACCGCACCGACTTTGCAGCGTCGCCTGAGG
AGGCAGCAGGGCTGAGCAAGGAGCCCACCTTCATGTACATCATGCCGCTT
GGGCGGTCGGCGGGCGGTAAGCAGCGGGTCTTCTTCGAGGAAACGTCGCT
GGTGGCGCGGCCGCCGATGACGTTCGACGAGTGCCGCCGGCGCATGTACC
GCCGGCTCGCTCACCTCGGAATCGAGGTCACCAAGGTTGAGGACGAGGAG
TTCTGCCGCATCCCGATGGGCAGCGCGCTGCCGGCCGTCGACCAACGGAT
CGTGGCGTTCGGCGCCGCAGCGGGGCTGGTGCACGCCGCGACTGGCTATC
AGATGGTGCGCATGCTGGCGGCGGCCGGTGGCGTCGCCGACGCGCTCGCG
GCGGAGCTGGGGGGCCCACGGGGCGCCGCGGAGCTGGCGGCGGTGGCGGC
GGGGGGGGCGGCGTGGCGGAGCTGGAGGGGTTCGACCCGGACCGGGCGG
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